EY684372

Overview
NameEY684372
Unique NameEY684372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_AZOPC (ATP phosphoribosyltransferase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=hisG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 44/133 (33.08%), Postives = 82/133 (61.65%), Query Frame = 1
Query:   40 SEFGQGNEDLIIVHDALDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTADGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRK 438
            +EF +  ++ I++   L +  CRLSLAIPK   +  ++          W  +K  ++AT +  +   F+K N ++  +    +G++E +P +G++DAI D+VSSG+TL  N+LKE+E  +V+ S+A+L++++K
Sbjct:   70 NEFHEKKQEAIVIKQ-LGFSHCRLSLAIPKEEEYPGLH----------WFFKK--KIATSYPKILSAFLKKNAIEADIHFI-NGSVEISPGIGLSDAIFDIVSSGSTLISNHLKEVE--IVMYSEAILISNKK 186          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_ALISL (ATP phosphoribosyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=hisG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 52/129 (40.31%), Postives = 72/129 (55.81%), Query Frame = 1
Query:   88 LDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRKSLIRRKGVLD 468
            LD+G CRLS+AI K  ++            PQ  A K  R+AT +S L   FM +   K++ FST   +G++E AP  G++DAI DLVS+G TL  N LKE E         V+  S+ +LI+R+G  D
Sbjct:   98 LDFGGCRLSIAIDKDAVYNG----------PQDLAGK--RIATTYSQLLKSFMDE---KNIPFSTCILNGSVEVAPRAGLSDAIADLVSTGATLEANGLKEAE---------VIFRSKATLIQREGEFD 202          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_BUCAT (ATP phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=hisG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 1
Query:   52 QGNEDLIIVHDALDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLV 426
            Q +E   I    LD+G CRLSLA+P   I+ NI  L            K +R+AT + +L  K++ +   K++ F +   +G++E AP  G+ADAI DLVS+G TL  N L+E++  VV  S A L+
Sbjct:   87 QKSECSYITLRRLDFGVCRLSLALPVNTIYTNITCL------------KNIRIATSYPHLLKKYLDE---KNISFKSCMLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVQ--VVYHSHACLI 196          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_BUCAI (ATP phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=hisG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 1
Query:   52 QGNEDLIIVHDALDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLV 426
            Q +E   I    LD+G CRLSLA+P   I+ NI  L            K +R+AT + +L  K++ +   K++ F +   +G++E AP  G+ADAI DLVS+G TL  N L+E++  VV  S A L+
Sbjct:   87 QKSECSYITLRRLDFGVCRLSLALPVNTIYTNITCL------------KNIRIATSYPHLLKKYLDE---KNISFKSCMLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVQ--VVYHSHACLI 196          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_BUCA5 (ATP phosphoribosyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=hisG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 1
Query:   52 QGNEDLIIVHDALDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLV 426
            Q +E   I    LD+G CRLSLA+P   I+ NI  L            K +R+AT + +L  K++ +   K++ F +   +G++E AP  G+ADAI DLVS+G TL  N L+E++  VV  S A L+
Sbjct:   87 QKSECSYITLRRLDFGVCRLSLALPVNTIYTNITCL------------KNIRIATSYPHLLKKYLDE---KNISFKSCMLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVQ--VVYHSHACLI 196          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_VIBFM (ATP phosphoribosyltransferase OS=Vibrio fischeri (strain MJ11) GN=hisG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 56/147 (38.10%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   88 LDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRKSLIRRKGVLDP-----THEILERFGGLI 507
            LD+G CRLS+AI K  ++            PQ  A K  R+AT +  L   FM + G+    FST   +G++E AP  G+ADAI DLVS+G TL  N LKE E         V+  S+ +LI+R+G  D       +++L R  G I
Sbjct:   98 LDFGGCRLSIAIDKDEVYNG----------PQDLAGK--RIATTYPQLLKSFMDEQGIP---FSTCILNGSVEVAPRAGLADAIADLVSTGATLEANGLKEAE---------VIFRSKATLIQREGEFDADKAALINKLLTRMQGCI 220          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_VIBF1 (ATP phosphoribosyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=hisG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 56/147 (38.10%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   88 LDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRKSLIRRKGVLDP-----THEILERFGGLI 507
