EY744940

Overview
NameEY744940
Unique NameEY744940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_SYNY3 (Riboflavin biosynthesis protein ribBA OS=Synechocystis sp. (strain PCC 6803) GN=ribBA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.470e-43
Identity = 89/143 (62.24%), Postives = 109/143 (76.22%), Query Frame = 1
Query:   13 EHIAMVKGDIGD--GQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVP 435
            EHIA+VKGD  +   Q ++VR+HSECLTGD  GS RCDC  QL  A++ +E  G GV+VYLR  EGRGIGL +KL+AY+LQD G DTVEANE LG P D R+YG+GAQML DLGV+ ++L+TNNP K  GLKGYGL +  +VP
Sbjct:  235 EHIAIVKGDPSEFGQQPVMVRMHSECLTGDALGSLRCDCRMQLQAALKMLENHGLGVVVYLR-QEGRGIGLVNKLKAYSLQDLGYDTVEANERLGFPADLRDYGMGAQMLNDLGVKQIRLITNNPRKIAGLKGYGLEIVERVP 376          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLMU (Riboflavin biosynthesis protein ribBA OS=Chlamydia muridarum GN=ribBA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.385e-43
Identity = 82/159 (51.57%), Postives = 111/159 (69.81%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            EH A+VKGDI + + + VRVHSECLTGD+ GS RCDCG QL +AM+ I   G GV+VYLRG EGRGIG GHK++AY LQD G DTVEAN +L  P+D+REYG+ AQ+L+DL + +++L+T+NP K+  L+  G+ +  ++     +   N  Y     D
Sbjct:  239 EHFALVKGDIREQESVPVRVHSECLTGDVLGSCRCDCGAQLDMAMRYIAEQGLGVIVYLRGQEGRGIGFGHKIQAYALQDLGYDTVEANLQLSFPIDAREYGVAAQILKDLRLTSVRLITHNPKKFFELQRLGIHILDRIVLPVIVSSENERYLRTKKD 397          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_BACTN (Riboflavin biosynthesis protein ribBA OS=Bacteroides thetaiotaomicron GN=ribBA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.226e-42
Identity = 88/153 (57.52%), Postives = 108/153 (70.59%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            EH+A+ KG   + + ILVRVHS C TGDI GS RCDCG+QL  AM+ IE  G+GV+VYL   EGRGIGL  K++AY LQ+DG DTV+AN  LG   D R+YG+GAQ+LR+LGV  MKL+TNNP K VGL+ YGL +   VP  T  +  N  Y
Sbjct:  237 EHMAIFKGTWNEDEPILVRVHSSCATGDILGSHRCDCGEQLHKAMEMIEKEGKGVVVYLN-QEGRGIGLMEKMKAYKLQEDGMDTVDANLCLGHLADERDYGVGAQILRELGVHKMKLLTNNPVKRVGLEAYGLEIVENVPVETVPNPYNERY 388          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_CHLTR (Riboflavin biosynthesis protein ribBA OS=Chlamydia trachomatis GN=ribBA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.601e-42
Identity = 83/153 (54.25%), Postives = 111/153 (72.55%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            +H A+VKGDI + + + VRVHSECLTGDI GS RCDCG QL +AM+ I   G GV+VYLRG EGRGIG GHK+RAY LQD G DTV+AN +LG P+D+REYG+ AQ+L+DL + +++L+T+NP K+  L+  G+ V  ++     +   N  Y
Sbjct:  239 QHFALVKGDIHEQEAVPVRVHSECLTGDILGSCRCDCGAQLDMAMRYIAEEGLGVIVYLRGQEGRGIGFGHKIRAYALQDLGYDTVDANLQLGFPIDAREYGMAAQVLKDLQLTSVRLITHNPRKFFELQRLGIHVLDRIILPVSISTENEGY 391          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_PARD8 (Riboflavin biosynthesis protein ribBA OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ribBA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.566e-42
