EY683996

Overview
NameEY683996
Unique NameEY683996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.335e-56
Identity = 118/231 (51.08%), Postives = 151/231 (65.37%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE 692
            GF GN+G+IV+AATNR D+LDSALLRPGRFDRQVTVD PD+ GR +IL+VH   K    DV  D IA RTPGF+G               RR    IS  EI D+++RI+AG E    +   + K LVAYHE GHA+ G L P +DPV K++++PRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEEV FG+  VTTGA+ D  Q++ +A+QMV  FG S+
Sbjct:  385 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV-FGQDNVTTGASNDFMQVSRVARQMVERFGFSK 614          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.335e-56
Identity = 123/253 (48.62%), Postives = 159/253 (62.85%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAG-MEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLLEMMGRDL 764
            GF  N GII+IAATNRADILD ALLRPGRFDRQ+ V+ PD+ GR E+LKVH  NK  + DV+L  IA RTPGFSG               R     IS   I+++IDR++AG  + + +   K K +VA+HE GH + G      D V KVT+VPRG A G    +P +D   +++ +L  +I+G LGGR AEEV FG  EV+TGA  D Q+ TG+A++MVT +GMSE +GP   + GS  G V L   GRD+
Sbjct:  298 GFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAGGYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFG--EVSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGS-GGQVFL---GRDI 544          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_SHIFL (Cell division protease ftsH OS=Shigella flexneri GN=ftsH PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.277e-56
Identity = 121/247 (48.99%), Postives = 157/247 (63.56%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GFEGN GIIVIAATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH        D+   +IA  TPGFSG               R  K  +S  E + + D+I+ G E    VMT+ + +S  AYHE GHAI G L P HDPV KVT++PRG+A G+T+F+P  D    S+Q+L ++I    GGR AEE+I+G   V+TGA+ D++  T LA+ MVT +G SE +GP  L+   + G+V L
Sbjct:  284 GFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGP--LLYAEEEGEVFL 527          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_SALTY (Cell division protease ftsH OS=Salmonella typhimurium GN=ftsH PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.277e-56
Identity = 121/247 (48.99%), Postives = 157/247 (63.56%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GFEGN GIIVIAATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH        D+   +IA  TPGFSG               R  K  +S  E + + D+I+ G E    VMT+ + +S  AYHE GHAI G L P HDPV KVT++PRG+A G+T+F+P  D    S+Q+L ++I    GGR AEE+I+G   V+TGA+ D++  T LA+ MVT +G SE +GP  L+   + G+V L
Sbjct:  284 GFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGP--LLYAEEEGEVFL 527          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_SALTI (Cell division protease ftsH OS=Salmonella typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.277e-56
Identity = 121/247 (48.99%), Postives = 157/247 (63.56%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GFEGN GIIVIAATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH        D+   +IA  TPGFSG               R  K  +S  E + + D+I+ G E    VMT+ + +S  AYHE GHAI G L P HDPV KVT++PRG+A G+T+F+P  D    S+Q+L ++I    GGR AEE+I+G   V+TGA+ D++  T LA+ MVT +G SE +GP  L+   + G+V L
Sbjct:  284 GFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGP--LLYAEEEGEVFL 527          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_ECOLI (Cell division protease ftsH OS=Escherichia coli (strain K12) GN=ftsH PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.277e-56
Identity = 121/247 (48.99%), Postives = 157/247 (63.56%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GFEGN GIIVIAATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH        D+   +IA  TPGFSG               R  K  +S  E + + D+I+ G E    VMT+ + +S  AYHE GHAI G L P HDPV KVT++PRG+A G+T+F+P  D    S+Q+L ++I    GGR AEE+I+G   V+TGA+ D++  T LA+ MVT +G SE +GP  L+   + G+V L
Sbjct:  284 GFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGP--LLYAEEEGEVFL 527          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_ECO57 (Cell division protease ftsH OS=Escherichia coli O157:H7 GN=ftsH PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.277e-56
