EY684207

Overview
NameEY684207
Unique NameEY684207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_STRGN (60 kDa chaperonin OS=Streptococcus gordonii GN=groL PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.974e-35
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372
            +E +AKLS  VAVIKVGAAT+T L++ KLRIEDA NAT AA+EEGIV GGG A V + D V  ++      D+  G +IV +AL  P   I+ NAG E  +V++ +K+SE  TG+ A T +
Sbjct:  364 QERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTAFVSVLDAVAGLE---LTGDEATGRNIVLRALEEPVRQIALNAGFEGSIVIDRLKNSEAGTGFNAATGE 481          

HSP 2 Score: 64.3142 bits (155), Expect = 2.974e-35
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQNTRNRSAPRSYGG 544
            ++ NM++AGIIDP KVTRSALQNAASVA ++LTT+A+V  +P+  +      P   GG
Sbjct:  481 EWVNMIEAGIIDPVKVTRSALQNAASVASLILTTEAVVANQPEPASPAPAMDPSMMGG 538          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.874e-35
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAM 363
            +E +AKL+  VAVIKVGAAT+T L++RKLRIEDA  AT AA+EEGIVPGGG A +++   V  +   ++D +  LG  I+ K+L  P   I+ NAGVE  V++E VK+SE  TGY A+
Sbjct:  364 QERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYINVIKEVEKLTSDVQDTE--LGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGTGYDAL 479          

HSP 2 Score: 57.3806 bits (137), Expect = 3.874e-35
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQ 505
            KY NM+++GI+DP KVTRSALQNAASV+   LTT+A V + P+ +
Sbjct:  482 KYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKE 526          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.874e-35
Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAM 363
            +E +AKL+  VAVIKVGAAT+T L++RKLRIEDA  AT AA+EEGIVPGGG A +++ + V  +   ++D +  LG  I+ K+L  P   I+ NAGVE  V++E VK+SE  TGY A+
Sbjct:  364 QERLAKLAGGVAVIKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYINVINAVEKLTSDVQDTE--LGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGTGYDAL 479          

HSP 2 Score: 57.3806 bits (137), Expect = 3.874e-35
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQ 505
            KY NM+++GI+DP KVTRSALQNAASV+   LTT+A V + P+ +
Sbjct:  482 KYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKE 526          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.874e-35
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372
            +E +AKL+  VAVI+VGAAT+T ++++KLRIEDA NAT AA+EEGIV GGG   +H+   +  + +K    D+R G  IV+KAL  P   I+ NAG+E  V+VE VK      G+ A+T++
Sbjct:  365 QERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALNATRAAVEEGIVAGGGTTYIHIIKALEEL-EKTATGDERTGIAIVRKALEEPLKQIAINAGLEGSVIVEKVKTLPVGHGFNALTEE 484          

HSP 2 Score: 64.3142 bits (155), Expect = 3.874e-35
Identity = 30/45 (66.67%), Postives = 40/45 (88.89%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQ 505
            +Y +M+ AGI+DPAKVTRSALQNAASVA M+LTT+A+V +KP+ +
Sbjct:  484 EYVDMIAAGIVDPAKVTRSALQNAASVAAMLLTTEALVAEKPEKE 528          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 3.874e-35
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372
            +E +AKL+  VAVI+VGAAT+T ++++KLRIEDA  AT AA+EEGIV GGG ALV++   V  + D +   D++ G  I+ +AL  P   I+ NAG+E  V+VE VK SE   G+ A  ++
Sbjct:  364 QERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALAATKAAVEEGIVAGGGTALVNVIPKVAKVLDTV-SGDEKTGVQIILRALEEPVRQIAENAGLEGSVIVEKVKASEPGIGFDAYNEK 483          

HSP 2 Score: 65.855 bits (159), Expect = 3.874e-35
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQNT 511
            KY NM++AGI+DPAKVTRSALQNAASVA MVLTT+++V   P+ + +
Sbjct:  483 KYVNMIEAGIVDPAKVTRSALQNAASVASMVLTTESVVADIPEKETS 529          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_STAES (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groL PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.874e-35
Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372
            +E +AKL+  VAVIKVGAA++T L++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  IK    + D   G +IV KAL AP   I+ NAG+E  ++VE +K +E   G+ A T++
Sbjct:  364 QERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNE 481          

HSP 2 Score: 58.9214 bits (141), Expect = 3.874e-35
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQN 508
            ++ NML+ GI+DP KVTRSALQ+AASVA M LTT+A+V   P+ +N
Sbjct:  481 EWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEPEN 526          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_STAEQ (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groL PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.874e-35
Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372
            +E +AKL+  VAVIKVGAA++T L++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  IK    + D   G +IV KAL AP   I+ NAG+E  ++VE +K +E   G+ A T++
Sbjct:  364 QERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNE 481          

