EY683999

Overview
NameEY683999
Unique NameEY683999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length951
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 1.010e-61
Identity = 119/219 (54.34%), Postives = 160/219 (73.06%), Query Frame = 1
Query:   25 VFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSLDDEKAKEMPYIPSMGI 660
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WF+GTADAVR+++W+ E++    ++   L+L+GD LYRMDY   +Q H + +ADIT++  P+ E RA+ +GL+K D  GR+I+FSEKPKG+ L+AMKV+T+ L+   +   + PYI SMG+
Sbjct:   91 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKHKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVIQFSEKPKGDDLEAMKVDTSFLNFAIDDPAKYPYIASMGV 306          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 1.319e-61
Identity = 118/219 (53.88%), Postives = 160/219 (73.06%), Query Frame = 1
Query:   25 VFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSLDDEKAKEMPYIPSMGI 660
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WF+GTADAVR+++W+ E++    ++   L+L+GD LYRMDY   +Q H + +ADIT++  P+ E RA+ +GL+K D  GR+++FSEKPKG+ L+AMKV+T+ L+   +   + PYI SMG+
Sbjct:   90 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVVQFSEKPKGDDLEAMKVDTSFLNFAIDDPAKYPYIASMGV 305          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.550e-61
Identity = 123/247 (49.80%), Postives = 168/247 (68.02%), Query Frame = 1
Query:   25 VFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK-NEGFVEVLAAQQSPENP-NWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSLDDEKAKEMPYIPSMGILCLQQKSGG*FC*GKNFPGPKDFGIEIFP 747
            V  IILGGG G++L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V++QFNS SLNRH+ R Y    GG    +G V+VLAA Q PE P  WFQGTAD++R+++W+ E++    ++   ++L+GD LYRM+Y   +Q H E DADIT++  P+DE RA+  GL+KID  GR+++F EKPKG  L +M+VET  LS   + A++ PY+ SMGI   ++ +       K +    DFG EI P
Sbjct:   84 VSAIILGGGTGSQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMSQFNSTSLNRHIHRTYLE--GGINFADGSVQVLAATQMPEEPAGWFQGTADSIRKFIWVLEDYYSHKSIDNIVILSGDQLYRMNYMELVQKHVEDDADITISCAPVDESRASKNGLVKIDHTGRVLQFFEKPKGADLNSMRVETNFLSYAIDDAQKYPYLASMGIYVFKKDALLDLLKSK-YTQLHDFGSEILP 327          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 5.542e-60
Identity = 122/220 (55.45%), Postives = 157/220 (71.36%), Query Frame = 1
Query:   25 VFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADAVRQYLWLFEE---HNVLE-FLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSLDD-EKAKEMPYIPSMGI 660
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WFQGTADAVR+++W+ E+   H  +E  L+L+GD LYRMDY   +Q H + +ADIT++  P+ E RA+ +GL+K D  GR+I+FSEKPKG  L+ MKV+T+ L+        E PYI SMG+
Sbjct:   87 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGRVIQFSEKPKGAALEEMKVDTSFLNFATCTLPAEYPYIASMGV 303          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 7.238e-60
Identity = 116/219 (52.97%), Postives = 158/219 (72.15%), Query Frame = 1
Query:   25 VFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSLDDEKAKEMPYIPSMGI 660
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WF+GTADA R+ +W+ E++    ++   L+L+GD LYRMDY   +Q H + +ADIT++  P+ E RA+ +GL+K D  GR+++FSE+PKG+ L+AMKV+T+ L+   +   + PYI SMG+
Sbjct:   71 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAWRKIIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASEYGLVKFDSSGRVVQFSEQPKGDDLEAMKVDTSFLNFAIDDPAKYPYIASMGV 286          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGC_THIDA (Glucose-1-phosphate adenylyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgC PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.791e-42
Identity = 93/201 (46.27%), Postives = 126/201 (62.69%), Query Frame = 1
Query:   16 SRSVFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSL 612
            +R    ++L GG G+RL  LT  RAKPAVP+G  YR+ID P+SNC+NS I +I VLTQ+ S SL RHL RA+    G  + E   FVE+L AQQ      W+QGTADA+ Q L + + H+    LVL GDH+Y MDY + +  H +T AD+TV ++ +    A AFG+M +DE  RI EF+EKP+       K  T ++S+
Sbjct:   25 TRKTLALVLAGGEGSRLKDLTAWRAKPAVPIGGKYRIIDFPLSNCVNSGIRRIGVLTQYKSHSLIRHLQRAW----GLMRTEVGEFVEILPAQQRTHKKEWYQGTADALFQNLDIMQRHHPEYVLVLGGDHVYTMDYTQMLLYHVQTGADVTVGSVEVPVAEAAAFGVMSVDESLRITEFNEKPREPDSMPGKPGTALVSM 221          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGC_NITOC (Glucose-1-phosphate adenylyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgC PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.161e-41
Identity = 91/201 (45.27%), Postives = 129/201 (64.18%), Query Frame = 1
Query:   10 RASRSVFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSL 612
            R +R    +IL GG G+RL  LT  RAKPAVP+G  +R+ID P+SNC+NS + +I VLTQ+ + SL RH+ + +   M GY  E FVE++ A Q  E+ +W+ GTADAV Q L +   HN    L+LAGDH+Y+MDY   +  H E +AD+TV  + +  K A AFG+M +DE  R+ EF+EKP+  Q    + + T+ S+
