EY683997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.189e-11 Identity = 39/125 (31.20%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 294 DEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE 668 D + + L+H L + + AL + MK+ GI P+V YT+ + R + + M + GC P VV YT +I G+ G++ +A ++F M +KG P+ TY+ I LC G+ E Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFRE 412
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.553e-11 Identity = 52/227 (22.91%), Postives = 99/227 (43.61%), Query Frame = 3 Query: 33 VDHAIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVG-FTVPLSYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE---TFEAPI*NGLK 701 +DHA+ F M++ G PD+ T +DC C+ G +A+ + + + G +Y++ I + +L+ + G+ +A+ +E MK G+ P+ +Y + + + + +A+ F M +G +P+++ +LI F + AEA+ V MK G PD TY+ + L +V K ++ +E I +G K Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP161_ARATH (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.029e-11 Identity = 39/128 (30.47%), Postives = 61/128 (47.66%), Query Frame = 3 Query: 294 DEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEETFE 677 D+ + +LI GL + G++EEA ++TM AG P YTS + R+ + AL + E M GC P TY L+ G + + +++ MK G + Y+ + L K GK E +E Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP421_ARATH (Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11 Identity = 37/129 (28.68%), Postives = 64/129 (49.61%), Query Frame = 3 Query: 294 DEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYR-MKIKGPFPDFRTYSMFIGCLCKVGKSEETFE 677 D + +LI G + I+EA A M++AGI P V Y S + + + R L++F+ M G P + +Y L+ + LG+ EA+ + + + + G P TY++ + LCK G ++ E Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE 175
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.650e-11 Identity = 51/207 (24.64%), Postives = 89/207 (43.00%), Query Frame = 3 Query: 42 AIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTV----PLSYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCK 650 A ++F+EM++AG PD +D LC+ G + A + ++R + ++ YS+ + K D VF SLI + +++ ++ MK G+ P + H + A ++F +M + CEP TYT +I+ F ++ A V+ M+ KG FP T+S+ I LC+ Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA---LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 458
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP426_ARATH (Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.460e-11 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 3 Query: 306 FGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGK 659 + +LIH G E+A A E M + GI P+V YTS + F R G+ +EI++ M +E + T +TY L+ GFA G EA DV G P TY+M + + G+ Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP397_ARATH (Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.903e-11 Identity = 37/129 (28.68%), Postives = 67/129 (51.94%), Query Frame = 3 Query: 285 SKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEG---CEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKS 662 +KLD F ++I+ + G +E+A+ + MK+ G+ PT Y + + + + R+ E+ + M +EG P + T+ L+Q + KV EAW+V +M+ G PD TY+ C + G++ Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET 239
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 50/210 (23.81%), Postives = 89/210 (42.38%), Query Frame = 3 Query: 51 IFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVPL-SYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEETFE 677 ++++M+ G PD + +G +D + K GF+ L +Y++ + + F +LI GL + G++E ++ + G P V YT + + ++ +A E+F+ M ++G P V TY ++I+GF GK EA + M+ +G P+F YS + L GK E E Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 52/218 (23.85%), Postives = 97/218 (44.50%), Query Frame = 3 Query: 30 KVDHAIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVP-LSYSLYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQI----EEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE 668 K+D A+ + ++M+ +G IP L+ LC+ G ++ A + +R++G + +SY+ I+ + + ++H L Q+G I ++ L ++ QA + + T + F+ V +ALE+++ M Q+ V Y +I+G + G + A+ M +G PD TY+ I LCK GK +E Sbjct: 136 KLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
BLAST of EY683997 vs. ExPASy Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.709e-11 Identity = 53/210 (25.24%), Postives = 84/210 (40.00%), Query Frame = 3 Query: 42 AIKIFQEMVNAGHIPDKELVETYLDCLCEVGMLQLAKSCMDVLRKVGFTVPLSYS-LYIRXXXXXXXXXXXXXXXXXXXXXRSKLDEFVFGSLIHGLVQRGQIEEALAKVETMKQAGIYPTVHVYTSFVVHFFREKQVGRALEIFERMRQEGCEPTVVTYTALIQGFANLGKVAEAWDVFYRMKIKGPFPDFRTYSMFIGCLCKVGKSEE 668 A IFQE+ G +PD T +D C +G A L K G L+ S + I KLD + +L+HG + Q+ + ++ M+ AGI P V Y + + A EI + + G P+ + +T +I GF+ G EA+ +++ M PD T S + CK + E+ Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601 The following BLAST results are available for this feature:
BLAST of EY683997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >EY683997 ID=EY683997; Name=EY683997; organism=Citrus sinensis; type=EST; length=925bpback to top |