EY680407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.482e-13 Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPQSNPGPGSNLGWS 731 I FTQE +G TTV G +SG+ PG H +H G+ N ++TG + PA + G + N+TV DGTA F I K + L G S+IGR +V+H++P G L S Sbjct: 18 IHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPDDLGKGGHELSKS 135
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.936e-13 Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNPQSNPGPGSNLGWS 731 I FTQEG+G T V G++SG+ PG H +H G+ N ++TG + PA + G + N+T DG A + ++ L+GP+S+IGR +V+H++P G L S Sbjct: 18 IFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKS 135
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC2_MAIZE (Superoxide dismutase [Cu-Zn] 2 OS=Zea mays GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.529e-13 Identity = 43/118 (36.44%), Postives = 62/118 (52.54%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNPQSNPGPGSNLGWS 731 I F+QEG+G TTV G+ISG+ PG H +H G+ N ++TG F P G + G + N+T DG I ++ L+GP S+IGR +V+H++P G L S Sbjct: 17 IFFSQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPVGKEHGAPEDEDRHAGDLGNVTAGEDGVVNVNITDSQIPLAGPHSIIGRAVVVHADPDDLGKGGHELSKS 134
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.357e-13 Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSN 689 + F QEG G TT+ G++SG+ PG H +H G+ N ++TG F PAG + G + N+TV DGT F + ++ L+G +SV+GR +V+H++ Sbjct: 18 VFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHAD 121
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLHSNP 692 I F+QEG+G T+V G++SG+ PG H +H G+ N ++TG F P G + G + NIT DG A + ++ L+G S+IGR +V+H++P Sbjct: 18 IFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADP 122
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 8.134e-12 Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 414 ISFTQEGNGT-TTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNP 692 I F+QE G TTV G++SG+ PG H +H G+ N ++TG + P G G + N+TV DGTA F I K + L G S+IGR +V+H++P Sbjct: 18 IFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVHADP 123
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11 Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNI-SGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGKVALSGPDSVIGRGLVLHSNPQSNPGPGSN 719 + F QEGN +G I G+TPG+H +H +G+ N I+ G F PA K G + N+T D +G A I K++L+GP S+IGR +V+H + G G N Sbjct: 19 VYFEQEGNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITDKISLTGPYSIIGRTMVIHEK-ADDLGRGGN 131
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKP-----------AGTKGVIDNITVDVDGTATFKIY-GKVALSGPDSVIGRGLVLH 683 ++ +QE NG TTV+ ++G+TPG H +H +G+ N ++TG+ F P G + NI DG A I ++ LSGPDSVIGR LV+H Sbjct: 6 VTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVH 107
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 414 ISFTQEGNGTTTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGT-----------KGVIDNITVDVDGTATFKIYG-KVALSGPDSVIGRGLVLH 683 ++ +QE +G TTV I+G+TPG+H +H +G+ N ++TGA F P G G + NI + +G A I ++ LSGP++VIGR LV+H Sbjct: 77 VTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVH 178
BLAST of EY680407 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 45/113 (39.82%), Postives = 58/113 (51.33%), Query Frame = 3 Query: 414 ISFTQEGNGT-TTVEGNISGVTPGDHALVIHTYGNVNNVWITTGAPFKPAGTK-----------GVIDNITVDVDGTATFKIYGK-VALSGPDSVIGRGLVLHSNPQSNPGPG 713 I F QE G+ TT+ G I G+TPG H +H YG+ N I+ G F P G + NI DGTA I K V L GP+S+IGR LV+H++ Q + G G Sbjct: 18 IRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHAD-QDDLGKG 129 The following BLAST results are available for this feature:
BLAST of EY680407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680407 ID=EY680407; Name=EY680407; organism=Citrus sinensis; type=EST; length=859bpback to top |