EY683997

Overview
NameEY683997
Unique NameEY683997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11
Identity = 39/125 (31.20%), Postives = 63/125 (50.40%), Query Frame = 3
Query:  294 DEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE 668
            D + +  L+H L +  +   AL  +  MK+ GI P+V  YT+ +    R   +       + M + GC P VV YT +I G+   G++ +A ++F  M +KG  P+  TY+  I  LC  G+  E
Sbjct:  288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFRE 412          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.553e-11
Identity = 52/227 (22.91%), Postives = 99/227 (43.61%), Query Frame = 3
Query:   33 VDHAIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVG-FTVPLSYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE---TFEAPI*NGLK 701
            +DHA+  F  M++ G  PD+    T +DC C+ G   +A+   + + + G      +Y++ I                          +     +L+    + G+  +A+  +E MK  G+ P+  +Y + +  + +     +A+  F  M  +G +P+++   +LI  F    + AEA+ V   MK  G  PD  TY+  +  L +V K ++    +E  I +G K
Sbjct:  460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP161_ARATH (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11
Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 3
Query:  294 DEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEETFE 677
            D+  + +LI GL + G++EEA   ++TM  AG  P    YTS +    R+ +   AL + E M   GC P   TY  L+ G      + +  +++  MK  G   +   Y+  +  L K GK  E +E
Sbjct:  299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP421_ARATH (Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 37/129 (28.68%), Postives = 64/129 (49.61%), Query Frame = 3
Query:  294 DEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYR-MKIKGPFPDFRTYSMFIGCLCKVGKSEETFE 677
            D   + +LI G  +   I+EA A    M++AGI P V  Y S +    +   + R L++F+ M   G  P + +Y  L+  +  LG+  EA+ + +  + + G  P   TY++ +  LCK G ++   E
Sbjct:   47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE 175          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11
Identity = 51/207 (24.64%), Postives = 89/207 (43.00%), Query Frame = 3
Query:   42 AIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTV----PLSYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCK 650
            A ++F+EM++AG  PD       +D LC+ G +  A   + ++R +  ++       YS+ +                        K D  VF SLI    +  +++     ++ MK  G+ P        + H     +   A ++F +M +  CEP   TYT +I+ F    ++  A  V+  M+ KG FP   T+S+ I  LC+
Sbjct:  256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA---LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 458          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP426_ARATH (Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11
Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 3
Query:  306 FGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGK 659
            + +LIH     G  E+A A  E M + GI P+V  YTS +  F R    G+ +EI++ M +E  + T +TY  L+ GFA  G   EA DV       G  P   TY+M +    + G+
Sbjct:  488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11
Identity = 37/129 (28.68%), Postives = 67/129 (51.94%), Query Frame = 3
Query:  285 SKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEG---CEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKS 662
            +KLD   F ++I+   + G +E+A+  +  MK+ G+ PT   Y + +  +    +  R+ E+ + M +EG     P + T+  L+Q +    KV EAW+V  +M+  G  PD  TY+    C  + G++
Sbjct:  111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 50/210 (23.81%), Postives = 89/210 (42.38%), Query Frame = 3
Query:   51 IFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVPL-SYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEETFE 677
