EY680384

Overview
NameEY680384
Unique NameEY680384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_STAAU (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus GN=pdhD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.060e-20
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L GF+ +M   V + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ +GV+    G ++VD+ SRT++ +I+A+GD+   + L   A  E    A+ +  GQ  + DY  +P   F  P L+ VG SE QA E+G
Sbjct:  212 LGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAI-DGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEG 372          

HSP 2 Score: 28.1054 bits (61), Expect = 1.060e-20
Identity = 13/58 (22.41%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTRRVAAP 765
            ++GA + G  A +I+  + +A++ G        T+  HP+  E  +T+ +  + +  P
Sbjct:  409 LIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGE--MTMEAAEKAIGYP 464          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_STAAS (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=pdhD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.060e-20
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L GF+ +M   V + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ +GV+    G ++VD+ SRT++ +I+A+GD+   + L   A  E    A+ +  GQ  + DY  +P   F  P L+ VG SE QA E+G
Sbjct:  212 LGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAI-DGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEG 372          

HSP 2 Score: 28.1054 bits (61), Expect = 1.060e-20
Identity = 13/58 (22.41%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTRRVAAP 765
            ++GA + G  A +I+  + +A++ G        T+  HP+  E  +T+ +  + +  P
Sbjct:  409 LIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGE--MTMEAAEKAIGYP 464          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_STAAR (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=pdhD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.060e-20
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L GF+ +M   V + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ +GV+    G ++VD+ SRT++ +I+A+GD+   + L   A  E    A+ +  GQ  + DY  +P   F  P L+ VG SE QA E+G
Sbjct:  212 LGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAI-DGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEG 372          

HSP 2 Score: 28.1054 bits (61), Expect = 1.060e-20
Identity = 13/58 (22.41%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTRRVAAP 765
            ++GA + G  A +I+  + +A++ G        T+  HP+  E  +T+ +  + +  P
Sbjct:  409 LIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGE--MTMEAAEKAIGYP 464          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_STAAN (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain N315) GN=pdhD PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.060e-20
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L GF+ +M   V + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ +GV+    G ++VD+ SRT++ +I+A+GD+   + L   A  E    A+ +  GQ  + DY  +P   F  P L+ VG SE QA E+G
Sbjct:  212 LGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAI-DGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEG 372          

HSP 2 Score: 28.1054 bits (61), Expect = 1.060e-20
Identity = 13/58 (22.41%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTRRVAAP 765
            ++GA + G  A +I+  + +A++ G        T+  HP+  E  +T+ +  + +  P
Sbjct:  409 LIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGE--MTMEAAEKAIGYP 464          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_STAAM (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhD PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.060e-20
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L GF+ +M   V + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ +GV+    G ++VD+ SRT++ +I+A+GD+   + L   A  E    A+ +  GQ  + DY  +P   F  P L+ VG SE QA E+G
Sbjct:  212 LGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAI-DGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEG 372          

HSP 2 Score: 28.1054 bits (61), Expect = 1.060e-20
Identity = 13/58 (22.41%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTRRVAAP 765
            ++GA + G  A +I+  + +A++ G        T+  HP+  E  +T+ +  + +  P
Sbjct:  409 LIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGE--MTMEAAEKAIGYP 464          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_STAAC (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain COL) GN=pdhD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.060e-20
Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L GF+ +M   V + ++ +G+ +      K   +++  +KV  +  GEE  I AD VL   GR PNT  L L+ +GV+    G ++VD+ SRT++ +I+A+GD+   + L   A  E    A+ +  GQ  + DY  +P   F  P L+ VG SE QA E+G
Sbjct:  212 LGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAI-DGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEG 372          

HSP 2 Score: 28.1054 bits (61), Expect = 1.060e-20
Identity = 13/58 (22.41%), Postives = 29/58 (50.00%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTRRVAAP 765
            ++GA + G  A +I+  + +A++ G        T+  HP+  E  +T+ +  + +  P
Sbjct:  409 LIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGE--MTMEAAEKAIGYP 464          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: YKGC_ECOLI (Probable pyridine nucleotide-disulfide oxidoreductase ykgC OS=Escherichia coli (strain K12) GN=ykgC PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.061e-20
Identity = 59/193 (30.57%), Postives = 103/193 (53.37%), Query Frame = 3
Query:   15 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFG-GQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETDK 590
            D ++   +A  L  +G+++     ++ +   E  ++V ++H + +  D +L A+GR P T  L+ +  G+ V++ GA+ VD+   T   +IWA+GDVT  +  T ++L +       + G G+    D ++VP +VF  PPLS VG++EEQA E G  DI V T     +         + V+K +VD +T +
Sbjct:  198 DRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHAQ-LAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKRLHTTADNIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESG-ADIQVVTLPVAAIPRARVMNDTRGVLKAIVDNKTQR 388          

HSP 2 Score: 24.2534 bits (51), Expect = 1.061e-20
Identity = 12/54 (22.22%), Postives = 27/54 (50.00%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGFVTLRSVTR 750
            ++LGAS+   ++ E++  + + +  G   +     +  HPS +E    L S+ +
Sbjct:  388 RMLGASLLCVDSHEMINIVKMVMDAGLPYSILRDQIFTHPSMSESLNDLFSLVK 441          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH2_HALMA (Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marismortui GN=lpdA2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.130e-20
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 3
Query:    3 LRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIV----ADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            L G++D++  VV    E  GI+ +         +++E I+V T   +E+V    A+  L A GR P T  L L  + ++ D+ G +  D+  RT   S++AVGDV     L   A+ EG   A+    G+P   D++ +P AVF  P ++ VG++E +A   G
Sbjct:  215 LPGYEDDIATVVRDRAEELGIDFNFGEAADNWEETDEGIRVQTVDEDEVVTEYNAEKCLVAVGREPVTDTLALDNIDLQTDENGVIPTDDQCRTAFESVFAVGDVAGEPMLAHKAMAEGEVAARAA-AGEPAAFDHQAIPAAVFTDPEIATVGMTESEAEAAG 376          

