EY680384

Overview
NameEY680384
Unique NameEY680384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEPU (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putida GN=lpd3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.802e-17
Identity = 56/199 (28.14%), Postives = 95/199 (47.74%), Query Frame = 3
Query:    9 GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHG-----EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETDK 590
            G D E    + + L  +G+     + + +   S + + ++ +       E + AD VL A GR P TK LNL++VG+E D+ G +       T+VP +W +GDVT+   L   A  E     + +  G+P + +Y  +P  ++  P L+ VG +EEQ   +G+    V    F          + +   K++ DAETD+
Sbjct:  212 GTDTETAKTLQKALAKQGMVFKLGSKVTQATASADGVSLVLEPAAGGTAESLQADYVLVAIGRRPYTKGLNLESVGLETDKRGML-AQRTPPTSVPGVWVIGDVTSGPMLAHKAEDEAVACIERI-AGKPHEVNYNLIPGVIYTRPELATVGKTEEQLKAEGRA-YKVGKFPFTANSRAKINHETEGFAKVIADAETDE 407          

HSP 2 Score: 27.7202 bits (60), Expect = 2.802e-17
Identity = 13/44 (29.55%), Postives = 22/44 (50.00%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAE 720
            +VLG  + GP   E++    VA++  A+      T   HP+ +E
Sbjct:  407 EVLGVHLVGPSVSEMIGEFCVAMEFSASAEDIALTCHPHPTRSE 450          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 3.636e-17
Identity = 59/199 (29.65%), Postives = 101/199 (50.75%), Query Frame = 3
Query:   15 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEE-----IVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKT--VMKLVVDAETDK 590
            D E+R    R+LE + +    +T +  +  S + +K+  +  E      + ADVVL + GR P T  L+L+ +GVE D+ G + V++   +NVP ++A+GDV     L   A  +G    + +  G+    DY  VP  V+  P ++ VG +EEQ  ++G   +      F  M N+ +   +    ++K++ D ETDK
Sbjct:  254 DGEIRKQFQRSLEKQKMKFMLKTKVVSVDSSSDGVKLTVEPAEGGEQSILEADVVLVSAGRTPFTSGLDLEKIGVETDKAGRILVNDRFLSNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFI-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQLKKEG---VSYRVGKFPFMANSRAKAIDNAEGLVKILADKETDK 448          

HSP 2 Score: 25.0238 bits (53), Expect = 3.636e-17
Identity = 11/44 (25.00%), Postives = 20/44 (45.45%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAE 720
            K+LG  +  P A E++    +A+   A+          HP+ +E
Sbjct:  448 KILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSE 491          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_PSEFL (Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens GN=lpd PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 4.733e-17
Identity = 50/181 (27.62%), Postives = 91/181 (50.28%), Query Frame = 3
Query:   51 EGRGINLHPRTTIKELIKSEESIKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETDK 590
            +G  I L  R T  E+ K + ++     +GE+    D ++ A GR P T  L     GV +D+ G + VD++ +T+VP ++A+GDV     L   A  EG   A+ +  G   + +Y  +P  ++  P ++ VG +E+    +G  ++ V T  F      ++      ++K++ DA+TD+
Sbjct:  235 QGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERI-AGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGV-EVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDR 413          

HSP 2 Score: 31.5722 bits (70), Expect = 4.733e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAE 720
            +VLG  + GP A E++Q  A+ ++ G +       V +HP+ +E
Sbjct:  413 RVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSE 456          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEAE (Dihydrolipoamide dehydrogenase OS=Pseudomonas aeruginosa GN=lpdG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.733e-17
Identity = 50/181 (27.62%), Postives = 91/181 (50.28%), Query Frame = 3
Query:   51 EGRGINLHPRTTIKELIKSEESIKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAETDK 590
            +G  I L  R T  E+ K + ++     +GE+    D ++ A GR P T  L     GV +D+ G + VD++ +T+VP ++A+GDV     L   A  EG   A+ +  G   + +Y  +P  ++  P ++ VG +E+    +G  ++ V T  F      ++      ++K++ DA+TD+
Sbjct:  235 QGLNIRLGARVTASEVKKKQVTVTFTDANGEQKETFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERI-AGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGV-EVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDR 413          