Sbjct:   12 RLTRDTLALILAGGRGSRLKNLTAWRAKPAVPIGGKFRIIDFPLSNCVNSGVRRICVLTQYKAHSLVRHIQQGWGF-MRGYLGE-FVELMPASQRIED-SWYAGTADAVYQNLDIVRSHNPEYVLILAGDHVYKMDYGDMLAYHVEREADMTVGCIHVPLKEAKAFGVMSVDENFRVTEFTEKPEHPQPSPGRSDETLASM 209          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGC1_ALHEH (Glucose-1-phosphate adenylyltransferase 1 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.516e-41
Identity = 86/185 (46.49%), Postives = 120/185 (64.86%), Query Frame = 1
Query:   10 RASRSVFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPK 564
            R +R    +I+ GG G RL  LT  R KPAVP G  +RLID P+SNC+NS I +I VLTQ+ + SL +H+ R +    G +    FVE++ AQQ  + P W+ GTADAV Q + + + HN    LVLAGDH+Y+MDY   I  H E+ A +TV  + +  KRA+AFG+M ++EE +++ F+EKPK
Sbjct:   12 RLTRDTLALIMAGGRGGRLSNLTDWRTKPAVPFGGKFRLIDFPLSNCINSGIRRIEVLTQYKAHSLIQHIQRGWGFLRGEFGE--FVELVPAQQRMDKPLWYAGTADAVYQNIDIIKAHNPSYVLVLAGDHVYKMDYGGMIARHAESGAAMTVGCVEVPRKRASAFGVMSVNEERQVLAFNEKPK 194          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGC_NITEU (Glucose-1-phosphate adenylyltransferase OS=Nitrosomonas europaea GN=glgC PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.762e-41
Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = 1
Query:   16 SRSVFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPK 564
            +R+   +IL GG GTRL  LT  RAKPAVP G  +R+ID  +SNC+NS + +I V+TQ+ + SL RH+ R ++   G ++   F+E+L AQQ  E   W+QGTADAV Q L +   HN    L+L GDH+Y+MDY R +  H E  AD+T+A L +  + A+AFG+M +D+  R   F+EKP+
Sbjct:   20 TRNTLALILAGGRGTRLKNLTDWRAKPAVPFGGKFRIIDFTLSNCVNSGVRRIGVVTQYKAQSLIRHIQRGWSFLDGRFQE--FIELLPAQQRTEEGTWYQGTADAVFQNLDILRTHNPGYVLILGGDHIYKMDYGRILAEHVERQADLTIACLEVPVEDASAFGVMAVDDSWRTTSFAEKPE 200          
BLAST of EY683999 vs. ExPASy Swiss-Prot
Match: GLGC_THET2 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgC PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.676e-40
Identity = 86/199 (43.22%), Postives = 123/199 (61.81%), Query Frame = 1
Query:   25 VFGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVETTILSL 612
            V G+IL GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ        P W++GTADA+ Q L L   H      V  GDH+++M+    ++ H +T ADIT+AA P+    AT FG++++DEE RI EF EKP+  +    + +T + S+
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPVPVAEATRFGVLQVDEEWRITEFQEKPEEPKPIPGRPDTALASM 202          
The following BLAST results are available for this feature:
BLAST of EY683999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
GLGL1_HORVU1.010e-6154.34Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_WHEAT1.319e-6153.88Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_MAIZE8.550e-6149.80Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE5.542e-6055.45Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_WHEAT7.238e-6052.97Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_THIDA1.791e-4246.27Glucose-1-phosphate adenylyltransferase OS=Thiobac... [more]
GLGC_NITOC1.161e-4145.27Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC1_ALHEH1.516e-4146.49Glucose-1-phosphate adenylyltransferase 1 OS=Alkal... [more]
GLGC_NITEU5.762e-4145.90Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_THET21.676e-4043.22Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-H12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683999 ID=EY683999; Name=EY683999; organism=Citrus sinensis; type=EST; length=951bp
CCACGCGTCCGAGCCAGTCGAAGTGTTTTCGGGATTATACTTGGAGGTGG
AGCAGGGACTCGCTTGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTG
TTCCATTGGGAGCTAATTACAGGCTGATTGATATTCCTGTGAGCAATTGT
TTGAATAGTAACATTTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGC
GTCCCTGAATCGTCACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTT
ACAAGAACGAAGGATTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAG
AATCCCAATTGGTTTCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTG
GCTGTTTGAGGAGCACAATGTTCTGGAATTTCTCGTTCTTGCTGGTGATC
ATTTGTACCGAATGGACTATGAGAGATTTATTCAGGCACACAGAGAAACT
GATGCGGATATCACAGTAGCTGCGCTGCCAATGGATGAAAAACGGGCTAC
TGCTTTTGGTCTGATGAAGATCGATGAAGAGGGACGCATAATTGAATTTT
CTGAGAAACCAAAAGGAGAGCAACTTAAAGCTATGAAGGTTGAAACCACC
ATATTAAGTCTTGATGATGAGAAAGCTAAAGAGATGCCTTACATACCAAG
TATGGGTATTTTATGTCTCCAGCAAAAAAGTGGAGGTTAATTCTGCTAAG
GGAAAAATTTTCCTGGACCTAAGGATTTTGGAATTGAAATTTTTCCCTGG
GGACACTTTCCTTTGGGAATGAGATGGCCAAACTTTTTTTAATAAAAGGC
TACTGGGGAAAAAACTTGGAAACATTTGGGGGTTTTTACCATGGCAAAAC
CGGGGGGATCACCAAAAAAACCAATTTCCGGAAATTCCTCTTCATGAAAC
CGTATTTGGCTCCCAATTAAAGCACCGGGCCAAAAATAATCTCCCCCCCC
C
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