            ++++M+  G  PD       +     +G        +D + K GF+  L +Y++ +                        +     F +LI GL + G++E     ++   + G  P V  YT  +  +    ++ +A E+F+ M ++G  P V TY ++I+GF   GK  EA  +   M+ +G  P+F  YS  +  L   GK  E  E
Sbjct:  244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 52/218 (23.85%), Postives = 97/218 (44.50%), Query Frame = 3
Query:   30 KVDHAIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVP-LSYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQI----EEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE 668
            K+D A+ + ++M+ +G IP        L+ LC+ G ++ A   +  +R++G +   +SY+  I+                       + +      ++H L Q+G I    ++ L ++    QA     + + T  +   F+   V +ALE+++ M Q+      V Y  +I+G  + G +  A+     M  +G  PD  TY+  I  LCK GK +E
Sbjct:  136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353          
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11
Identity = 53/210 (25.24%), Postives = 84/210 (40.00%), Query Frame = 3
Query:   42 AIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVPLSYS-LYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE 668
            A  IFQE+   G +PD     T +D  C +G    A      L K G    L+ S + I                        KLD   + +L+HG  +  Q+ +    ++ M+ AGI P V  Y   +        +  A EI   + + G  P+ + +T +I GF+  G   EA+ +++ M      PD  T S  +   CK  + E+
Sbjct:  392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601          
The following BLAST results are available for this feature:
BLAST of EY683997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
PP288_ARATH1.189e-1131.20Pentatricopeptide repeat-containing protein At3g60... [more]
PP413_ARATH1.553e-1122.91Pentatricopeptide repeat-containing protein At5g42... [more]
PP161_ARATH2.029e-1130.47Pentatricopeptide repeat-containing protein At2g17... [more]
PP421_ARATH2.650e-1128.68Pentatricopeptide repeat-containing protein At5g46... [more]
PP129_ARATH2.650e-1124.64Pentatricopeptide repeat-containing protein At1g77... [more]
PP426_ARATH3.460e-1134.75Pentatricopeptide repeat-containing protein At5g50... [more]
PP397_ARATH5.903e-1128.68Pentatricopeptide repeat-containing protein At5g25... [more]
PPR81_ARATH7.709e-1123.81Pentatricopeptide repeat-containing protein At1g55... [more]
PP396_ARATH7.709e-1123.85Pentatricopeptide repeat-containing protein At5g24... [more]
PP164_ARATH7.709e-1125.24Pentatricopeptide repeat-containing protein At2g19... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-H10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683997 ID=EY683997; Name=EY683997; organism=Citrus sinensis; type=EST; length=925bp
CCCACGCGTCCGCTGGGAGAAAAGGCAGGAAGGTAGATCATGCCATAAAA
ATATTCCAGGAAATGGTAAATGCAGGGCATATCCCTGATAAGGAGCTGGT
TGAAACTTATCTTGATTGTTTATGTGAAGTTGGTATGCTGCAACTAGCTA
AAAGCTGTATGGATGTATTACGGAAAGTTGGTTTCACAGTTCCACTAAGT
TACTCCTTGTACATTAGAGCTCTTTGTCGAGCAGGGGAGTTGGAAGAAGC
TTTAGCCTTGCTTGATGAAGTTAAAGAAGAGCGATCTAAGCTGGATGAGT
TTGTTTTTGGAAGCCTTATTCATGGATTGGTGCAAAGAGGACAAATAGAA
GAGGCATTGGCTAAGGTGGAAACAATGAAGCAGGCTGGAATTTATCCTAC
TGTCCATGTTTATACATCCTTTGTAGTACATTTCTTTAGAGAGAAGCAAG
TAGGAAGAGCTTTAGAAATTTTTGAAAGAATGCGACAGGAGGGTTGTGAG
CCGACTGTCGTTACTTACACTGCCTTGATTCAAGGTTTTGCGAACTTAGG
CAAGGTTGCTGAAGCTTGGGATGTCTTTTACCGGATGAAAATTAAAGGAC
CTTTTCCAGATTTTAGGACTTATTCAATGTTCATTGGTTGTCTTTGTAAG
GTAGGTAAATCTGAAGAAACTTTTGAAGCTCCTATCTGAAATGGACTGAA
AGTGGGGAATTGTTCCCAGTAATAATTAATTTTCCAAAAAATCTTTTTTT
GGGCTTAAATAAAAAAGGGTAACCCAAATATTAACCTTGTTCTTGTAATA
AACAAAAAAAGGGTATCTCTAAAAATAATCCCCCAATGTTCTTTTAAAGT
GGAGCTCTTTAATTTTTTTTTGAATAAAAAAAAAAAAAAAAAAAAGGGGG
GGGCCCCCCCCCAAAGAGATACCCA
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