EY680373

Overview
NameEY680373
Unique NameEY680373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  226 RKILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSYWEAE 477
            RK+L  +    EN  C +C A  P+W SV  GI+IC++CSG HR LGVH+S VRS T+D W   ++  +++ GN K   + EA+
Sbjct:    7 RKVLKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLEAQ 90          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG3_MOUSE (ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus GN=Arfgap3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS++ G+F+C+ CSG HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  ++S++
Sbjct:   12 IFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNSNASSFF 91          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG2_MOUSE (ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus GN=Arfgap2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS+  G+F+C+ CSG+HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  + +++
Sbjct:   13 IFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCMQVGGNANATAFF 92          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG3_RAT (ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus GN=Arfgap3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS++ G+F+C+ CSG HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  ++S++
Sbjct:   12 IFKRLRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFF 91          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG2_RAT (ADP-ribosylation factor GTPase-activating protein 2 OS=Rattus norvegicus GN=Arfgap2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  244 LLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            L  +P N+ C DC AK P WAS+  G+F+C+ CSG+HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  + +++
Sbjct:   17 LRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWSWLQLRCMQVGGNANATAFF 92          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: AGD14_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 43/141 (30.50%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  202 SKELNAKHRKILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAVIQSMGNEKSNSY----WEAE---LPPNYDRVGIENFIRAKYEEKRWIPRGGNTKSPSRVSEEKAS 603
            SK    ++ KI+ GL+KLP NR C +C + GP++       F+CM CSGIHR       +V+S ++  +  ++V V+Q+ GN+++       W+ +   LP N +   +  FI+  Y +K++     +   PS+ S++  S
Sbjct:    4 SKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREF---THRVKSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKKY-AGANDADKPSKDSQDHVS 140          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG3_PONAB (ADP-ribosylation factor GTPase-activating protein 3 OS=Pongo abelii GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS+  G+F+C+ CSG HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  ++S++
Sbjct:   12 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFF 91          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG3_MACFA (ADP-ribosylation factor GTPase-activating protein 3 OS=Macaca fascicularis GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS+  G+F+C+ CSG HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  ++S++
Sbjct:   12 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFF 91          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG3_HUMAN (ADP-ribosylation factor GTPase-activating protein 3 OS=Homo sapiens GN=ARFGAP3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS+  G+F+C+ CSG HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  ++S++
Sbjct:   12 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNASASSFF 91          
BLAST of EY680373 vs. ExPASy Swiss-Prot
Match: ARFG3_BOVIN (ADP-ribosylation factor GTPase-activating protein 3 OS=Bos taurus GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 1
Query:  232 ILDGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDT-WLPEQVAVIQSMGNEKSNSYW 468
            I   L  +P N+ C DC AK P WAS+  G+F+C+ CSG HRSLGVH+S +RS  LD+ W   Q+  +Q  GN  ++S++
Sbjct:   12 IFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFF 91          
The following BLAST results are available for this feature:
BLAST of EY680373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
ARFG1_RAT8.186e-1544.05ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_MOUSE1.069e-1446.25ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG2_MOUSE1.069e-1445.00ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_RAT1.396e-1446.25ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG2_RAT1.396e-1446.05ADP-ribosylation factor GTPase-activating protein ... [more]
AGD14_ARATH1.396e-1430.50Probable ADP-ribosylation factor GTPase-activating... [more]
ARFG3_PONAB1.824e-1446.25ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_MACFA1.824e-1446.25ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_HUMAN1.824e-1446.25ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_BOVIN1.824e-1446.25ADP-ribosylation factor GTPase-activating protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-D06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680373 ID=EY680373; Name=EY680373; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGGAAAAGAAACCCACTTTGAACTTTGCCATTTCCTCTTCG
TCTTCCTCTCCCCTTTCTTTGTCTGTACGGTTTCTGCTTCTATGCTGAGA
TAAAATAAGAAAGAAAGGTAGATTCTTTTCAGAGGGAAACAAAAAAAAAT
CGTTTTGCTGTGAAAGAAAAAGTTTGCAACATGAACGAGAAGGCTAACGT
TTCCAAAGAGCTTAATGCTAAGCACAGAAAGATCCTGGATGGCCTCTTAA
AACTACCTGAAAATAGGGAGTGTGCTGATTGCAAAGCCAAAGGCCCGCGA
TGGGCAAGTGTGAATTTGGGAATTTTCATATGCATGCAATGTTCTGGGAT
CCACAGAAGTCTTGGAGTGCACATTTCCAAGGTGAGATCTGCTACTTTAG
ACACATGGCTTCCAGAGCAGGTCGCAGTTATTCAATCAATGGGGAATGAG
AAATCAAATAGCTACTGGGAAGCGGAGTTGCCTCCTAATTATGATAGAGT
TGGAATCGAGAATTTCATTCGCGCAAAGTATGAAGAGAAGAGATGGATTC
CTAGGGGTGGGAATACAAAATCTCCTTCAAGGGTGAGTGAAGAAAAGGCT
TCATTTCACAGACCTCTACCCAGCAGTAGTGGGCATAGATATACAAATAA
TATAAAATCGTGTTCCTGATGTGAGGAATAATGCTCACCCACCTAATGCA
AGCAATGACATTGCTGCTCCCAAAACAAATTTCTCCACCGACTGTTAAAG
AATTTCCACAGGGTCCCCCCCAGTCAAAAAAATCAAAAAACCGGGTGCAA
AATTCAAAGCCCAACTGTCCCCAAAGTCGGAACCCACCAAAAGCAGGAAA
GTTTTTACAACACGCTTGGAAAAAAAC
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