EY683996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.327e-15 Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSK 383 GF+ + +IAATNR DILD ALLRPGRFDR + V +P+ GR EI +++ K D ++ D++A T GFSG R G+ ++ ++ +I++I A TD K Sbjct: 267 GFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKNTDRTEK 390
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.345e-15 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 338 GF + +IAATNR DILD ALLRPGRFDR + V +PD RGRTEI ++ K + +++L++++ + GFSG R G+ ++ K++ ++I +I Sbjct: 267 GFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKI 375
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.816e-14 Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEV 407 GF+ + VIAATNR DILD ALLRPGRFDR + V +PD RGR EILKVH + K +V L +IA T G SG R + ++ ++ ++D+++ + + +A HEV Sbjct: 271 GFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVH-TRKMNLRNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLG-------AEKRLAQAIAMHEV 394
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.804e-14 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 341 GFE + ++AATNR DILD ALLRPGRFDR + V +P+ GR EILK+H S +V ++++A T G SG R + ++ + D++D+I+ Sbjct: 284 GFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIM 393
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.804e-14 Identity = 40/75 (53.33%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 236 G EG +IVIAATNR D +D AL RPGRFDR++ + VPD GR EILK+H DV+L +A T GF G Sbjct: 319 GLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVG 393 HSP 2 Score: 73.9442 bits (180), Expect = 1.545e-12 Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSG 236 G E ++VIAATNR DI+D AL+R GRFDR V V P I GR +ILK+H + ADVSL +A R G+ G Sbjct: 593 GLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVG 667
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.274e-14 Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIV 341 GF+ + VIAATNR DILD ALLRPGRFDR + V +PD GR EILKVH K +V L VIA T G SG R + ++ ++ ++D+++ Sbjct: 273 GFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVL 381
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 8.194e-14 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRI 338 GF+ + ++AATNR DILD ALLRPGRFDR + + +PD +GR ILK+H DV+L ++ T G +G R + A++S++ +ID++ Sbjct: 286 GFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKL 394
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.070e-13 Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 353 GF+ I VIAATNR DILD ALLRPGRFDR + + +PD GR EI K+H + DV L +A T G SG R + ++ + ++DR++ E Sbjct: 312 GFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKE 425
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.070e-13 Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 353 GF+ I V+ ATNR D LD ALLRPGR DR+V +PD+ GRT+I K+H + D+ +++A P +G R + ++ K+ D++++++ G + Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414
BLAST of EY683996 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.070e-13 Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 12 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGXXXXXXXXXXXXXXGRRGKAAISSKEIDDSIDRIVAGME 353 GF+ I V+ ATNR D LD ALLRPGR DR+V +PD+ GRT+I K+H + D+ +++A P +G R + ++ K+ D++++++ G + Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQ 414 The following BLAST results are available for this feature:
BLAST of EY683996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >EY683996 ID=EY683996; Name=EY683996; organism=Citrus sinensis; type=EST; length=980bpback to top |