Identity = 121/247 (48.99%), Postives = 157/247 (63.56%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GFEGN GIIVIAATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH        D+   +IA  TPGFSG               R  K  +S  E + + D+I+ G E    VMT+ + +S  AYHE GHAI G L P HDPV KVT++PRG+A G+T+F+P  D    S+Q+L ++I    GGR AEE+I+G   V+TGA+ D++  T LA+ MVT +G SE +GP  L+   + G+V L
Sbjct:  284 GFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGP--LLYAEEEGEVFL 527          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.626e-56
Identity = 114/232 (49.14%), Postives = 154/232 (66.38%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMT-DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGP 701
            GF+ + GIIVIAATNR DILD ALLRPGRFDRQ+ +  PD+RGR EILKVH  NKK   DV L+ +A  TPGF+G               R+GK  I+ +EI++++DRI  G+E   MT   K K  +A HE GHA+ G ++   D V K++++PRG A G+T  +P +D  +  K+ L+ +I+  LGGRAAEEV FG+  +TTGA  DLQ+ T LA +MV+ +GMS+ +GP
Sbjct:  288 GFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGP 519          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 6.202e-54
Identity = 118/247 (47.77%), Postives = 155/247 (62.75%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GF+GN GII+IAATNR D+LD ALLRPGRFDRQV V +PDIRGR +ILKVH        DV   +IA  TPGFSG               R  K  +S  E + + D+++ G E    VM+D + +S  AYHE GH I G L P HDP  KVT++PRG+A G+T+F+P  D   IS+Q+L ++I    GGR AEE+I+G   V+TGA  D++  T LA+ MVT +G SE +GP  L+   + G++ L
Sbjct:  284 GFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQKES-TAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGP--LLYAEEEGEIFL 527          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 3.078e-53
Identity = 116/247 (46.96%), Postives = 153/247 (61.94%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAQQMVTTFGMSE-IGPWSLMDGSQSGDVLL 743
            GF+GN G+I+IAATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH        DV   +IA  TPGFSG               R     +S    + + D+I+ G E    VM+D + +S  AYHE GH I G L P HDP  KVT++PRGQA G+T+F+P  D   IS+Q+L ++I    GGR AEE+I+G   V+TGA  D++  T LA+ MVT +G S+ +GP  L+   + G+V L
Sbjct:  284 GFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKES-TAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGP--LLYAEEEGEVFL 527          
The following BLAST results are available for this feature:
BLAST of EY683996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
FTSH_MEDSA1.335e-5651.08Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_BACPF1.335e-5648.62Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_SHIFL2.277e-5648.99Cell division protease ftsH OS=Shigella flexneri G... [more]
FTSH_SALTY2.277e-5648.99Cell division protease ftsH OS=Salmonella typhimur... [more]
FTSH_SALTI2.277e-5648.99Cell division protease ftsH OS=Salmonella typhi GN... [more]
FTSH_ECOLI2.277e-5648.99Cell division protease ftsH OS=Escherichia coli (s... [more]
FTSH_ECO572.277e-5648.99Cell division protease ftsH OS=Escherichia coli O1... [more]
FTSH_AQUAE6.626e-5649.14Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_BUCAI6.202e-5447.77Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_BUCAP3.078e-5346.96Cell division protease ftsH OS=Buchnera aphidicola... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683996 ID=EY683996; Name=EY683996; organism=Citrus sinensis; type=EST; length=980bp
CCACGCGTCCGGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCA
ACTAACAGGGCGGACATTCTTGATTCTGCCTTATTGAGGCCTGGACGTTT
TGATAGACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAGAACAGAGA
TATTAAAGGTTCACGGTAGCAACAAGAAGTTTGATGCAGATGTGTCTCTT
GATGTGATAGCCATGAGAACACCTGGGTTCAGTGGTGCTGACCTTGCAAA
CCTCTTAAATGAGGCTGCTATATTGGCTGGACGACGTGGGAAAGCTGCTA
TTTCATCTAAAGAGATTGATGATTCGATTGATAGGATTGTGGCTGGAATG
GAAGGAACTGTCATGACAGATGGGAAGAGTAAAAGTCTTGTTGCATACCA
TGAAGTTGGCCACGCAATATGCGGAACTTTGACTCCAGGACACGATCCCG
TTCAAAAAGTCACCCTTGTTCCACGTGGTCAGGCAAGAGGTCTTACCTGG
TTCATCCCTTCAGATGACCCCACCTTGATATCGAAGCAGCAGCTCTTTGC
AAGAATTGTTGGTGGACTCGGTGGTAGAGCTGCTGAGGAAGTGATTTTTG
GAGAGCCTGAAGTGACAACAGGAGCAGCTGGTGATTTGCAACAGATCACT
GGTTTGGCCCAACAGATGGTAACCACATTTGGAATGTCTGAAATTGGCCC
ATGGTCGCTCATGGACGGATCACAAAGTGGTGATGTCCTCTTGGAAATGA
TGGGCAGGGACCTCATGTTCTAAAAACCTTGCTAAAAAATTTGATGCCGC
GCGTCAAAAAAACAACCAAAACCGTGGCCCTATAAAAATTGCTTTAAACC
CAAAAAAGGGAAAACCCGGGAACCCCTTTAAAAAAAATGGGGAAATTTTC
TTCCTGGGAAAAGAAAACATGGTTCAGGGGGGAAAAAAATTTCCGGGGGA
TATCCCCCCCTAAAAATTTTGTGCAAAAAA
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