EY684083

Overview
NameEY684083
Unique NameEY684083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPP (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis (strain Pestoides F) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPE (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPB (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPA (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERP3 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.186e-20
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.466e-20
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 2
Query:  107 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            +D +L E+D + +   L + T+HLI +E+LA MK+ AIL+N  RGPV+DE AL+  LK   +   GLDVFE EP  +   L  ++N + +PHI SA+  TR GMA  A  N++  + G
Sbjct:  194 LDTLLAESDFLCISLPLTEQTHHLIGREQLAKMKRSAILINAGRGPVVDEQALIAALKDGTLHAAGLDVFEQEPLPVSSELLALRNVVALPHIGSATHETRYGMAKDAVDNLIAALNG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_SERP5 (Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans (strain 568) GN=ghrB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.139e-20
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R   +D +L E+D I +   L   T+H+I++++LA MKK  IL+N  RGPV+DE AL+E L+   +   GLDVFE EP  +   L  + N + +PHI SA+  TR GMA  A  N++  + G
Sbjct:  190 RRCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKKSGILINAGRGPVVDEAALIEALQNGTIHAAGLDVFEKEPLPVSSPLLTLPNVVALPHIGSATHETRYGMAECAVDNLIAALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPY (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.218e-19
Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA +K  AIL+N  RGPV+DE AL+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKIKSSAILINAGRGPVVDEQALIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
BLAST of EY684083 vs. ExPASy Swiss-Prot
Match: GHRB_YERPN (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ghrB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.218e-19
Identity = 51/122 (41.80%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   95 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKG 457
            R  S+D +L EAD + +   + + TYH+I +E+LA MK  AIL+N  RGPV+DE  L+  L+   +   GLDVFE EP  +   L  ++N + VPHI SA+  TR  MA  A  N++  + G
Sbjct:  190 RHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPVVDEQTLIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAACAVDNLINALTG 311          
The following BLAST results are available for this feature:
BLAST of EY684083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
GHRB_YERPP4.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPG4.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPE4.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPB4.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPA4.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERP34.186e-2042.62Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_ERWT95.466e-2043.22Glyoxylate/hydroxypyruvate reductase B OS=Erwinia ... [more]
GHRB_SERP57.139e-2041.80Glyoxylate/hydroxypyruvate reductase B OS=Serratia... [more]
GHRB_YERPY1.218e-1941.80Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]
GHRB_YERPN1.218e-1941.80Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-H06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684083 ID=EY684083; Name=EY684083; organism=Citrus sinensis; type=EST; length=939bp
CTATGATCTTTACCAAGCTACACGCTTGGAAAAGTTTGTCACAGCTTATG
GTCAGTTTCTAAAAGCCAATGGTGAACAACCTGTCACTTGGAAAAGAGCC
TCGTCCATGGATGAGGTGCTTCGAGAAGCAGATGTGATAAGTCTTCATCC
AGTCTTGGATAAAACCACTTACCATTTGATCAACAAAGAAAGGCTTGCAA
CGATGAAGAAGGAAGCGATTCTTGTCAACTGCAGTAGGGGTCCCGTGATT
GATGAAGTAGCTCTGGTGGAGCATTTGAAACAAAATCCAATGTTTCGTGT
CGGTCTTGATGTCTTTGAGGATGAGCCTTACATGAAGCCTGGACTCTCTG
AAATGAAGAACGCCATCGTGGTACCTCACATTGCTTCCGCGTCCAAGTGG
ACTCGTGAAGGAATGGCAACCCTTGCTGCTCTGAATGTCCTGGGAAAGAT
CAAAGGATACCCCATATGGGGTAACCCAAATCAAGTAGAACCATTCTTGA
ACGAGAATGCTCAGCCTCCTGCTGCAAGTCCAAGCATTGTGAACTCAAAG
GCATTGGGTTTGCCGGTTTCAAGGCTTTAGGCTCTCAGCAGCTTCACCAC
CTCGGGGGCCTAATGGTGTGCATTAAAAACACCCTTACTAAGTTTGAAAG
GTATTTTTGATGTGAGTGGTCAAAATTTTTCTTTATTGAGAAACTTTAAC
AACCCTGGTACCTACTGGCTTTCGCGCCTTTGTGGTGAATTGACTGGCTT
TATTATTTTTCCATTTTTTCGGTGCATCTTAAAAAAAAAAAAAAAAGGGG
GGCCCGCCTCAAAGGGGACCCAAACTTATCACAGCCCGGGCAGGCCAGGT
TCTAATCTTTTTATTAAATGGCCACCCTAAACATCTCTTTTTTTGGGCCC
TGACTTTTTTCTAAAATGCGGGCAAGGAGAAAAAAACAC
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