HSP 2 Score: 31.5722 bits (70), Expect = 4.733e-17
Identity = 14/44 (31.82%), Postives = 25/44 (56.82%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAE 720
            +VLG  + GP A E++Q  A+ ++ G +       V +HP+ +E
Sbjct:  413 RVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSE 456          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.143e-17
Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 3
Query:    9 GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE-----SIKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            G D E+     R L+ +G      T +    K  +     SI+  +    E++  DV+L   GR P TK L L+ +G+E+D  G + V+   +T +P+I+A+GDV     L   A  EG    + + GG     DY  VP  ++  P ++ VG SEEQ  E+G
Sbjct:  252 GIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEG 413          

HSP 2 Score: 32.7278 bits (73), Expect = 6.143e-17
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGF 726
            +VLGA + GP A E++   A+AL+ GA+          HP+ +E F
Sbjct:  449 RVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 494          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 6.143e-17
Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 3
Query:    9 GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEE-----SIKVITDHGEEIVA-DVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            G D E+     R L+ +G      T +    K  +     SI+  +    E++  DV+L   GR P TK L L+ +G+E+D  G + V+   +T +P+I+A+GDV     L   A  EG    + + GG     DY  VP  ++  P ++ VG SEEQ  E+G
Sbjct:  252 GIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEG 413          

HSP 2 Score: 32.7278 bits (73), Expect = 6.143e-17
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGF 726
            +VLGA + GP A E++   A+AL+ GA+          HP+ +E F
Sbjct:  449 RVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 494          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.038e-16
Identity = 53/163 (32.52%), Postives = 79/163 (48.47%), Query Frame = 3
Query:    9 GFDDEMRAVVARNLEGRGINLHPRTTIKELIK-SEESIKVITD-----HGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            G D E+     R L+ +G      T +    K S+  I V  +       E I  DV+L   GR P T+ L L+ +G+E+D  G + V+   +T +P+I+A+GDV     L   A  EG    + + GG     DY  VP  ++  P ++ VG SEEQ  E+G
Sbjct:  252 GIDMEISKNFQRILQRQGFKFKLNTKVTGATKKSDGKIDVSVEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPKGRIPVNNRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEG 413          

HSP 2 Score: 32.7278 bits (73), Expect = 1.038e-16
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGF 726
            +VLGA + GP A E++   A+AL+ GA+          HP+ +E F
Sbjct:  449 RVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 494          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_CANFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Canis familiaris GN=DLD PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.038e-16
Identity = 51/163 (31.29%), Postives = 78/163 (47.85%), Query Frame = 3
Query:    9 GFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHG------EEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            G D E+     R L+ +G      T +    K  +    ++  G      E I  DV+L   GR P T+ L L+ +G+E+D  G + V+   +T +P+I+A+GDV     L   A  EG    + + GG     DY  VP  ++  P ++ VG SEEQ  E+G
Sbjct:  252 GIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEGASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVPIDYNCVPSVIYTHPEVAWVGKSEEQLKEEG 413          

HSP 2 Score: 32.7278 bits (73), Expect = 1.038e-16
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGF 726
            +VLGA + GP A E++   A+AL+ GA+          HP+ +E F
Sbjct:  449 RVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAF 494          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.038e-16
Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 3
Query:    9 GFDDEMRAVVARNLEGRGINLHPRT-TIKELIKSEESIKVITD-----HGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQG 479
            G D E+     R L+ +G      T  I    KS+ +I V  +       E I  DV+L   GR P T+ L L+ +G+E+D  G + V+   +T +P+I+A+GDV     L   A  EG    + + GG     DY  VP  ++  P ++ VG SEEQ  E+G
Sbjct:  252 GIDMEVSKNFQRILQKQGFKFKLNTKVIGATKKSDGNIDVSIEAASGGKAEVITCDVLLVCIGRRPFTQNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG-AVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEG 413          

