EY680312

Overview
NameEY680312
Unique NameEY680312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_FLAJ1 (Triosephosphate isomerase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tpiA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.402e-35
Identity = 89/247 (36.03%), Postives = 137/247 (55.47%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--NWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGGNFPKARNFFHI 803
            RK  V GNWK +  + + +++++ L                           L  +   V+AQN    +GGAFTGE+SA+ML ++ +  VILGHSERRA+ +E++  + +KV  AL   + VI C GE L+ R+SG+   +V  Q +     I+  +W  +VLAYEPVWAIGTG+ A+P QAQE+H  +R+ ++    AE+A    I++G   K    + I  +P++  +G L+GG   KA +F  I
Sbjct:    2 RKSIVAGNWKMHKNAAQTEELLNELIAKIPAKTNAQVIVAPTFVNLQAAAAKLKNTTIGVSAQNVHQAEGGAFTGEISADMLTSIGVNTVILGHSERRAIFHETDALIANKVDTALKHDMTVIFCFGEELKDRQSGNHFNIVENQLRDGVFHIAKESWSKIVLAYEPVWAIGTGETASPEQAQEMHEFIRETIRKAFGAEIADEVSILYGGSVKPENAKEIFSKPDV--DGGLIGGAALKADDFLAI 246          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PELPD (Triosephosphate isomerase OS=Pelobacter propionicus (strain DSM 2379) GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35
Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 3
Query:   84 VGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQ-TKAIAEKISN-WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKWNKLQRI-GQPNLM*NGFLVGGNFPKARNF 794
            + GNWK + T  E   +V  L                          +L  SD  +AAQ+C+  + GAFTGEVS   L +     VI+GHSERR L  E+++ V  K   A++ GL  I CVGET+E+RES +T  VV  Q T A+A  +S+ +  +V+AYEPVWAIGTGK AT  QAQEVH  +R  +  ++S  +A S RI++G   K + ++ +  QP++  +G L+GG   KA +F
Sbjct:    6 IAGNWKLHKTIAESLAMVDELKPLVAGSRGVEIVVAPVFTALKSVSFALNGSDIGLAAQDCFWEEQGAFTGEVSPAQLRDAGCSHVIIGHSERRQLFGETDEGVNRKARAAVAVGLTAIICVGETMEERESRATFTVVGRQVTAALAGFLSHEFSRIVIAYEPVWAIGTGKTATDQQAQEVHCYIRNLVTMSISQAIADSLRILYGGSVKPDNIRGLMAQPDI--DGALIGGASLKAASF 243          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_COXBU (Triosephosphate isomerase OS=Coxiella burnetii GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35
Identity = 96/252 (38.10%), Postives = 139/252 (55.16%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIA---EKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIFQ 809
            M R+  V GNWK +G+ E V +++  L                         ++L+R+     AQ+    + GA+TGEVSA ML +    +VI+GHSERR    E+N+ V  KV  AL  G++ I CVGET +QR +  T++V+ EQ   +    + +++ + +V+AYEP+WAIGTGK ATP+QA+EVHA LR  L     A +A STR+++G   K  N       PN+  +G LVGG   +A  F  I Q
Sbjct:    1 MQRRPLVAGNWKMHGSRESVGQLLRALKHGCERLETAELAVFPPFVFLQQCEEALMRTQISWGAQDVSEFERGAYTGEVSAAMLRDFHCRYVIVGHSERRQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLSVIKEQLAVVLQMNDNLASLEGMVVAYEPIWAIGTGKNATPSQAEEVHAALRDQL-HRQDATLAESTRLLYGGSVKPDNAAALFEMPNI--DGALVGGASLEAEQFLKIGQ 249          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_COXBR (Triosephosphate isomerase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35
Identity = 96/252 (38.10%), Postives = 139/252 (55.16%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIA---EKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIFQ 809
