EY680325

Overview
NameEY680325
Unique NameEY680325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680325 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.544e-13
Identity = 67/261 (25.67%), Postives = 121/261 (46.36%), Query Frame = 3
Query:    3 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG--------HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN----------LRQ----------NRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLCKKV 680
            +L+ T  FY  +   Y+QQ+ V +Y+K+ + +L EE +R L YL+     ++ + L+      L+      IL +   M+   + TE L  M+SL  +V N +E + + L  +I   G          I  D EK    V  LL        + +++F  +  F      A++ ++N          L+Q          ++  EL+A + D  LR    +K  + EE+E  L +VL++ +++Q KDVF  ++K  L +++
Sbjct:  206 YLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRL 462          
BLAST of EY680325 vs. ExPASy Swiss-Prot
Match: CUL5_HUMAN (Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 1.544e-13
Identity = 67/261 (25.67%), Postives = 121/261 (46.36%), Query Frame = 3
Query:    3 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG--------HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN----------LRQ----------NRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLCKKV 680
            +L+ T  FY  +   Y+QQ+ V +Y+K+ + +L EE +R L YL+     ++ + L+      L+      IL +   M+   + TE L  M+SL  +V N +E + + L  +I   G          I  D EK    V  LL        + +++F  +  F      A++ ++N          L+Q          ++  EL+A + D  LR    +K  + EE+E  L +VL++ +++Q KDVF  ++K  L +++
Sbjct:  206 YLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRL 462          
BLAST of EY680325 vs. ExPASy Swiss-Prot
Match: CDC53_YEAST (Cell division control protein 53 OS=Saccharomyces cerevisiae GN=CDC53 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.016e-13
Identity = 57/268 (21.27%), Postives = 112/268 (41.79%), Query Frame = 3
Query:    3 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDVSTRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSR-VNALESLRQALAMYIRRTG------------HGIVMDEEKD--------------KDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLINLRQ------------NRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLCKKVTVG 689
            FL+ T E+Y      Y+++  V +Y+      +  E +   +Y D  T+KPL     + L+  HI   L+  F +L+D    E +  +Y+L  R    +  +      Y+++TG            H I+ +E  +              KD +  LLE       I+ +SF  +      + +A    IN+ +            ++ +E++AK+ D  L+   K     ++    + ++ +F+++  KD FE  Y++   K++  G
Sbjct:  228 FLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTKKPLSMALNKVLITDHIEK-LENEFVVLLDARDIEKITSLYALIRRDFTLIPRMASVFENYVKKTGENEISSLLAMHKHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFSKIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKATKPEVASDMSD--EDIITIFKYLTDKDAFETHYRRLFAKRLIHG 492          
BLAST of EY680325 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 67/261 (25.67%), Postives = 121/261 (46.36%), Query Frame = 3
Query:    3 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG--------HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN----------LRQ----------NRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLCKKV 680
            +L+ T  FY  +   Y+QQ+ V +Y+K+ + +L EE +R L YL+     ++ + L+      L+      IL +   M+   + TE L  M+SL  +V N +E + + L  +I   G          I  D EK    V  LL        + +++F  +  F      A++ ++N          L+Q          ++  EL+A + D  LR    +K  + EE+E  L +VL++ +++Q KDVF  ++K  L +++
Sbjct:  206 YLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLAIYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRL 462          
BLAST of EY680325 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 66/261 (25.29%), Postives = 120/261 (45.98%), Query Frame = 3
Query:    3 FLECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDV----STRKPLIATAERQLLERHISAILDKGFTMLMDGHRTEDLQRMYSLFSRV-NALESLRQALAMYIRRTG--------HGIVMDEEKDKDMVSSLLEFKASLDTIWEQSFSKNEAFCNTIKDAFEYLIN----------LRQ----------NRPAELIAKFLDEKLRAG--NKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLCKKV 680
            +L+ T  FY  +   Y+QQ+ V +Y+K+ + +L EE +R L YL+     ++ + L+      L+      IL +   M+   + TE L  M+SL  +V   +E + + L  +I   G          I  D EK    V  LL        + +++F  +  F      A++ ++N          L+Q          ++  EL+A + D  LR    +K  + EE+E  L +VL++ +++Q KDVF  ++K  L +++
Sbjct:  206 YLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFKETILAECQGMI-KRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTDSEK---YVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRL 462          
The following BLAST results are available for this feature:
BLAST of EY680325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CUL5_MOUSE1.544e-1325.67Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3[more]
CUL5_HUMAN1.544e-1325.67Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4[more]
CDC53_YEAST2.016e-1321.27Cell division control protein 53 OS=Saccharomyces ... [more]
CUL5_PONAB3.439e-1325.67Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3[more]
CUL5_RAT7.662e-1325.29Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680325 ID=EY680325; Name=EY680325; organism=Citrus sinensis; type=EST; length=880bp
CATTTCTTGAGTGCACGTCGGAGTTTTATGCCGCCGAAGGCATGAAATAC
ATGCAGCAATCAGATGTTCCAGATTACTTGAAGCACGTGGAGATAAGGTT
GCATGAAGAACATGAAAGATGTTTACTATACCTTGATGTAAGCACAAGAA
AGCCACTTATAGCAACTGCCGAAAGGCAACTTCTTGAACGACATATATCT
GCGATTCTCGACAAGGGGTTCACAATGCTGATGGATGGCCATCGTACTGA
GGACCTACAGAGGATGTACTCACTATTTTCAAGGGTCAATGCTCTCGAAT
CATTAAGGCAGGCCCTTGCTATGTACATTCGTAGAACTGGGCATGGCATT
GTCATGGATGAAGAGAAAGATAAAGATATGGTTTCGTCTCTTTTGGAGTT
CAAGGCTTCTCTTGATACAATATGGGAACAAAGCTTCTCAAAGAATGAAG
CATTTTGCAACACAATAAAGGACGCATTTGAGTATCTAATTAATCTTCGT
CAGAACCGACCTGCTGAGCTGATTGCAAAGTTTCTGGATGAGAAGCTTCG
GGCTGGAAATAAGGGTACTTCAGAAGAGGAATTGGAGGGTACACTTGATA
AAGTTCTGGTTTTATTCAGGTTTATTCAGGGTAAAGATGTGTTTGAAGCA
TTCTATAAAAAGGATCTTTGCAAAAAGGTTACGGTTGGGGAAAGATTGCT
TCCATTGATGCAGAAGAATCTATGATTNCCAAGCTAAAGACTGGATGGGG
GAACCCAATTTACAAACAAACTTTGAAGGGAGGTTCAAGGGAATTTGAAT
TATCCAAAGGAAAAAAATGGATTCTTTCCAAAAGTTCCTCCCCCGGGCCC
GGAAAAAAAACCCCCCTCCCGGGGATTTGG
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