EY744979

Overview
NameEY744979
Unique NameEY744979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.991e-62
Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 425
            DSDGAIDGHLREVGLTFHLLKDVPG+ISKNIEKSL+EAFAP+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMR+ S E  K TTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  249 DSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSLFWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKVTTGEGLEWGVLFGFGPGLTVETVVLHSVPV 389          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.991e-62
Identity = 117/141 (82.98%), Postives = 123/141 (87.23%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 425
            DS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            +TRQVLSEYGNMSSACVLFILDEMRK SA+E  +TTGEGLDWGVLFGFGPGLTVETVVLHSVP+
Sbjct:  249 DSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFDPLGISDWNSVFWIAHPGGPAILDQVEEKLGLKPEKLRSTRQVLSEYGNMSSACVLFILDEMRKSSAKEGMSTTGEGLDWGVLFGFGPGLTVETVVLHSVPL 389          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.991e-62
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKT 431
            DS+GAIDGHLREVGLTFHLLKDVPGLISKNI ++L +AF P+GISDWNSIFW+AHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK+SAE+ +ATTGEGLDWGVLFGFGPGLTVETVVLHSVPI T
Sbjct:  253 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVPITT 395          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 3.906e-62
Identity = 115/140 (82.14%), Postives = 125/140 (89.29%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 422
            DS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L++AF+P+GI+DWNSIFWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFI+DEMRKKSAE+  ATTGEGLDWGVLFGFGPGLTVETVVLHS+P
Sbjct:  252 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALTQAFSPLGITDWNSIFWIAHPGGPAILDQVELKLGLKEEKMRATRHVLSEYGNMSSACVLFIIDEMRKKSAEDGAATTGEGLDWGVLFGFGPGLTVETVVLHSLP 391          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.101e-62
Identity = 116/141 (82.27%), Postives = 122/141 (86.52%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 425
            DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            +TR VL EYGNMSSACVLFILDEMRK SA+E  ++TGEGLDWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  249 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPLGISDWNSVFWIAHPGGPAILDQVEAKLGLKPEKLRSTRHVLGEYGNMSSACVLFILDEMRKSSAKEGMSSTGEGLDWGVLFGFGPGLTVETVVLHSVPI 389          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.101e-62
Identity = 117/141 (82.98%), Postives = 123/141 (87.23%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 425
            DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRKKSA++  ATTGEGL+WGVLFGFGPGLTVETVVL SVP+
Sbjct:  254 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRKKSAQDGVATTGEGLEWGVLFGFGPGLTVETVVLRSVPL 394          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.101e-62
Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 425
            DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR V+ EYGNMSSACVLFILDEMRKKSA++  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  255 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVMREYGNMSSACVLFILDEMRKKSAKDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPL 395          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 5.101e-62
Identity = 116/141 (82.27%), Postives = 122/141 (86.52%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 425
            DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYGNMSSACVLFILDEMR+KS E+  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  255 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSVEDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 395          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.662e-62
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKT 431
            DS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF P+GI+D+NSIFW+AHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK+SAE+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI T
Sbjct:  253 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPITT 395          
BLAST of EY744979 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.662e-62
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 3
Query:    3 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKT 431
            DS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF P+GI+D+NSIFW+AHPGGPAILDQV            ATR VLSEYGNMSSACVLFILDEMRK+SAE+ +ATTGEG DWGVLFGFGPGLTVETVVLHSVPI T
Sbjct:  253 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPITT 395          
The following BLAST results are available for this feature:
BLAST of EY744979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_BETVE2.991e-6282.27Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHSY_ANTMA2.991e-6282.98Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHS2_MAIZE2.991e-6281.12Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_CALCH3.906e-6282.14Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHSY_PERFR5.101e-6282.27Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSY_MATIN5.101e-6282.98Chalcone synthase OS=Matthiola incana GN=CHS PE=2 ... [more]
CHSY_CARAN5.101e-6282.27Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHS1_SINAL5.101e-6282.27Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHS6_SORBI6.662e-6281.12Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS5_SORBI6.662e-6281.12Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-F03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744979 ID=EY744979; Name=EY744979; organism=Citrus sinensis; type=EST; length=1035bp
CTGACTCTGACGGTGCAATTGACGGACACTTGCGCGAAGTCGGTCTCACT
TTCCATTTGCTTAAAGACGTCCCCGGCTTGATCTCAAAGAATATAGAGAA
AAGCCTGTCGGAAGCGTTCGCCCCGGTTGGCATCAGCGACTGGAACTCGA
TATTCTGGATCGCTCACCCCGGTGGGCCCGCAATTCTGGACCAAGTGGAG
TCTAAACTCGGCCTCAAAGAGGAGAAGCTGAAGGCCACACGTCAAGTGTT
GAGTGAGTACGGTAACATGTCAAGCGCTTGTGTCCTGTTCATCCTTGACG
AGATGAGAAAGAAGTCTGCTGAGGAAGCGAAAGCCACCACCGGCGAAGGG
CTAGATTGGGGTGTGCTGTTCGGGTTCGGGCCGGGGCTCACCGTCGAGAC
CGTTGTGCTGCACAGTGTCCCCATCAAAACTTGGAGTGACAACTCCCATC
CTGATGTTTAGTGATTCATTAACTTTAGGTTAGCCCTGCTTCCCACTCTT
GGAATGATTAGGCTGATCGTATGAACGGGTTAATTTTGCCCGATTGAACC
TCAAGGGATCGCGCAGTTTTTCTCCCAGAGAGCAGCACCGCAGACAGAAG
CAGCTGCGTTGCAAGGATCACAAACAGAAACGGCGTGCCCCCCACAGAGG
CTACAGAGTTTCCATACAACAGGCCAGGCCATATCCTAACCCCTTCAGAA
CGGGTCCACACGACTCTAATACCCCAGCGCACAAACCACGTTAAGACCCG
ACAGGAGTTGGGAAACAACACTACGAATCACCACACACTACCTCCGCCAA
CAAACAGCACGACCCCGCCATACTGACAAAGAGGGGTCACTAAGACGAGA
GAATACGGCAGCCCAACTCATACCCCCCAGTGAAAAACGCAGCCGCAACT
GAGGACTAGAAGAGTGTGGCCAACGACACCCACACGCAACCCGGCTCCAC
GGCCGCGACGAACCCAACAACGAGCCGAACAGACAGAGAATGTGCGCAAT
CAATCGCACACACTACGACGCCGACAGCAAGTCAC
back to top