EY684381

Overview
NameEY684381
Unique NameEY684381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.034e-62
Identity = 104/125 (83.20%), Postives = 112/125 (89.60%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFES 465
            MGKEK H++IVVIGHVDSGKSTTTGHLIYK GGI+KR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET KY  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FE+
Sbjct:    1 MGKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIEKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETEKYSFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEA 125          

HSP 2 Score: 33.113 bits (74), Expect = 7.034e-62
Identity = 14/18 (77.78%), Postives = 18/18 (100.00%), Query Frame = 2
Query:  461 KAGISKDGQTREHALLAF 514
            +AGIS++GQTREHALLA+
Sbjct:  124 EAGISQNGQTREHALLAY 141          

HSP 3 Score: 31.9574 bits (71), Expect = 7.034e-62
Identity = 26/55 (47.27%), Postives = 31/55 (56.36%), Query Frame = 3
Query:  507 LLSTLGVKQDDFAACNKMDPTTPQVFKGLRYEE-NCEGRLFPT*KRLGYNPRKSP 668
            L  TLGVKQ    ACNKMD       +  RYEE + E  L+   K++GYNP K P
Sbjct:  139 LAYTLGVKQM-IVACNKMDDKNVNWSQD-RYEEVSKEMDLYL--KKVGYNPAKVP 189          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_DANRE (Elongation factor 1-alpha OS=Danio rerio GN=eef1a PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.566e-61
Identity = 130/203 (64.04%), Postives = 148/203 (72.91%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+    G FE+   +           F   V  K +++ V K     P YS+    ++I KE S+  +K G++  P  V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSQA-RFEEITKEVSAYIKKIGYN--PASVAFVPISGWHG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_CHICK (Elongation factor 1-alpha 1 OS=Gallus gallus GN=EEF1A PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A_BOMMO (Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 131/203 (64.53%), Postives = 149/203 (73.40%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FE+   +           F   V  K +++ V K     P YS+    ++I KE SS  +K G++  P  V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEP-RFEEIKKEVSSYIKKIGYN--PAAVAFVPISGWHG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A3_HUMAN (Putative elongation factor 1-alpha-like 3 OS=Homo sapiens GN=EEF1AL3 PE=5 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A1_RAT (Elongation factor 1-alpha 1 OS=Rattus norvegicus GN=Eef1a1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A1_RABIT (Elongation factor 1-alpha 1 OS=Oryctolagus cuniculus GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A1_PONAB (Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF1A1 PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A1_PANTR (Elongation factor 1-alpha 1 OS=Pan troglodytes GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
BLAST of EY684381 vs. ExPASy Swiss-Prot
Match: EF1A1_MOUSE (Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef1a1 PE=1 SV=3)

HSP 1 Score: 236.113 bits (601), Expect = 2.045e-61
Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   91 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFESWYLQGWSDS*ACFACFPPLV*SKMILLPVTKWTPPPPKYSKG*GTKKIVKEGSSLPEK-GWDTTPEKVPFLPFPGFPG 696
            MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDI+LWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ +  G FE+   +           +   V  K +++ V K     P YS+    ++IVKE S+  +K G++  P+ V F+P  G+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGV--KQLIVGVNKMDSTEPPYSQK-RYEEIVKEVSTYIKKIGYN--PDTVAFVPISGWNG 198          
The following BLAST results are available for this feature:
BLAST of EY684381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PORYE7.034e-6283.20Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_DANRE1.566e-6164.04Elongation factor 1-alpha OS=Danio rerio GN=eef1a ... [more]
EF1A_CHICK2.045e-6163.55Elongation factor 1-alpha 1 OS=Gallus gallus GN=EE... [more]
EF1A_BOMMO2.045e-6164.53Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1[more]
EF1A3_HUMAN2.045e-6163.55Putative elongation factor 1-alpha-like 3 OS=Homo ... [more]
EF1A1_RAT2.045e-6163.55Elongation factor 1-alpha 1 OS=Rattus norvegicus G... [more]
EF1A1_RABIT2.045e-6163.55Elongation factor 1-alpha 1 OS=Oryctolagus cunicul... [more]
EF1A1_PONAB2.045e-6163.55Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF... [more]
EF1A1_PANTR2.045e-6163.55Elongation factor 1-alpha 1 OS=Pan troglodytes GN=... [more]
EF1A1_MOUSE2.045e-6163.55Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-D09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684381 ID=EY684381; Name=EY684381; organism=Citrus sinensis; type=EST; length=893bp
CCCACGCGTCCGTCTCAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTC
GCGAATATCATTTTAATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGG
AGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAG
TCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCG
TGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCAT
TCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGT
ATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTG
CACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTA
CCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATTGACTCTACCACT
GGTGGTTTTGAAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATG
CTTTGCTTGCTTTCCACCCTTGGTGTGAAGCAAGATGATTTTGCTGCCTG
TAACAAAATGGACCCCACCACCCCCCAAGTATTCAAAGGGCTAAGGTACG
AAGAAAATTGTGAAGGAAGGCTCTTCCCTACCTGAAAAAGGTTGGGATAC
AACCCCCGAAAAAGTCCCATTTCTGCCCTTCCCTGGGTTTCCAGGGTGGA
CAACCTTGAATTGAAAGGTCTAACCCCCCCTGGACGGGGACCAGGGGTCA
AACCCTGCTGGAGACCTCTTTGAACAAATTAATAGGACCCAAAAAAGGCC
CCCCAAAAAAACCCCCCTTCCCTTTGGCCCCCCCCCAGAAAGTGGGAAAA
AAAATTGGGGGGGGGATTGGGGACCCCCCCCCCCCAGGGGGGG
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