EY680422

Overview
NameEY680422
Unique NameEY680422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CLOBH (Elongation factor P OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=efp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV-FKETQAIH 576
            S+ D++ G+  E DG  + V+EFLHVKPGKGAAFVRTKL+N ++G   E TF     ++EA +  KE Q ++
Sbjct:    3 SAGDLRKGTTFEQDGQVYVVVEFLHVKPGKGAAFVRTKLKNAITGAVTETTFNPTAKLQEAVIERKEMQYLY 74          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CLOB6 (Elongation factor P OS=Clostridium botulinum (strain 657 / Type Ba4) GN=efp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV-FKETQAIH 576
            S+ D++ G+  E DG  + V+EFLHVKPGKGAAFVRTKL+N ++G   E TF     ++EA +  KE Q ++
Sbjct:    3 SAGDLRKGTTFEQDGQVYVVVEFLHVKPGKGAAFVRTKLKNAITGAVTETTFNPTAKLQEAVIERKEMQYLY 74          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CLOB1 (Elongation factor P OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=efp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV-FKETQAIH 576
            S+ D++ G+  E DG  + V+EFLHVKPGKGAAFVRTKL+N ++G   E TF     ++EA +  KE Q ++
Sbjct:    3 SAGDLRKGTTFEQDGQVYVVVEFLHVKPGKGAAFVRTKLKNAITGAVTETTFNPTAKLQEAVIERKEMQYLY 74          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CALS8 (Elongation factor P OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=efp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 1
Query:  367 SNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFR 522
            + D + G  IE DG  ++V+EFLHVKPGKGAAFVRTKL+N  +G  +E+TFR
Sbjct:    4 AGDFRRGLTIEYDGQIFQVIEFLHVKPGKGAAFVRTKLKNIKTGAVIEKTFR 55          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_ANATD (Elongation factor P OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=efp PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 1
Query:  367 SNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFR 522
            + D + G  IE DG  ++V+EFLHVKPGKGAAFVRTKL+N  +G  +E+TFR
Sbjct:    4 AGDFRRGLTIEYDGQIFQVIEFLHVKPGKGAAFVRTKLKNIKTGAVIEKTFR 55          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_PSYA2 (Elongation factor P OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=efp PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  358 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV 552
            +FS+N+ K G  + +DG P  +LE   VKPGKG AF R KLRN  SG  +E+TF++G ++E ADV
Sbjct:    3 SFSTNEFKAGLKVMLDGNPCAILENEFVKPGKGQAFNRVKLRNLRSGKVLEQTFKSGDSLEAADV 67          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP2_CHLMU (Elongation factor P 2 OS=Chlamydia muridarum GN=efp2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 29/73 (39.73%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETQAIHVT 582
            S+++ +VG  +E+DG P+ +L+   VKPGKG AF R K++N+++G  +E+TF++G ++E ADV ++   +  T
Sbjct:    5 STSEFRVGLRVEIDGQPYVILQNDFVKPGKGQAFNRIKVKNFLTGRVIEKTFKSGESIETADVREQQMRLLYT 77          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_DESRM (Elongation factor P OS=Desulfotomaculum reducens (strain MI-1) GN=efp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTF 519
            S++D + G  +E+D   ++++EF HVKPGKGAAFVRTK+RN  +G  +ERTF
Sbjct:    3 STSDFRTGLTVEIDNDVYQIIEFQHVKPGKGAAFVRTKMRNMRTGAVIERTF 54          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_DESDA (Elongation factor P OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=efp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 1
Query:  361 FSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV 552
            +S+ D + G  IEV+G P+ +++F H KPGKG A VRTKLRN ++G   + TFR+G  V + D+
Sbjct:    2 YSTTDFRKGLKIEVEGIPYEIVDFQHFKPGKGGAMVRTKLRNILTGRMQDITFRSGEKVNKPDL 65          
BLAST of EY680422 vs. ExPASy Swiss-Prot
Match: EFP_CLOTE (Elongation factor P OS=Clostridium tetani GN=efp PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
Query:  364 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV-FKETQAIH 576
            S+ D++ G+  E+DG  + V++FLHVKPGKGAAFVRTKLRN ++G   E TF      +EA +  KE Q ++
Sbjct:    3 SAGDLRKGNTFELDGQVYTVVDFLHVKPGKGAAFVRTKLRNVLNGGLKETTFNPTEKFQEAVIERKEMQYLY 74          
The following BLAST results are available for this feature:
BLAST of EY680422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
EFP_CLOBH5.179e-1148.61Elongation factor P OS=Clostridium botulinum (stra... [more]
EFP_CLOB65.179e-1148.61Elongation factor P OS=Clostridium botulinum (stra... [more]
EFP_CLOB15.179e-1148.61Elongation factor P OS=Clostridium botulinum (stra... [more]
EFP_CALS85.179e-1159.62Elongation factor P OS=Caldicellulosiruptor saccha... [more]
EFP_ANATD5.179e-1159.62Elongation factor P OS=Anaerocellum thermophilum (... [more]
EFP_PSYA26.764e-1150.77Elongation factor P OS=Psychrobacter arcticus (str... [more]
EFP2_CHLMU6.764e-1139.73Elongation factor P 2 OS=Chlamydia muridarum GN=ef... [more]
EFP_DESRM8.834e-1153.85Elongation factor P OS=Desulfotomaculum reducens (... [more]
EFP_DESDA8.834e-1146.88Elongation factor P OS=Desulfovibrio desulfuricans... [more]
EFP_CLOTE8.834e-1148.61Elongation factor P OS=Clostridium tetani GN=efp P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680422 ID=EY680422; Name=EY680422; organism=Citrus sinensis; type=EST; length=846bp
TGATACGCTGCGTTCATTCTACTACTGTTTTATTCTCATTTTTTTCAAAA
AAAAAATAATAATAGGGGAAGAAGGTATTGGCTGCTCTCAAGTCTCGATA
TGCTTTAGGCGGTAGTACCCAGACTCTCATTCCGGGACACACTCCTTATC
TAAGAGAGCGTGTCGCGGCCTTCTGTATTTTGTTTGATAAAACCAAATAT
CATTTCTCACAGATAACCAACCACCATGGCGGGAACCGCCGCCACCGTTA
ATCTCTCATCAGCGCCCTATCTCCTCCGCCGTTCGTCATTTACTACACTC
TCGTCAAAGCCGTCCGTACTCCCAATGCGACCACGTTCCAAATTTCCCAG
GATCTACGCGTTTAGTAGCAACGATATCAAAGTGGGTTCCAACATTGAAG
TTGACGGAGCTCCGTGGCGTGTTTTGGAGTTTCTTCATGTGAAACCTGGG
AAAGGAGCAGCATTTGTGAGGACCAAGCTTCGCAATTATATGTCTGGAAC
CACTGTTGAGAGAACTTTTCGTGCAGGGATTACGGTTGAAGAGGCAGATG
TATTCAAGGAAACCCAAGCAATTCACGTAACAAGATGGCTCCATGTTTGT
GTTTATGGGATCTGACCACATTTGAAGAAGTTCCTCCTAATGAGACAGAT
GTCGGGAAAAAAAAAAAAGTGGGTGAAAAAAGGGAATGGGATGGCAATTT
TCCTATTCTGGAAAGGGAAAAATTTATTGATTTTGAAAGTTCCCATTTAC
GTTTCAGCTGAACGGGGGTTGAAGGTTGATCCCGGGCCTTAAAGGGGGGA
CCCGGGCTTCGGGGGGGGTCAAAAACCTCCAACCCCTTAAAACCGT
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