EY684497

Overview
NameEY684497
Unique NameEY684497
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684497 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.974e-28
Identity = 47/82 (57.32%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  220 DSWFRCDKLPLP*N*AHKFLML*GSFVWSHGATLGYALAC*NNRVIACVGEGSFVVIATEISAMIR*GQRIIMFLIKQVGDT 465
            DSWF C KL LP    ++F M  GS  WS GATLGYA A    RVIAC+G+GSF V A +IS M+R GQR I+FLI   G T
Sbjct:  337 DSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQAAPEKRVIACIGDGSFQVTAQDISTMLRCGQRTIIFLINNGGYT 418          

HSP 2 Score: 55.8398 bits (133), Expect = 2.974e-28
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 3
Query:    3 PSLGWVFVGDILGALDKKLRRSTTSLENYRRIYVPPGIPLIRVHKDPLRIYGLFRYIQ 176
            P+ G V + D L AL K+L+ + T+ ENY RIYVP G PL    K+ LR+  LF++IQ
Sbjct:  265 PAFGCVLMRDFLAALAKRLKHNPTAFENYHRIYVPEGHPLKCEPKEALRVNVLFQHIQ 322          
BLAST of EY684497 vs. ExPASy Swiss-Prot
Match: PDC3_MAIZE (Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea mays GN=PDC3 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.285e-22
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 1
Query:  220 DSWFRCDKLPLP*N*AHKFLML*GSFVWSHGATLGYALAC*NNRVIACVGEGSFVVIATEISAMIR*GQRIIMFLIKQVGDTLEGEIPEGP*NVIRNWNYSGLRKALHN 546
            DSWF C KL LP    ++F M  GS  WS GA LGY     + RVIA +G+GSF V A ++S ++R  Q  I+FLI   G T+E EI +GP NVI+NWNY+G   A+HN
Sbjct:   30 DSWFNCQKLKLPEGCGYEFQMQYGSIGWSVGALLGYPQGANHKRVIAFIGDGSFQVTAQDVSTILRCEQNSIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGFVDAIHN 138          
BLAST of EY684497 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.896e-14
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  220 DSWFRCDKLPLP*N*AHKFLML*GSFVWSHGATLGYALAC*NNRVIACVGEGSFVVIATEISAMIR*GQRIIMFLIKQVGDTLEGEIPEGP*NVIRNWNYSGLRKALH 543
            DSWF   ++ LP     ++ M  G   WS  A  GYA+     R I  VG+GSF + A E++ M+R    +I+FLI   G T+E  I +GP N I+NW+Y+GL +  +
Sbjct:  390 DSWFNAQRMKLPNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFN 497          
BLAST of EY684497 vs. ExPASy Swiss-Prot
Match: PDC3_SCHPO (Probable pyruvate decarboxylase C186.09 OS=Schizosaccharomyces pombe GN=SPAC186.09 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.860e-13
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 1
Query:  211 DLEDSWFRCDKLPLP*N*AHKFLML*GSFVWSHGATLGYALAC*NNRVIACVGEGSFVVIATEISAMIR*GQRIIMFLIKQVGDTLEGEIPEGP*NVIRNWNYSGLRKALH 543
            D  DSWF   ++ LP     +  M  G   WS  +  GYA+      V+  VG+GSF     E+S M+R    IIMFLI   G T+E EI +GP N I+NW+Y+ + +A +
Sbjct:  397 DTGDSWFGGMRITLPEKARFEIEMQWGHIGWSVPSAFGYAIGAPKRNVVVFVGDGSFQETVQEVSQMVRLNLPIIMFLINNRGYTIEVEIHDGPYNRIKNWDYAAIVEAFN 507          
