EY680373

Overview
NameEY680373
Unique NameEY680373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGAP8_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 8 OS=Homo sapiens GN=AGAP8 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.883e-19
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  235 LDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWE----AELPPN--YDRVGIENFIRAKYEEKRWI 549
            L  +  +  N  C DC+ + P+WAS+NLG+ +C++CSGIH SLG  +S+VRS  LD W  E   V+ S+GN+ +NS WE     +  P+    R   E +IR+KYEEK ++
Sbjct:  444 LQSIQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHHSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLANSIWEGSSQGQTKPSEKSTREEKERWIRSKYEEKLFL 554          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGAP2_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.883e-19
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  262 NRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWEAE----LPPNYD--RVGIENFIRAKYEEKRWIPRGGNTKSP 576
            N  C DC A  P WAS+NLG  IC++CSGIHR+LG H+S+VRS  LD W  E   V+ ++GN+ +N  WE++      P+ D  R   E++IRAKYE+  ++     ++ P
Sbjct:  943 NSICVDCGAPNPTWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPRELTLVLTAIGNDTANRVWESDTRGRAKPSRDSSREERESWIRAKYEQLLFLAPLSTSEEP 1053          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGAP5_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 5 OS=Homo sapiens GN=AGAP5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.155e-19
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  235 LDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWE----AELPPNY--DRVGIENFIRAKYEEKRWI 549
            L  +  +  N  C D + + P+WAS+NLG+ +C++CSGIHRSLG  +S+VRS  LD W  E   V+ S+GN+ +NS WE     +  P+    R   E +IR+KYEEK ++
Sbjct:  444 LQSIQNMRGNAHCVDYETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLANSIWEGSSQGQTKPSVKSTREEKERWIRSKYEEKLFL 554          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: CTLFB_HUMAN (Putative centaurin-gamma-like family member 11P OS=Homo sapiens GN=CTGLF11P PE=5 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.344e-19
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  235 LDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWE----AELPPNY--DRVGIENFIRAKYEEKRWI 549
            L  +  +  N  C DC+ + P+WAS+NLG+ +C++CSGIH SLG  +S+VRS  LD W  E   V+ S+GN+ +NS WE     +  P+    R   E +IR+KYE+K ++
Sbjct:  452 LQSIQNMRGNAHCVDCETQNPKWASLNLGVLMCIECSGIHCSLGTRLSRVRSLELDDWPVELRKVMSSIGNDLANSIWEGSSQGQTKPSVKSTREEKERWIRSKYEKKLFL 562          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: YC8E_SCHPO (Uncharacterized protein C622.14 OS=Schizosaccharomyces pombe GN=SPCC622.14 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.594e-18
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  235 LDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWEAELPPNYDRVGIENFIRAKY 531
            LD L +LPEN++C DC A  P+WAS NLGIFIC+ CSG HR LGV  S VRS T+D W   QV +++  GN  + ++   +  P +   G    IR KY
Sbjct:    5 LDQLTRLPENKKCFDCDAPNPQWASCNLGIFICLDCSGQHRGLGVEKSFVRSITMDNWSERQVKMMEVGGNSNAKTFLSTD--PMFSAAG---SIREKY 98          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGD4_ARATH (ADP-ribosylation factor GTPase-activating protein AGD4 OS=Arabidopsis thaliana GN=AGD4 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.719e-18
Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 1
Query:  253 LPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLD--TWLPEQVAVIQSMGNEKSNSYWEAEL 480
            LP N  CA+C A  P WAS+NLG+ +C+QCSG+HR+LGVHISKVRS +LD   W P  + + +++GN   NS WE  L
Sbjct:  476 LPGNNACAECNAPEPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLSLDVKVWEPTILDLFRNLGNVYCNSLWEGLL 553          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ADAP1_HUMAN (Arf-GAP with dual PH domain-containing protein 1 OS=Homo sapiens GN=ADAP1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.551e-18
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1
