EY744942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB6_ORYSJ (Tubulin beta-6 chain OS=Oryza sativa subsp. japonica GN=TUBB6 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.054e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.054e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 3.054e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.054e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.054e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 3.054e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB5_MAIZE (Tubulin beta-5 chain OS=Zea mays GN=TUBB5 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.054e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.054e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 3.054e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB4_ELEIN (Tubulin beta-4 chain OS=Eleusine indica GN=TUBB4 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.054e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.054e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 3.054e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB2_MAIZE (Tubulin beta-2 chain OS=Zea mays GN=TUBB2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.054e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P D++R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDAVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.054e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 3.054e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB1_WHEAT (Tubulin beta-1 chain OS=Triticum aestivum GN=TUBB1 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.054e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.054e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 46.595 bits (109), Expect = 3.054e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB3_PEA (Tubulin beta-3 chain (Fragment) OS=Pisum sativum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.055e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 61 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 176 HSP 2 Score: 50.8322 bits (120), Expect = 3.055e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 177 TLSVHQLVENADECMVLDNEALYD 200 HSP 3 Score: 46.595 bits (109), Expect = 3.055e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 193 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 234
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 3.058e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.058e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 45.4394 bits (106), Expect = 3.058e-66 Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TP+FGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFP 243
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB1_AVESA (Tubulin beta-1 chain (Fragment) OS=Avena sativa GN=TUBB1 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.061e-66 Identity = 94/116 (81.03%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+R+ PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 8 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 123 HSP 2 Score: 50.8322 bits (120), Expect = 3.061e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 124 TLSVHQLVENADECMVLDNEALYD 147 HSP 3 Score: 46.595 bits (109), Expect = 3.061e-66 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TPSFGDLNHLISATM+ L P Sbjct: 140 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP 181
BLAST of EY744942 vs. ExPASy Swiss-Prot
Match: TBB3_WHEAT (Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.977e-66 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PRVRDSIRSRPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 348 P DS+RS PYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVVRKEAENCDCLQGFQVCH ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA Sbjct: 70 PGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185 HSP 2 Score: 50.8322 bits (120), Expect = 3.977e-66 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 350 TLSVHQLVENADECMVLDNEALYE 421 TLSVHQLVENADECMVLDNEALY+ Sbjct: 186 TLSVHQLVENADECMVLDNEALYD 209 HSP 3 Score: 45.4394 bits (106), Expect = 3.977e-66 Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 399 LTTKLFMNICFRKSTLSTPSFGDLNHLISATMNRCPSPLEVP 524 L + +ICFR L+TP+FGDLNHLISATM+ L P Sbjct: 202 LDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFP 243 The following BLAST results are available for this feature:
BLAST of EY744942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744942 ID=EY744942; Name=EY744942; organism=Citrus sinensis; type=EST; length=960bpback to top |