EY684123
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 4.851e-78 Identity = 157/236 (66.53%), Postives = 179/236 (75.85%), Query Frame = 1 Query: 19 SSFVGKAVNLAPSGNELSNG------GRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE D + P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 9 SAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 7.781e-78 Identity = 144/185 (77.84%), Postives = 156/185 (84.32%), Query Frame = 1 Query: 19 SSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*P 558 S+F G+ + L P NEL NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMGAVEGYR+ GGPLGE D L P Sbjct: 9 SAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYP 189 HSP 2 Score: 23.0978 bits (48), Expect = 7.781e-78 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 579 LGLADDPEAF 608 LGLA+DPEAF Sbjct: 196 LGLAEDPEAF 205
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 4.107e-77 Identity = 156/236 (66.10%), Postives = 179/236 (75.85%), Query Frame = 1 Query: 16 SSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D + P + + P FA+L K + + RLAMF M GF +AIVTG G Sbjct: 9 TTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL-ADDPDTFAELKVK-ELKNGRLAMFSMFGF-FVQAIVTGKG 235
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 4.107e-77 Identity = 156/236 (66.10%), Postives = 179/236 (75.85%), Query Frame = 1 Query: 16 SSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D + P + + P FA+L K + + RLAMF M GF +AIVTG G Sbjct: 9 TTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL-ADDPDTFAELKVK-ELKNGRLAMFSMFGF-FVQAIVTGKG 235
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 7.005e-77 Identity = 154/236 (65.25%), Postives = 177/236 (75.00%), Query Frame = 1 Query: 19 SSFVGKAVNLAPSGNELS------NGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG +EGYR+ GGPLGE D + P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 9 SAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 7.005e-77 Identity = 157/236 (66.53%), Postives = 176/236 (74.58%), Query Frame = 1 Query: 16 SSSFVGKAVNLAPSGNEL-----SNGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 SSS G+ + L P NEL + RI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHAQSILAIWACQVVLMG +EGYR+ GG LGE DPL P + + P+ A+L K + + RLAMF M GF +AIVTG G Sbjct: 9 SSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGL-ADDPEACAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 238
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 5.930e-76 Identity = 147/211 (69.67%), Postives = 167/211 (79.15%), Query Frame = 1 Query: 76 GGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 GGR++MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D + P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 4 GGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 209
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.012e-75 Identity = 154/236 (65.25%), Postives = 175/236 (74.15%), Query Frame = 1 Query: 19 SSFVGKAVNLAPSGNELSN------GGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D + P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 9 SAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 237
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.321e-75 Identity = 149/210 (70.95%), Postives = 168/210 (80.00%), Query Frame = 1 Query: 79 GRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE DPL P + + P+ FA+L K + + RLAMF M GF +AIVTG G Sbjct: 32 GRFSMRRTV-KAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGL-ADDPEAFAELKVK-EIKNGRLAMFSMFGF-FVQAIVTGKG 236
BLAST of EY684123 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.461e-74 Identity = 156/236 (66.10%), Postives = 173/236 (73.31%), Query Frame = 1 Query: 19 SSFVGKAVNLAPSGNEL----SNGG--RISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPL*PRWQL*SIWVWLMTPKLFAKLTGKGKSRWERLAMFPMVGFSSFRAIVTGPG 708 S+F GK GNE N G R +MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE DPL P + + P FA+L K + + RLAMF M GF +AIVTG G Sbjct: 9 SAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRTVKSAPES--IWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGL-ADDPDSFAELKVK-ELKNGRLAMFSMFGF-FVQAIVTGKG 237 The following BLAST results are available for this feature:
BLAST of EY684123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY684123 ID=EY684123; Name=EY684123; organism=Citrus sinensis; type=EST; length=996bpback to top |