EY744893

Overview
NameEY744893
Unique NameEY744893
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length998
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.289e-46
Identity = 96/156 (61.54%), Postives = 113/156 (72.44%), Query Frame = 2
Query:   74 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 538
            S KKI LKSSDG +FEVEE  A + QTI HM EDDC D  IPLP VT  IL  VIEYC KH V+A +        +++DLK WD +F++  Q+T+FDLI+AANYLNIK LLDL CQTVADMIK  T E  RK FNI+ND++ +EEE VRRENQW F
Sbjct:    2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHHVDAAN------PCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGF 151          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: ASK15_ARATH (SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.683e-46
Identity = 96/165 (58.18%), Postives = 119/165 (72.12%), Query Frame = 2
Query:   74 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGD--------KKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEE-VRRENQWAF 538
            S  KI L SSDGE+F+VEE VA + Q +KH++EDDC    IPL NVT  ILS V+EYCKKHV+    D        KK D   + +L  WDA+F+K +D  T+F LILAANYLN++GLL LTCQTVAD IK KTPEE+R+ FNI+NDF+ +EEEE +R+EN WAF
Sbjct:    2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAF 166          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.091e-45
Identity = 94/157 (59.87%), Postives = 116/157 (73.89%), Query Frame = 2
Query:   74 SEKKITLKSSDGETFEVEETVALESQTI-KHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 538
            S KKI LKSSDG +FEVEE  A + Q I  HM E+DC D  IPLPNVT  IL+ VIEYC KH V+A +        ++DDLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND +P+EE  +RREN+WAF
Sbjct:    2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKHHVDAAN------PCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAF 152          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_XENLA (S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_RAT (S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1 PE=2 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_PONAB (S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_MOUSE (S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_MACFA (S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_HUMAN (S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
BLAST of EY744893 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.057e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 2
Query:   86 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 532
            I L+SSDGE FEV+  +A +S TIK M+ED     +  D  +PLPNV + IL KVI++C  H +     + D+   +  DD+  WD +F+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW
Sbjct:    4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQW 159          
The following BLAST results are available for this feature:
BLAST of EY744893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
ASK10_ARATH1.289e-4661.54SKP1-like protein 10 OS=Arabidopsis thaliana GN=AS... [more]
ASK15_ARATH1.683e-4658.18SKP1-like protein 15 OS=Arabidopsis thaliana GN=AS... [more]
ASK9_ARATH1.091e-4559.87SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK... [more]
SKP1_XENLA2.057e-4458.33S-phase kinase-associated protein 1 OS=Xenopus lae... [more]
SKP1_RAT2.057e-4458.33S-phase kinase-associated protein 1 OS=Rattus norv... [more]
SKP1_PONAB2.057e-4458.33S-phase kinase-associated protein 1 OS=Pongo abeli... [more]
SKP1_MOUSE2.057e-4458.33S-phase kinase-associated protein 1 OS=Mus musculu... [more]
SKP1_MACFA2.057e-4458.33S-phase kinase-associated protein 1 OS=Macaca fasc... [more]
SKP1_HUMAN2.057e-4458.33S-phase kinase-associated protein 1 OS=Homo sapien... [more]
SKP1_CHICK2.057e-4458.33S-phase kinase-associated protein 1 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-005-F11-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744893 ID=EY744893; Name=EY744893; organism=Citrus sinensis; type=EST; length=998bp
CAGCTGCAGTACGGTCGGATTCCGGGTCGACCCACGCGTCCGAGCGAAAC
CGTAACTCTCAGAAACGATGTCGTCTGAGAAGAAGATCACTCTGAAGAGT
TCGGACGGTGAGACGTTCGAGGTGGAGGAGACGGTGGCCCTCGAGTCGCA
GACAATCAAGCACATGGTGGAGGACGACTGCGCCGACACCGTAATCCCGC
TGCCGAATGTGACGAGCACGATTCTCTCGAAGGTTATCGAGTACTGCAAG
AAGCACGTTGAGGCTGGGTCAGGGGACAAGAAGGACGACAAGTCGACCGA
GGATGATCTCAAGACCTGGGATGCAGACTTCGTCAAGGTTGATCAGAATA
CCCTCTTTGACCTAATCTTGGCCGCCAATTACCTGAACATTAAGGGTTTG
CTGGACTTGACCTGCCAAACTGTTGCAGACATGATCAAGGGGAAGACTCC
AGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCTCTCCCGATG
AAGAAGAGGAGGTTCGGAGAGAGAACCAATGGGCATTCTAGTGAAGGAAC
TGAAGTGATGAAGGCTCGGGTATTTTATATTTTGTGATAGGGATGTCGAT
ATAATGGTACTGGGCCTTTTCGTATGGTTGCCAGTAGGGGTCTCTTTTCG
ACCATTCACTTTCCCTTTTCCGAGAAACCTGTATCTGCTCCCTATATTGA
GTGCNTTGGAACCCTCGTCCTATTTCCCTTTTTCTTTTCTGTTCCTTGTC
CTCACAAACACAAAAACAGAACGTAGCCCCGCCTCTCCCACGGCTCCGGT
TTAATCTCGGCCGCACTGCGAAGTCATAAATCCCAACTGTGCGGCGCCCC
AAGTTGCATAGCCCCCGACCCCGCCGTACTGAACCCTCGCGGTCTGCTCA
GAACCTGCCCCTAATTCCACACGCACTCACACACTACCATATCACCACCC
ACCCCCGACCCTATCACATCCAGCACCTGGAACTACCAAACGCTCCAC
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