EY684463

Overview
NameEY684463
Unique NameEY684463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length998
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY684463 vs. ExPASy Swiss-Prot
Match: KIC1_YEAST (Serine/threonine-protein kinase KIC1 OS=Saccharomyces cerevisiae GN=KIC1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.723e-11
Identity = 46/156 (29.49%), Postives = 81/156 (51.92%), Query Frame = 2 
Query:    2 DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVND-KIDVYAFGVVLLELLTGRKPISNDHPKGQESLVMWAKP 466
            D +L ++ +  + GSL   L   K D    G   R  +      AL+ +H  +   VIHRD+K++N+L++++   +L DFG+A  A  + + +    +AGT  ++APE  M G   D K+D+++ G+   E+ TG  P  +        L++ +KP
Sbjct:   92 DTSLWIIMEHCAGGSLRSLLRPGKIDEKYIGVIMRELLV-----ALKCIHKDN---VIHRDIKAANVLITNEGNVKLCDFGVA--AQVNQTSLRRQTMAGTPYWMAPEVIMEGVYYDTKVDIWSLGITTYEIATGNPPYCDVEALRAMQLIIKSKP 237
[Close]
BLAST of EY684463 vs. ExPASy Swiss-Prot
Match: AURK_DICDI (Probable serine/threonine-protein kinase aurK OS=Dictyostelium discoideum GN=aurK PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.723e-11
Identity = 42/144 (29.17%), Postives = 68/144 (47.22%), Query Frame = 2 
Query:    2 DNNLLLVYDFLSRGSLEENLHGNKKDPAAFGWSERYKVAMGVAEALEYLHSGSAQRVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISNDHPK 433
            D  + L+ +F   G   + L    +   +F         + +A+AL Y HS   + VIHRD+K  N+L+    E +++DFG +  A  +     C    GT  YL PE       +   DV++ G+++ E L GR P ++D  K
Sbjct:  180 DKRVFLIIEFAKGGECFKEL----QKVGSFNEQTAATYTLQIADALRYCHS---KHVIHRDIKPENLLIGVGGEIKIADFGWSVHAPNTKRSTFC----GTLEYLPPEVIEKKGYDQTADVWSLGILIFEFLVGRSPFTSDEEK 312
The following BLAST results are available for this feature:
BLAST of EY684463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 462
Match NameE-valueIdentityDescription
KIC1_YEAST8.723e-1129.49Serine/threonine-protein kinase KIC1 OS=Saccharomy... [more]
AURK_DICDI8.723e-1129.17Probable serine/threonine-protein kinase aurK OS=D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-055-D03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684463 ID=EY684463; Name=EY684463; organism=Citrus sinensis; type=EST; length=998bp
GGACAATAACCTGCTCTTGGTTTATGATTTCCTCTCAAGGGGAAGCCTAG
AAGAGAACCTTCATGGTAATAAGAAAGACCCGGCTGCATTTGGTTGGAGT
GAGAGATATAAGGTGGCTATGGGGGTGGCCGAAGCTCTTGAATATCTCCA
CAGTGGCAGTGCTCAACGTGTGATCCACAGGGATGTTAAATCATCAAATA
TATTACTGTCAGATGACTTCGAGCCACAGCTATCTGATTTTGGACTTGCC
AAGTGGGCATCAACCTCCTCATCTCATATAACCTGCACCGATGTTGCGGG
AACCTTTGGCTACCTGGCTCCCGAGTACTTCATGTATGGAAAAGTAAATG
ACAAGATTGATGTCTATGCATTTGGTGTTGTACTCCTTGAGCTTCTCACT
GGAAGGAAGCCTATAAGCAACGATCATCCAAAAGGCCAAGAGAGCCTAGT
CATGTGGGCAAAGCCAATTCTGAGCAATGGGAAGGTTACCCAGTTGTTAG
ATCCAGCCTTGGGCAACAACCTATGACTATGACCAGATGGAAAGAATGGT
TTTAGCATCTATTCTCTGTATCAAGCGTGAACCCCTCCAACTAGGCCTCA
AATGAACCCTTGGTTTTGAACCTCCCTCCCAAGGTGAAGCTGGAATGGAA
CCAATTGGGGCAGGGTTTACAATTAAATGGCCTTTCAAAAAAAAACCTAA
AATGGTGGGAGAAAGGAATCTTGGCCCCCCTTTCTAAACCCCCCAACCCC
CATCTTAATCTTTGGATTTACTTTGGAGGGGGAAGAATGGAATTTCTTTC
TTCCCTGAACCCGCCTTTTGAAACAAAAGGGGTTTCTCATTTAAAGGGAA
CACACTTTGTGCAAGGAAAGGGGGGGAGCCCCCTTTCCTTCTCCGCCTTT
TTAACAGTGGAACCCAATTTTAATGTGGGTTTTATAAACCTCCAGAGTGA
AAAAAAGAACCTTATCCCCCCTCCGCGGAGGTGGGGGTCTTCTTTTTT
back to top