EY683996

Overview
NameEY683996
Unique NameEY683996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 3.327e-15
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSK 383
            GF+    + +IAATNR DILD ALLRPGRFDR + V +P+  GR EI +++    K D ++  D++A  T GFSG               R G+  ++  ++  +I++I A       TD   K
Sbjct:  267 GFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKNTDRTEK 390          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.345e-15
Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 338
            GF     + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI  ++    K + +++L++++  + GFSG               R G+  ++ K++ ++I +I
Sbjct:  267 GFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKI 375          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.816e-14
Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV 407
            GF+    + VIAATNR DILD ALLRPGRFDR + V +PD RGR EILKVH + K    +V L +IA  T G SG               R  +  ++ ++   ++D+++         + +    +A HEV
Sbjct:  271 GFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVH-TRKMNLRNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLG-------AEKRLAQAIAMHEV 394          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.804e-14
Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 341
            GFE    + ++AATNR DILD ALLRPGRFDR + V +P+  GR EILK+H S      +V ++++A  T G SG               R  +  ++  +  D++D+I+
Sbjct:  284 GFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM 393          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.804e-14
Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 236
            G EG   +IVIAATNR D +D AL RPGRFDR++ + VPD  GR EILK+H        DV+L  +A  T GF G
Sbjct:  319 GLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVG 393          

HSP 2 Score: 73.9442 bits (180), Expect = 1.545e-12
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 236
            G E    ++VIAATNR DI+D AL+R GRFDR V V  P I GR +ILK+H  +    ADVSL  +A R  G+ G
Sbjct:  593 GLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVG 667          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.274e-14
Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 341
            GF+    + VIAATNR DILD ALLRPGRFDR + V +PD  GR EILKVH    K   +V L VIA  T G SG               R  +  ++ ++   ++D+++
Sbjct:  273 GFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVL 381          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.194e-14
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 338
            GF+    + ++AATNR DILD ALLRPGRFDR + + +PD +GR  ILK+H        DV+L  ++  T G +G               R  + A++S++   +ID++
Sbjct:  286 GFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKL 394          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.070e-13
Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 353
            GF+    I VIAATNR DILD ALLRPGRFDR + + +PD  GR EI K+H  +     DV L  +A  T G SG               R  +  ++  +   ++DR++   E
Sbjct:  312 GFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKE 425          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.070e-13
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 353
            GF+    I V+ ATNR D LD ALLRPGR DR+V   +PD+ GRT+I K+H      + D+  +++A   P  +G               R  +  ++ K+  D++++++ G +
Sbjct:  301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414          
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.070e-13
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 3
Query:   12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 353
            GF+    I V+ ATNR D LD ALLRPGR DR+V   +PD+ GRT+I K+H      + D+  +++A   P  +G               R  +  ++ K+  D++++++ G +
Sbjct:  301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414          
The following BLAST results are available for this feature:
BLAST of EY683996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
PSMR_SULTO3.327e-1536.29Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_SULIN4.345e-1538.53Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_THEGJ2.816e-1437.88Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_METTH4.804e-1438.18Proteasome-activating nucleotidase OS=Methanobacte... [more]
CDCH_HALSA4.804e-1453.33Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
PSMR_PYRAB6.274e-1441.82Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR_METMJ8.194e-1436.70Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_METKA1.070e-1338.60Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PRS7_SPIOL1.070e-1332.4626S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ1.070e-1332.4626S protease regulatory subunit 7 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-048-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY683996 ID=EY683996; Name=EY683996; organism=Citrus sinensis; type=EST; length=980bp
CCACGCGTCCGGGTTTTGAGGGTAATACTGGTATCATTGTGATTGCTGCA
ACTAACAGGGCGGACATTCTTGATTCTGCCTTATTGAGGCCTGGACGTTT
TGATAGACAGGTTACTGTTGATGTTCCTGACATTCGAGGAAGAACAGAGA
TATTAAAGGTTCACGGTAGCAACAAGAAGTTTGATGCAGATGTGTCTCTT
GATGTGATAGCCATGAGAACACCTGGGTTCAGTGGTGCTGACCTTGCAAA
CCTCTTAAATGAGGCTGCTATATTGGCTGGACGACGTGGGAAAGCTGCTA
TTTCATCTAAAGAGATTGATGATTCGATTGATAGGATTGTGGCTGGAATG
GAAGGAACTGTCATGACAGATGGGAAGAGTAAAAGTCTTGTTGCATACCA
TGAAGTTGGCCACGCAATATGCGGAACTTTGACTCCAGGACACGATCCCG
TTCAAAAAGTCACCCTTGTTCCACGTGGTCAGGCAAGAGGTCTTACCTGG
TTCATCCCTTCAGATGACCCCACCTTGATATCGAAGCAGCAGCTCTTTGC
AAGAATTGTTGGTGGACTCGGTGGTAGAGCTGCTGAGGAAGTGATTTTTG
GAGAGCCTGAAGTGACAACAGGAGCAGCTGGTGATTTGCAACAGATCACT
GGTTTGGCCCAACAGATGGTAACCACATTTGGAATGTCTGAAATTGGCCC
ATGGTCGCTCATGGACGGATCACAAAGTGGTGATGTCCTCTTGGAAATGA
TGGGCAGGGACCTCATGTTCTAAAAACCTTGCTAAAAAATTTGATGCCGC
GCGTCAAAAAAACAACCAAAACCGTGGCCCTATAAAAATTGCTTTAAACC
CAAAAAAGGGAAAACCCGGGAACCCCTTTAAAAAAAATGGGGAAATTTTC
TTCCTGGGAAAAGAAAACATGGTTCAGGGGGGAAAAAAATTTCCGGGGGA
TATCCCCCCCTAAAAATTTTGTGCAAAAAA
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