Identity = 86/153 (56.21%), Postives = 108/153 (70.59%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            EHIA++KG     + ILVRVHS C TGDIFGS RC+CG+QL  AM++I+  G+GV+VYL   EGRGIGL  K++AY LQ+DG DTV+AN  LG   D R+YG+GAQ+LR +GV  M+LM+NNP K VGL+ YGL V   VP     +  N  Y
Sbjct:  238 EHIALIKGKFEKDEPILVRVHSSCATGDIFGSMRCECGEQLHEAMRRIDQEGKGVIVYLN-QEGRGIGLMEKMKAYKLQEDGLDTVDANLHLGHQADERDYGVGAQILRHIGVTKMRLMSNNPVKRVGLEAYGLEVVENVPIEVKPNPYNEFY 389          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBA_ARCFU (GTP cyclohydrolase-2 OS=Archaeoglobus fulgidus GN=ribA PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.658e-42
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAV 420
            E +A+VKG + +G D+LVR+HSECLTGD+F S RCDCGDQL  A++ I+  G+GV +Y+RGHEGRGIGL +KL AY LQ++G+DTV+AN ELG P D R YGI AQ+L DL V++++L+TNNP K   LK YG  +
Sbjct:  212 EIVALVKGRVDEG-DVLVRIHSECLTGDVFHSLRCDCGDQLENALKMIDREGKGVAIYMRGHEGRGIGLINKLMAYKLQEEGKDTVDANIELGFPPDMRSYGIAAQILMDLKVKSIRLLTNNPLKIEELKKYGFKI 346          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_UNCTG (Riboflavin biosynthesis protein ribBA OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=ribBA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.945e-42
Identity = 84/152 (55.26%), Postives = 110/152 (72.37%), Query Frame = 1
Query:   16 HIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            HIA+VKG + + Q++LVRVHS C TGDIF S RCDCGDQL  A++ +  A +GV++Y+   EGRGIGL +KL+AY LQ+ G DTVEAN+ LG   D R+YGIGAQML +LG++++ LMTNNP K  GL+ YGL +  +VP      K+N  Y
Sbjct:  238 HIAVVKGVVKNRQNVLVRVHSSCETGDIFHSLRCDCGDQLETALKAVGEAEQGVVLYIH-QEGRGIGLANKLKAYRLQEKGMDTVEANKALGFDPDLRDYGIGAQMLSELGIKSINLMTNNPGKINGLESYGLKITKRVPLEISPSKSNEKY 388          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_CYTH3 (Riboflavin biosynthesis protein ribBA OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=ribBA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.945e-42
Identity = 83/158 (52.53%), Postives = 108/158 (68.35%), Query Frame = 1
Query:   16 HIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTYAHPSPD 489
            H+A++KG     + ++VRVHS C+TGDIFGS RCDCG QL  AM+ I+  G+GV++Y+   EGRGIGL +KL+AY LQ+ GRDTVEAN ELG  +D R+YG GAQ+LRDL +  ++L+TNNP K   L GYGL +   VP   P +  N  Y     D
Sbjct:  239 HLALIKGTWEKDEPVMVRVHSSCVTGDIFGSCRCDCGPQLHKAMEMIQQEGKGVILYMN-QEGRGIGLLNKLKAYKLQEQGRDTVEANLELGFKMDQRDYGTGAQILRDLNISKLRLITNNPVKRAALAGYGLEITEAVPIEIPSNPHNLEYLKTKRD 395          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_PORGI (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis GN=ribBA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.770e-41
Identity = 82/153 (53.59%), Postives = 108/153 (70.59%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            EHIA+ KG   + + ILVR+HS C TGDIFGS RCDCG QL  AM++IE  G+G ++YL   EGRGIGL  K++AY LQ+ G DT++AN  LG   D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL +   +P  T  ++ N  Y