Query:  220 KHRKILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWEAELPPNYDR-------VGIENFIRAKYEEKRWI 549
            + R +L+ LL+ P N  CADC A  P WAS  LG+FIC+ CSGIHR++   +SKV+S  LD W   QV  + S GN+ + + +E+++P  Y R       +  E +IRAKYE + +I
Sbjct:    5 RRRAVLE-LLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFI 119          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGD6_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 1
Query:  256 PENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYW 468
            PEN+ C DC  K P+WASV+ GIF+C++CSG HR LGVHIS VRS T+D+W   Q+  +++ GNE+ N ++
Sbjct:   14 PENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQIKKMEAGGNERLNKFF 84          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGD10_ARATH (ADP-ribosylation factor GTPase-activating protein AGD10 OS=Arabidopsis thaliana GN=AGD10 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.638e-18
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 1
Query:  178 NMNEKANVSKELNAKHRKILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWE 471
            N+N+K +V K+L AK            +N+ C DC AK P WASV  GIF+C+ CS +HRSLGVHIS VRS  LD+W  EQ+ ++   GN ++  +++
Sbjct:    5 NLNDKISVFKKLKAKS-----------DNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSSEQLKMMIYGGNNRAQVFFK 91          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARAP3_MOUSE (Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 OS=Mus musculus GN=Arap3 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.057e-18
Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 1
Query:  256 PENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT--WLPEQVAVIQSMGNEKSNSYWEAELPP 486
            P NR CADC+A  P WA+VNLG+ IC QC+G HR+LG  ISKV+S  LDT  W  E V +   +GN+++N +W   LPP
Sbjct:  494 PANRHCADCRASRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQLFIVLGNDRANCFWAGALPP 572          
The following BLAST results are available for this feature:
BLAST of EY680373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
AGAP8_HUMAN1.883e-1942.34Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP2_HUMAN1.883e-1943.24Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
AGAP5_HUMAN7.155e-1942.34Arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
CTLFB_HUMAN9.344e-1941.44Putative centaurin-gamma-like family member 11P OS... [more]
YC8E_SCHPO1.594e-1847.47Uncharacterized protein C622.14 OS=Schizosaccharom... [more]
AGD4_ARATH2.719e-1853.85ADP-ribosylation factor GTPase-activating protein ... [more]
ADAP1_HUMAN3.551e-1842.74Arf-GAP with dual PH domain-containing protein 1 O... [more]
AGD6_ARATH4.638e-1853.52Probable ADP-ribosylation factor GTPase-activating... [more]
AGD10_ARATH4.638e-1844.90ADP-ribosylation factor GTPase-activating protein ... [more]
ARAP3_MOUSE6.057e-1853.16Arf-GAP with Rho-GAP domain, ANK repeat and PH dom... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-D06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680373 ID=EY680373; Name=EY680373; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGAAAAGAAACCCACTTTGAACTTTGCCATTTCCTCTTCG
TCTTCCTCTCCCCTTTCTTTGTCTGTACGGTTTCTGCTTCTATGCTGAGA
TAAAATAAGAAAGAAAGGTAGATTCTTTTCAGAGGGAAACAAAAAAAAAT
CGTTTTGCTGTGAAAGAAAAAGTTTGCAACATGAACGAGAAGGCTAACGT
TTCCAAAGAGCTTAATGCTAAGCACAGAAAGATCCTGGATGGCCTCTTAA
AACTACCTGAAAATAGGGAGTGTGCTGATTGCAAAGCCAAAGGCCCGCGA
TGGGCAAGTGTGAATTTGGGAATTTTCATATGCATGCAATGTTCTGGGAT
CCACAGAAGTCTTGGAGTGCACATTTCCAAGGTGAGATCTGCTACTTTAG
ACACATGGCTTCCAGAGCAGGTCGCAGTTATTCAATCAATGGGGAATGAG
AAATCAAATAGCTACTGGGAAGCGGAGTTGCCTCCTAATTATGATAGAGT
TGGAATCGAGAATTTCATTCGCGCAAAGTATGAAGAGAAGAGATGGATTC
CTAGGGGTGGGAATACAAAATCTCCTTCAAGGGTGAGTGAAGAAAAGGCT
TCATTTCACAGACCTCTACCCAGCAGTAGTGGGCATAGATATACAAATAA
TATAAAATCGTGTTCCTGATGTGAGGAATAATGCTCACCCACCTAATGCA
AGCAATGACATTGCTGCTCCCAAAACAAATTTCTCCACCGACTGTTAAAG
AATTTCCACAGGGTCCCCCCCAGTCAAAAAAATCAAAAAACCGGGTGCAA
AATTCAAAGCCCAACTGTCCCCAAAGTCGGAACCCACCAAAAGCAGGAAA
GTTTTTACAACACGCTTGGAAAAAAAC
back to top