HSP 2 Score: 33.113 bits (74), Expect = 1.038e-16
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  589 KVLGASMCGPEAPEILQGIAVALKCGATKAQFDSTVGNHPSSAEGF 726
            +VLGA + GP A E++   A+AL+ GA+          HP+ +E F
Sbjct:  449 RVLGAHIIGPGAGEMINEAALALEYGASCEDIARVCHAHPTLSEAF 494          
BLAST of EY680384 vs. ExPASy Swiss-Prot
Match: STHA_VIBF1 (Soluble pyridine nucleotide transhydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sthA PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.110e-16
Identity = 56/190 (29.47%), Postives = 96/190 (50.53%), Query Frame = 3
Query:   15 DDEMRAVVARNLEGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVGVEVDQTGAVKVDENSRTNVPSIWAVGDVTNRMNLTPVALMEGTCFAKTVFGGQPCKPDYRDVPCAVFCIPPLSVVGLSEEQAIEQGKGDILVFTSSFNPMRNTISGRQEKTVMKLVVDAET 584
            D+EM   ++ +    GI        + +  +++ + +  + G+++ AD +LFA GR  NT +LNL AVG+E D  G +KV++N +T+V  I+AVGDV    +L   A  +G   A+ +  G+        +P  ++ IP +S VG   EQ +   K    V  SSF  +       ++   +K++   ET
Sbjct:  221 DNEMSDALSYHFWNSGIVTRNDENFEHIEANDDGVIMHLESGKKMKADCILFANGRTGNTDKLNLSAVGLEADSRGQLKVNDNYQTDVEHIYAVGDVIGYPSLASAAYDQGRFTAQAITKGKAEARLIDHIPTGIYTIPEISSVG-KTEQELTAAKVPYEVGRSSFKHLARAQIAGKDIGSLKILFHRET 409          
The following BLAST results are available for this feature:
BLAST of EY680384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
DLDH3_PSEPU2.802e-1728.14Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putid... [more]
DLDH1_ARATH3.636e-1729.65Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH_PSEFL4.733e-1727.62Dihydrolipoyl dehydrogenase OS=Pseudomonas fluores... [more]
DLDH2_PSEAE4.733e-1727.62Dihydrolipoamide dehydrogenase OS=Pseudomonas aeru... [more]
DLDH_MACFA6.143e-1731.90Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_HUMAN6.143e-1731.90Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]
DLDH_MOUSE1.038e-1632.52Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]
DLDH_CANFA1.038e-1631.29Dihydrolipoyl dehydrogenase, mitochondrial OS=Cani... [more]
DLDH_PIG1.038e-1633.13Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
STHA_VIBF11.110e-1629.47Soluble pyridine nucleotide transhydrogenase OS=Vi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680384 ID=EY680384; Name=EY680384; organism=Citrus sinensis; type=EST; length=865bp
CATTAAGAGGGTTTGATGATGAAATGCGGGCAGTAGTTGCCAGAAATCTG
GAAGGGAGGGGAATTAATTTGCACCCGAGGACTACCATAAAGGAGTTGAT
TAAGTCAGAGGAGAGTATAAAAGTTATTACAGATCATGGTGAAGAGATTG
TTGCAGATGTTGTACTCTTTGCCACTGGCAGGGCACCTAATACAAAAAGG
TTGAATTTGAAAGCTGTTGGTGTGGAAGTTGATCAAACAGGAGCTGTGAA
GGTGGACGAGAACTCACGCACAAACGTACCTAGTATATGGGCTGTTGGTG
ATGTAACTAATCGAATGAATCTTACCCCTGTCGCCTTGATGGAGGGAACA
TGCTTTGCAAAAACTGTTTTTGGTGGACAACCCTGCAAACCAGACTACAG
GGATGTACCCTGTGCTGTATTTTGCATACCTCCTCTCTCTGTAGTGGGTC
TCAGTGAGGAGCAGGCCATAGAGCAAGGAAAGGGTGATATCCTTGTTTTC
ACATCAAGCTTCAATCCCATGAGGAACACTATCTCTGGACGGCAAGAGAA
GACAGTAATGAAGCTAGTGGTGGATGCCGAGACGGATAAAAGTTCTTGGA
GCATCAATGTGTGGGCCAGAAGCACCTGAGATATTGCAGGGTATTGCTGT
TGCACTGAAATGTGGAGCTACGAAGGCCCAATTTGACAGCACGGTGGGGA
ATCATCCTTCCTCTGCTGAAGGATTCGTGACCCTGCGGTCTGTGACGAGA
CGTGTTGCTGCCCCAAGCACCAATCCAAAAACAATTCTGGTAAGGTTCAT
CCAATATCAAAAAGGGAAGGGGGGTTGAAATTTTTTCATATGTTGGGAAA
TTTATTTGGTTTGAA
back to top