Sbjct:  238 EHIALFKGTWDENEPILVRMHSSCATGDIFGSMRCDCGGQLLQAMEKIEKEGKGAIIYLN-QEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPLETAPNRYNEFY 389          
BLAST of EY744940 vs. ExPASy Swiss-Prot
Match: RIBBA_PORG3 (Riboflavin biosynthesis protein ribBA OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ribBA PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.770e-41
Identity = 82/153 (53.59%), Postives = 108/153 (70.59%), Query Frame = 1
Query:   13 EHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGKVPPNTPLHKANRTY 471
            EHIA+ KG   + + ILVR+HS C TGDIFGS RCDCG QL  AM++IE  G+G ++YL   EGRGIGL  K++AY LQ+ G DT++AN  LG   D R+YGIGAQ+LR LG++ M+LMTNNP K +GL+ +GL +   +P  T  ++ N  Y
Sbjct:  238 EHIALFKGTWDENEPILVRMHSSCATGDIFGSMRCDCGGQLLQAMEKIEKEGKGAIIYLN-QEGRGIGLMEKMKAYKLQEQGMDTIDANLCLGHKADERDYGIGAQILRLLGIKKMRLMTNNPVKRIGLEAFGLEIVENIPLETAPNRYNEFY 389          
The following BLAST results are available for this feature:
BLAST of EY744940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
RIBBA_SYNY32.470e-4362.24Riboflavin biosynthesis protein ribBA OS=Synechocy... [more]
RIBBA_CHLMU9.385e-4351.57Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBBA_BACTN1.226e-4257.52Riboflavin biosynthesis protein ribBA OS=Bacteroid... [more]
RIBBA_CHLTR1.601e-4254.25Riboflavin biosynthesis protein ribBA OS=Chlamydia... [more]
RIBBA_PARD83.566e-4256.21Riboflavin biosynthesis protein ribBA OS=Parabacte... [more]
RIBA_ARCFU4.658e-4259.56GTP cyclohydrolase-2 OS=Archaeoglobus fulgidus GN=... [more]
RIBBA_UNCTG7.945e-4255.26Riboflavin biosynthesis protein ribBA OS=Unculture... [more]
RIBBA_CYTH37.945e-4252.53Riboflavin biosynthesis protein ribBA OS=Cytophaga... [more]
RIBBA_PORGI1.770e-4153.59Riboflavin biosynthesis protein ribBA OS=Porphyrom... [more]
RIBBA_PORG31.770e-4153.59Riboflavin biosynthesis protein ribBA OS=Porphyrom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-006-B11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744940 ID=EY744940; Name=EY744940; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGTGAGCATATAGCAATGGTTAAGGGTGACATTGGGGATGG
ACAAGATATTCTTGTGAGAGTGCACTCAGAGTGTCTCACTGGAGATATAT
TTGGATCAGCCAGATGTGATTGTGGTGATCAGCTTGCACTTGCAATGCAG
CAGATTGAGGCTGCTGGCAGGGGTGTATTAGTTTATCTCCGTGGTCATGA
GGGAAGGGGCATTGGTTTAGGCCACAAGCTTCGCGCTTATAACTTGCAGG
ACGATGGGCGTGATACAGTTGAAGCAAATGAGGAATTGGGATTGCCTGTT
GACTCACGGGAATATGGCATTGGTGCACAGATGCTAAGGGATCTTGGTGT
TCGAACAATGAAGCTGATGACAAACAACCCTTCCAAGTATGTTGGACTCA
AGGGTTATGGTTTGGCTGTGGCAGGAAAGGTTCCCCCAAACACTCCCCTT
CACAAGGCAAACAGGACATATGCCCACCCCAGCCCTGATCCATGCGCCAC
TTCATGCGTTCAGAATCCCCGGGGCCGCGTAGCACCATCCTCCAAGCCAG
GCAACGACAAAAAGAAGAACAAAGCCTCAAAGAGCACGCCTACGACAAAA
AAACAGGAATCATCGATGAGGTCAAGCTCAGCAACCAACACCCATAACCA
CCAAGAACCCAACAAACCCGGCCAGCCGCAGCCCCGCCCAACAACCCTAC
ACCATGCCCCTACCCACCCGACCACACGCGCGAGACCCCCAACGGCCATC
ACACCATCCAGCCCAGCGTCAGCCAACCCACACGAGGCCAGCTACGGAGC
CCCCCATACCACTCCCCACACCCACCAGACAAAGTAGCCGCAAAACACCA
TGTAACACACACGGCCTAGGCAACCAAGGCCAC
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