            LD+G CRLS+AI K  ++            PQ  A K  R+AT +  L   FM + G+    FST   +G++E AP  G+ADAI DLVS+G TL  N LKE E         V+  S+ +LI+R+G  D       +++L R  G I
Sbjct:   98 LDFGGCRLSIAIDKDEVYNG----------PQDLAGK--RIATTYPQLLKSFMDEQGIP---FSTCILNGSVEVAPRAGLADAIADLVSTGATLEANGLKEAE---------VIFRSKATLIQREGEFDADKAALINKLLTRMQGCI 220          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_ACTPJ (ATP phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=hisG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   88 LDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRKSLIRRKGVLDPTHEILERFGGL 504
            LD+G CRLSLAI +   +   N +++ V           R+AT +  L  ++M + G   V F +   +G++E AP+ G+ADAI DLVSSG TL  N LKE+E  V+ +S+A L+   + L   K  L     +L R  G+
Sbjct:   99 LDFGGCRLSLAIDRDRTY---NGVQDFVNS---------RIATSYPNLLKRYMNEKG---VAFKSTLLNGSVEVAPSAGLADAICDLVSSGATLEANGLKEVE--VIYQSKACLIQRAEPLSTEKQAL--VDRLLTRIQGV 220          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_ACTP7 (ATP phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=hisG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   88 LDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRKSLIRRKGVLDPTHEILERFGGL 504
            LD+G CRLSLAI +   +   N +++ V           R+AT +  L  ++M + G   V F +   +G++E AP+ G+ADAI DLVSSG TL  N LKE+E  V+ +S+A L+   + L   K  L     +L R  G+
Sbjct:   99 LDFGGCRLSLAIDRDRTY---NGVQDFVNS---------RIATSYPNLLKRYMNEKG---VAFKSTLLNGSVEVAPSAGLADAICDLVSSGATLEANGLKEVE--VIYQSKACLIQRAEPLSAEKQAL--VDRLLTRIQGV 220          
BLAST of EY684372 vs. ExPASy Swiss-Prot
Match: HIS1_ACTP2 (ATP phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=hisG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   88 LDYGDCRLSLAIPKYGIFENINSLRELVQMPQWTAEKPLRVATGFSYLGPKFMKDNGLKHVVFSTA--DGALEAAPAMGIADAILDLVSSGTTLRENNLKEIEGGVVLESQAVLVASRKSLIRRKGVLDPTHEILERFGGL 504
            LD+G CRLSLAI +   +   N +++ V           R+AT +  L  ++M + G   V F +   +G++E AP+ G+ADAI DLVSSG TL  N LKE+E  V+ +S+A L+   + L   K  L     +L R  G+
Sbjct:   99 LDFGGCRLSLAIDRDRTY---NGVQDFVNS---------RIATSYPNLLKRYMNEKG---VAFKSTLLNGSVEVAPSAGLADAICDLVSSGATLEANGLKEVE--VIYQSKACLIQRAEPLSTEKQAL--VDRLLTRIQGV 220          
The following BLAST results are available for this feature:
BLAST of EY684372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
HIS1_AZOPC1.052e-1233.08ATP phosphoribosyltransferase OS=Azobacteroides ps... [more]
HIS1_ALISL1.052e-1240.31ATP phosphoribosyltransferase OS=Aliivibrio salmon... [more]
HIS1_BUCAT1.374e-1238.58ATP phosphoribosyltransferase OS=Buchnera aphidico... [more]
HIS1_BUCAI1.374e-1238.58ATP phosphoribosyltransferase OS=Buchnera aphidico... [more]
HIS1_BUCA51.374e-1238.58ATP phosphoribosyltransferase OS=Buchnera aphidico... [more]
HIS1_VIBFM2.343e-1238.10ATP phosphoribosyltransferase OS=Vibrio fischeri (... [more]
HIS1_VIBF12.343e-1238.10ATP phosphoribosyltransferase OS=Vibrio fischeri (... [more]
HIS1_ACTPJ3.060e-1236.88ATP phosphoribosyltransferase OS=Actinobacillus pl... [more]
HIS1_ACTP73.060e-1236.88ATP phosphoribosyltransferase OS=Actinobacillus pl... [more]
HIS1_ACTP23.060e-1236.88ATP phosphoribosyltransferase OS=Actinobacillus pl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-052-C07-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684372 ID=EY684372; Name=EY684372; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGTTAGTGAATTTGG
ACAGGGAAATGAAGACCTTATTATTGTTCATGATGCTCTTGACTATGGGG
ATTGCCGTTTATCACTTGCAATTCCAAAATATGGGATCTTTGAGAATATC
AATTCACTGAGGGAGCTAGTGCAAATGCCTCAATGGACTGCTGAGAAACC
TCTGCGGGTTGCTACTGGCTTCAGTTATCTGGGCCCTAAGTTTATGAAGG
ATAATGGACTGAAGCATGTAGTCTTTTCAACTGCTGATGGAGCCCTAGAG
GCAGCTCCAGCTATGGGGATTGCTGATGCTATTTTGGACCTTGTGAGTAG
TGGAACAACACTTAGAGAGAACAACTTGAAAGAAATTGAAGGTGGAGTTG
TGTTGGAAAGCCAGGCTGTTCTTGTTGCAAGCAGGAAATCATTGATCCGG
CGGAAAGGAGTTCTAGACCCCACACACGAGATTCTTGAAAGATTTGGAGG
GCTCATTTGAGGGCAAGTGGGTCAGTTCAACGGTTACTGCAAACCTGAGG
GGGAAATAACGCAGAAGAAATAACAAAACCGAATAACTGGAGCCAAACTT
CGTTTTCTGGGGTTTGCCAGGGACCCCCCTGAAAGTCCCAGTTTTTTTTG
CCAACGTGGAAGGGGAAGGGGGAAACCTGGAATTATATTGCCTAGTTTAA
GGTGTTCCCCAGAAAAGCACTATACAAGTCTGTACACACAGTTTAGAGCC
AATTGGAAGGAAGGGGGGGTTCTAACCCTCCCCTTTTAACCTACATTTTC
CAAAAAGGAAAAAACTCCCAGGGGGGGGGGGGGCTTTTCCCTACAAACCC
GGGGTTTAAAAGTCCCTCCGGCCTTTTTCCCTTACAAAAGGGAAACTTTA
AGGC
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