BLAST of EY684497 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  211 DLEDSWFRCDKLPLP*N*AHKFLML*GSFVWSHGATLGYALAC*NNRVIACVGEGSFVVIATEISAMIR*GQRIIMFLIKQVGDTLEGEIPEGP*NVIRNWNYSGLRKALHN 546
            D  DSWF   +L LP     +  M  G   WS  A  GYAL   +   I  VG+GSF V A E+S M+R    I + LI   G T+E EI +G  N I+NW+Y+ L +A ++
Sbjct:  391 DTGDSWFNGIQLKLPPGAKFEIEMQWGHIGWSIPAAFGYALRHPDRHTIVLVGDGSFQVTAQEVSQMVRFKVPITIMLINNRGYTIEVEIHDGSYNKIKNWDYAMLVEAFNS 502          
BLAST of EY684497 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.509e-12
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 1
Query:  193 TLHQSTDLEDSWFRCDKLPLP*N*AHKFLML*GSFVWSHGATLGYALAC*NNRVIACVGEGSFVVIATEISAMIR*GQRIIMFLIKQVGDTLEGEIPEGP*NVIRNWNYSGLRKALH 543
            TL+  T   DSWF   ++ LP     +  M  G   WS  + +GYA+A    R I  VG+GSF +   EIS MIR    +++FL+   G T+E +I +GP N I+NW+++   ++L+
Sbjct:  389 TLYAETG--DSWFNGLQMKLPAGAKFEVEMQWGHIGWSVPSAMGYAVAAPERRTIVMVGDGSFQLTGQEISQMIRHKLPVLIFLLNNRGYTIEIQIHDGPYNRIQNWDFAAFCESLN 503          
The following BLAST results are available for this feature:
BLAST of EY684497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PDC1_TOBAC2.974e-2857.32Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]
PDC3_MAIZE1.285e-2250.46Pyruvate decarboxylase isozyme 3 (Fragment) OS=Zea... [more]
PDC_ZYMMO4.896e-1438.89Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
PDC3_SCHPO1.860e-1338.74Probable pyruvate decarboxylase C186.09 OS=Schizos... [more]
PDC_NEUCR3.509e-1240.18Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
PDC2_SCHPO3.509e-1236.75Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-G04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684497 ID=EY684497; Name=EY684497; organism=Citrus sinensis; type=EST; length=992bp
CTCCCTCCCTTGGCTGGGTTTTCGTGGGTGACATCTTAGGTGCATTGGAT
AAGAAACTCAGGAGGAGCACTACATCGCTAGAAAATTACCGACGAATATA
TGTCCCTCCAGGAATTCCCCTGATCCGTGTGCACAAAGATCCTCTTCGAA
TCTATGGACTCTTCCGATACATTCAGGACCTGCTGAGTGCAGACTCTGCA
TCAATCGACTGATCTGGAAGACTCTTGGTTTAGGTGTGACAAACTCCCCC
TCCCCTAGAATTGAGCACATAAATTTCTTATGCTATAAGGATCCTTTGTC
TGGTCGCATGGTGCCACCCTAGGATATGCTCTCGCTTGCTAGAATAACCG
GGTGATTGCTTGCGTTGGAGAAGGAAGTTTCGTTGTAATTGCTACCGAAA
TATCTGCGATGATTCGATGAGGACAAAGGATCATCATGTTCCTTATCAAA
CAGGTGGGGGATACCCTCGAAGGAGAAATTCCTGAAGGGCCTTAGAATGT
GATTAGGAACTGGAATTATTCTGGCCTGAGAAAAGCACTCCACAATGCGA
AAAGGATAATGACTGACTGCCACCGTTAAGAAAAATAACATTGGGGTGTG
TTTGCTTAGGTTTTTATGGGAGCAAGTGGAATATTCCTCAATTTTCCCAA
GGAAAAATGTGGTTAACAAATTTACAATTCCCTTCTTGGCGCCCGGCCAT
TTTTCTTTGTGTTCATCTATTATTTAGGTTATCCCCAAAACCTGGTCCAG
GAATGTTCCCAAGAATTTTTGCTCTTCCTTTGGGAATTGCTAAGTTTTCC
CTCGAAATTTTTGTTTTTCTTTCTTTTGAAATAATCCTTTTTATCCTATA
GATTTTTTCCCACAAAGGTTTTTTTCTCTTAATCATTTGGAGAAAAAAGG
ACAAAAAAAAGGGGGTAATTTTTCTCTTTTTCTTATTGTGCGTCGGATGT
TTTTTTTTATAAACAACACCCGCGGGCCGCCGCGGGGAAGGA
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