HSP 2 Score: 58.9214 bits (141), Expect = 3.874e-35
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQN 508
            ++ NML+ GI+DP KVTRSALQ+AASVA M LTT+A+V   P+ +N
Sbjct:  481 EWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEPEN 526          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.874e-35
Identity = 57/121 (47.11%), Postives = 84/121 (69.42%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKAMTDQ 372
            +E +AKL+  VAVI+VGAAT+T L+++K R+EDA  AT AA+EEGIVPGGGA LVH    +PA++    + D+ +G  IV++AL  P   I+ NAG+E  V+VE V+  +   G+ A+ ++
Sbjct:  365 QERLAKLAGGVAVIRVGAATETELKEKKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEE 482          

HSP 2 Score: 63.5438 bits (153), Expect = 3.874e-35
Identity = 29/45 (64.44%), Postives = 40/45 (88.89%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQ 505
            +Y +M++AGI+DPAKVTRSALQNAAS+A M+LTT+AI+ + PK +
Sbjct:  482 EYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAIIAEIPKEE 526          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.046e-35
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKA 360
            +E +AKL+  VAVIKVGAAT+T L++ KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + D+  G +IV +AL  P   I++NAG E  V++E +K SE  TG+ A
Sbjct:  364 QERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNA 477          

HSP 2 Score: 58.5362 bits (140), Expect = 5.046e-35
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQ 505
            ++ +M+  GIIDP KVTRSALQNAASVA ++LTT+A+V  KP+ +
Sbjct:  481 EWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPE 525          
BLAST of EY684207 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.046e-35
Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 1
Query:   10 REEIAKLSLWVAVIKVGAATQTYLEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADDRLGADIVQKALVAPASLISHNAGVESEVVVENVKDSEWTTGYKA 360
            +E +AKL+  VAVIKVGAAT+T L++ KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + D+  G +IV +AL  P   I++NAG E  V++E +K SE  TG+ A
Sbjct:  364 QERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNA 477          

HSP 2 Score: 58.5362 bits (140), Expect = 5.046e-35
Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 2
Query:  371 KYENMLQAGIIDPAKVTRSALQNAASVARMVLTTQAIVPQKPKTQ 505
            ++ +M+  GIIDP KVTRSALQNAASVA ++LTT+A+V  KP+ +
Sbjct:  481 EWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPE 525          
The following BLAST results are available for this feature:
BLAST of EY684207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRGN2.974e-3550.4160 kDa chaperonin OS=Streptococcus gordonii GN=gro... [more]
CH60_CLOBB3.874e-3552.5460 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBA3.874e-3552.5460 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CARHZ3.874e-3547.9360 kDa chaperonin OS=Carboxydothermus hydrogenofor... [more]
CH60_CLOTH3.874e-3547.9360 kDa chaperonin OS=Clostridium thermocellum (str... [more]
CH60_STAES3.874e-3551.2460 kDa chaperonin OS=Staphylococcus epidermidis (s... [more]
CH60_STAEQ3.874e-3551.2460 kDa chaperonin OS=Staphylococcus epidermidis (s... [more]
CH601_MOOTA3.874e-3547.1160 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
CH60_STRA55.046e-3552.9960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA35.046e-3552.9960 kDa chaperonin OS=Streptococcus agalactiae sero... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-054-D01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684207 ID=EY684207; Name=EY684207; organism=Citrus sinensis; type=EST; length=927bp
CCCGCGTTCCGTGAGGAAATTGCTAAATTGTCCCTATGGGTTGCTGTTAT
TAAAGTTGGAGCTGCCACACAAACTTATCTTGAGGACCGTAAACTCCGTA
TTGAAGATGCCAAGAATGCAACTTTTGCTGCCATAGAGGAAGGTATTGTT
CCTGGTGGTGGTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTAT
CAAGGACAAGCTTGAAGATGCAGATGACCGATTAGGTGCTGACATTGTGC
AGAAGGCACTGGTAGCACCTGCATCACTGATATCTCACAATGCTGGAGTT
GAAAGTGAGGTTGTTGTGGAGAACGTGAAAGATAGTGAATGGACGACTGG
TTACAAAGCAATGACAGACCAAGTATGAGAACATGCTTCAGGCTGGAATT
ATTGATCCAGCAAAGGTAACAAGAAGTGCATTGCAAAATGCGGCTTCCGT
TGCACGAATGGTCTTGACCACTCAGGCTATTGTCCCGCAAAAACCAAAGA
CCCAAAATACCAGAAACCGCTCCGCCCCAAGGTCTTATGGAGGTAAATCT
TAAGAACTCTTCCGAATTTAATTAAGAGTTTTAAAAGAGAAAAAAGGGTT
TTTCTCGCGAAGAACTGAAAAAAAACAAGTTTGCCTAAATTGAAAAACAC
AACGCGACTTTTTCTGATTAGGATAGAAATTCGATCAAAGTTGCTGAGAT
CACTATGTAGAATAGTTAATGATCGAACTTCAAAATAGACGATGTATTAG
AACGAATGGTGGGACATCTTTTGAGAATTATCTTTATACCTAGGAGCGGA
GAGTATAACTTTTATAAAGTGATACCTAAAACTATGCCAGGAGCAGCTGA
ATAAACATTGTGAGATAAAGACCCGAAGATACCCAATTAACTCTAGAAAC
ACACCGCATGAAAAAGCGAACAAAAGT
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