HSP 2 Score: 34.2686 bits (77), Expect = 5.130e-20
Identity = 14/43 (32.56%), Postives = 25/43 (58.14%), Query Frame = 1
Query:  592 VLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAE 720
            +LGA + GPEA E++  + + ++ GA       T+  HP+ +E
Sbjct:  413 LLGAQIVGPEASELIAELGLGIEMGARLEDIAGTIHTHPTLSE 455          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: MERA_STAES (Mercuric reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=merA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 3
Query:   12 FDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETDK 590
            +D E+   +  +L  +G+NL    T +++ ++ +S  +  + +G+E  I AD VL ATGR PNT+ LNL++ GV+  + G V  +E  +T+   I+A GDVT       VA  EG   A    G    K D R VP   F  P ++ VGL+E+QA E+G  D+       + +   +   +   V KLVV+A+T K
Sbjct:  289 YDPEISEAIDESLTEQGLNLITGVTYQKVEQNGKSTSIYIEVNGQEQVIEADQVLVATGRKPNTETLNLESAGVKTGKKGEVLTNEYLQTSNNRIYAAGDVTLGPQFVYVAAYEGGIVANNALGLAKRKIDLRFVPGVTFTNPSIATVGLTEQQAKEKGY-DVKTSVLPLDAVPRALVNHETTGVYKLVVNAQTQK 483          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: MERA_STAAU (Mercuric reductase OS=Staphylococcus aureus GN=merA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 3
Query:   12 FDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITD-HGEE--IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETDK 590
            +D E+   +  +L  +G+NL    T +++ ++ +S  +  + +G+E  I AD VL ATGR PNT+ LNL++ GV+  + G V  +E  +T+   I+A GDVT       VA  EG   A    G    K D R VP   F  P ++ VGL+E+QA E+G  D+       + +   +   +   V KLVV+A+T K
Sbjct:  289 YDPEISEAIDESLTEQGLNLITGVTYQKVEQNGKSTSIYIEVNGQEQVIEADQVLVATGRKPNTETLNLESAGVKTGKKGEVLTNEYLQTSNNRIYAAGDVTLGPQFVYVAAYEGGIVANNALGLAKRKIDLRFVPGVTFTNPSIATVGLTEQQAKEKGY-DVKTSVLPLDAVPRALVNHETTGVYKLVVNAQTQK 483          
The following BLAST results are available for this feature:
BLAST of EY680384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
DLDH_STAAU1.060e-2034.57Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAS1.060e-2034.57Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAR1.060e-2034.57Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAN1.060e-2034.57Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAM1.060e-2034.57Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAC1.060e-2034.57Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
YKGC_ECOLI1.061e-2030.57Probable pyridine nucleotide-disulfide oxidoreduct... [more]
DLDH2_HALMA5.130e-2031.90Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marism... [more]
MERA_STAES6.287e-2034.18Mercuric reductase OS=Staphylococcus epidermidis (... [more]
MERA_STAAU6.287e-2034.18Mercuric reductase OS=Staphylococcus aureus GN=mer... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680384 ID=EY680384; Name=EY680384; organism=Citrus sinensis; type=EST; length=865bp
CATTAAGAGGGTTTGATGATGAAATGCGGGCAGTAGTTGCCAGAAATCTG
GAAGGGAGGGGAATTAATTTGCACCCGAGGACTACCATAAAGGAGTTGAT
TAAGTCAGAGGAGAGTATAAAAGTTATTACAGATCATGGTGAAGAGATTG
TTGCAGATGTTGTACTCTTTGCCACTGGCAGGGCACCTAATACAAAAAGG
TTGAATTTGAAAGCTGTTGGTGTGGAAGTTGATCAAACAGGAGCTGTGAA
GGTGGACGAGAACTCACGCACAAACGTACCTAGTATATGGGCTGTTGGTG
ATGTAACTAATCGAATGAATCTTACCCCTGTCGCCTTGATGGAGGGAACA
TGCTTTGCAAAAACTGTTTTTGGTGGACAACCCTGCAAACCAGACTACAG
GGATGTACCCTGTGCTGTATTTTGCATACCTCCTCTCTCTGTAGTGGGTC
TCAGTGAGGAGCAGGCCATAGAGCAAGGAAAGGGTGATATCCTTGTTTTC
ACATCAAGCTTCAATCCCATGAGGAACACTATCTCTGGACGGCAAGAGAA
GACAGTAATGAAGCTAGTGGTGGATGCCGAGACGGATAAAAGTTCTTGGA
GCATCAATGTGTGGGCCAGAAGCACCTGAGATATTGCAGGGTATTGCTGT
TGCACTGAAATGTGGAGCTACGAAGGCCCAATTTGACAGCACGGTGGGGA
ATCATCCTTCCTCTGCTGAAGGATTCGTGACCCTGCGGTCTGTGACGAGA
CGTGTTGCTGCCCCAAGCACCAATCCAAAAACAATTCTGGTAAGGTTCAT
CCAATATCAAAAAGGGAAGGGGGGTTGAAATTTTTTCATATGTTGGGAAA
TTTATTTGGTTTGAA
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