EY684011

Overview
NameEY684011
Unique NameEY684011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY684011 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.557e-17
Identity = 62/197 (31.47%), Postives = 87/197 (44.16%), Query Frame = 3
Query:   18 FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHG----GEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI--------------EL-------RPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRDYITGLRLYL 533
            F+   + +  I I   QE   LGT G +   RD+++      FF++N+DV SE+P  EM++FH+ HG    G          +   YG +V    T +V  FVEKP  FV + IN GIYL  P +   I              EL           +E+++F  +A + KLF      FW  I      I   RLYL
Sbjct:   68 FIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFPLLEMLQFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHETNEVLHFVEKPSTFVSDIINCGIYLFTPDIFAHIGKVFQRNQQEKIQEELTHGRQMPEVVRLEQDIFTALAGQKKLFVYKTQHFWSQIKSAGSAIYASRLYL 264          
BLAST of EY684011 vs. ExPASy Swiss-Prot
Match: RFBF_SALTI (Glucose-1-phosphate cytidylyltransferase OS=Salmonella typhi GN=rfbF PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.689e-14
Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 3
Query:   87 TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRD--YITGL 521
            T G L    + + DD  E F     D +++      I+FHKAHG +A++  T    P ++G +  +   G+V  F EKPK   G  IN G ++LNP+V+D I+   T+ E+E    +A +G+L A   PGFW  +   RD  Y+ GL
Sbjct:  106 TGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATF--PPGRFGAL--DIQAGQVRSFQEKPK-GDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGL 245          
BLAST of EY684011 vs. ExPASy Swiss-Prot
Match: RFBF_SALTY (Glucose-1-phosphate cytidylyltransferase OS=Salmonella typhimurium GN=rfbF PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.124e-14
Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 3
Query:   87 TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALEGKLFAMVLPGFWMDIGQPRD--YITGL 521
            T G L    + + DD  E F     D +++      I+FHKAHG +A++  T    P ++G +  +   G+V  F EKPK   G  IN G ++LNP+V+D I+   T+ E+E    +A +G+L A   PGFW  +   RD  Y+ GL
Sbjct:  106 TGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATF--PPGRFGAL--DIRAGQVRSFQEKPK-GDGAMINGGFFVLNPSVIDLIDNDATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGL 245          
BLAST of EY684011 vs. ExPASy Swiss-Prot
Match: YBB2_SCHPO (Probable mannose-1-phosphate guanyltransferase OS=Schizosaccharomyces pombe GN=SPBC13G1.02 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.155e-12
Identity = 41/126 (32.54%), Postives = 70/126 (55.56%), Query Frame = 3
Query:   66 QETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKV--DEPSKYGVVVTEESTGKVEKFVEKPKLFVGNKINAGIYLLNPAVLDRI----ELRPTSIEKEV 425
            +E   LGT G L   RD+++       FV+++DV   +P  E++  H       ++M TKV  ++ S +G +V E STG+V  +V+KP  ++ N I+ GIY+ + ++ D I    E R   +EK++
Sbjct:   86 REYNCLGTGGGLYHFRDQILKGHTSNVFVMHADVCCSFPLQELLNVHHEKKALVTLMATKVSKEDASNFGCLVEEPSTGRVLHYVDKPSSYLSNIISCGIYIFDASIFDEIKKAYERRLEEVEKQL 211          
BLAST of EY684011 vs. ExPASy Swiss-Prot
Match: GLMU_METM5 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0513 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.338e-11
Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 3
Query:   69 ETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKPKL--FVGNKINAGIYLLNPAVLDRIELRPTSIEKEVFPKIALE-----GKLFAMVLPGFWMDIGQPRDYITGLRLYLD 536
            + + LGT   +  A++ + DD    F VLN DVI E    E++++  A      + ++KVD P  +GV+       KV   +EKPK      N INAGIY L  +V   +E    S   E+    AL+     GKL  + L G+W DIG P D ++    +L+
Sbjct:   74 QEKQLGTGHAVLTAKNFIKDD----FLVLNGDVIFEDSIDEILDYENA------VALSKVDNPENFGVIELGYDN-KVINLLEKPKKEELTSNFINAGIYKLQNSVFGILENLVPSERGEIELTDALKKLIEIGKLHGVELNGYWNDIGHPWDVLSANSHFLN 225          
The following BLAST results are available for this feature:
BLAST of EY684011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
GMPAB_DANRE1.557e-1731.47Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]
RFBF_SALTI4.689e-1435.37Glucose-1-phosphate cytidylyltransferase OS=Salmon... [more]
RFBF_SALTY6.124e-1435.37Glucose-1-phosphate cytidylyltransferase OS=Salmon... [more]
YBB2_SCHPO1.155e-1232.54Probable mannose-1-phosphate guanyltransferase OS=... [more]
GLMU_METM56.338e-1133.13Bifunctional protein glmU OS=Methanococcus maripal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-001-B01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY684011 ID=EY684011; Name=EY684011; organism=Citrus sinensis; type=EST; length=967bp
CGTAGGTGATGTTGAACTTTTTGAAGGAATTTGAAGCAAAGCTTGGGATC
AAGATCATCTGCTCACAAGAGACTGAGCCACTGGGCACTGCTGGTCCTCT
GGCTCTGGCTAGAGACAAATTGATTGACGATACTGGTGAGCCATTTTTCG
TCCTTAACAGTGATGTTATTAGTGAGTACCCATTTGCAGAAATGATTGAA
TTCCACAAAGCACATGGAGGAGAGGCCTCCATCATGGTAACCAAGGTGGA
TGAGCCATCAAAATATGGTGTGGTGGTTACGGAAGAGTCTACTGGAAAAG
TTGAGAAATTCGTTGAGAAACCTAAATTATTTGTTGGTAACAAAATTAAT
GCTGGAATTTATCTTTTGAACCCTGCGGTTCTTGATCGCATTGAGCTGAG
GCCCACCTCCATTGAGAAAGAGGTCTTTCCAAAAATTGCTTTAGAAGGAA
AGCTCTTCGCGATGGTTCTTCCAGGTTTCTGGATGGACATTGGACAGCCG
AGGGATTACATTACAGGCTTGAGACTCTATCTGGACTCCCCTGAGGAAGA
AGCCCTCATTGAAGTTCGGCACTGGTGACTAAGTTGGAACCAATGTCTTG
GGGCTTGAAAGTGCTACCAGTGGGGAAGGATGGTTGAATCGGACCCCAGG
TGGCACCACGGACCAGCCAGCGGCAGCACCACCCAAGACCCCAAACCCAC
CCGCCGAAGGCCACACGCGCGCCCCCACGCCACCGCCGTCCCTGAGGACG
AACCCACGCACCCGAGGGCCAATCCGAAGAAGCCCGTCAGGCCATCCCCG
CCACTGTACACGCCAAGACACAGCGCTATCACACCGCCAAGCCCACCCAC
AGCGCACCCACTGTGTCCCCCACACGAACCTCTCCTCCGCCGCAGCCGCG
TCCGCTAGCCACGCCGGGGCCCCGTCGGCACTGCCGGAGAACCGCGCACG
CGCCTGGCCGCCGTGGG
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