            M R+  V GNWK +G+ E V +++  L                         ++L+R+     AQ+    + GA+TGEVSA ML +    +VI+GHSERR    E+N+ V  KV  AL  G++ I CVGET +QR +  T++V+ EQ   +    + +++ + +V+AYEP+WAIGTGK ATP+QA+EVHA LR  L     A +A STR+++G   K  N       PN+  +G LVGG   +A  F  I Q
Sbjct:    1 MQRRPLVAGNWKMHGSRESVGQLLRALKHGCERLETAELAVFPPFVFLQQCEEALMRTQISWGAQDVSEFERGAYTGEVSAAMLRDFHCRYVIVGHSERRQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLSVIKEQLAVVLQMNDNLASLEGMVVAYEPIWAIGTGKNATPSQAEEVHAALRDQL-HRQDATLAESTRLLYGGSVKPDNAAALFEMPNI--DGALVGGASLEAEQFLKIGQ 249          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_COXBN (Triosephosphate isomerase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.832e-35
Identity = 96/252 (38.10%), Postives = 139/252 (55.16%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIA---EKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIFQ 809
            M R+  V GNWK +G+ E V +++  L                         ++L+R+     AQ+    + GA+TGEVSA ML +    +VI+GHSERR    E+N+ V  KV  AL  G++ I CVGET +QR +  T++V+ EQ   +    + +++ + +V+AYEP+WAIGTGK ATP+QA+EVHA LR  L     A +A STR+++G   K  N       PN+  +G LVGG   +A  F  I Q
Sbjct:    1 MQRRPLVAGNWKMHGSRESVGQLLRALKHGCERLETAELAVFPPFVFLQQCEEALMRTQISWGAQDVSEFERGAYTGEVSAAMLRDFHCRYVIVGHSERRQRHGETNEQVAAKVRAALRCGIRPIICVGETEKQRNANQTLSVIKEQLAVVLQMNDNLASLEGMVVAYEPIWAIGTGKNATPSQAEEVHAALRDQL-HRQDATLAESTRLLYGGSVKPDNAAALFEMPNI--DGALVGGASLEAEQFLKIGQ 249          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LEPIN (Triosephosphate isomerase OS=Leptospira interrogans GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.124e-35
Identity = 92/250 (36.80%), Postives = 136/250 (54.40%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNV--SAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIF 806
            RK  + GNWK N + +E   +  ++ E                         +L  S   V AQNC+     AFTGE S + L  + +  V++GHSERR  L ESN F  DK+ + L     V+ CVGETL +RESG T+ V++ Q +   + I +  + N++LAYEPVWAIGTGKVATP+QAQEVH+ +RK +      ++ ++ S  I++G   K + +Q + +   + +G LVGG   K  +F  +F
Sbjct:    2 RKTIIAGNWKMNLSLKEAVFLAHSIREKIPSISKDKVSMVFPSTLHLENVSKILEGSSVIVGAQNCYHSGLAAFTGETSPDQLKEIGVKVVMVGHSERRQFLGESNFFCNDKIRFLLKNEFTVLYCVGETLSERESGKTLEVLSSQIREGLKGIDSVFFSNLILAYEPVWAIGTGKVATPSQAQEVHSFIRKEISGLFVGASSISESISILYGGSVKPDNIQDLLKEKDI-DGGLVGGASQKISSFAELF 250          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.124e-35
Identity = 98/248 (39.52%), Postives = 126/248 (50.81%), Query Frame = 3
Query:   72 RKFFVGGNWKCN-GTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCK-WNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIFQ 809
            RK  V GNWK N G +   +     L                         K +  S   + AQNC     GA+TGEVSA ML       VI+GHSERR    E+N  V  +V  AL+ GL VI CVGETL +RESG T  +V+ Q +     +S+  NVV+AYEPVWAIGTGK AT AQA+EVH  +R  + +      A + RI +G   K  N ++    PN+  +G L+GG    A +F  I Q
Sbjct:    2 RKKIVVGNWKMNNGVAASEQLAADLLAALGSSFTGCDVGIAPTFLSLTTAGKVIAGSTIQLVAQNCHYENDGAYTGEVSAAMLKGAGCSSVIIGHSERRQFFGETNATVNLRVKKALAEGLDVILCVGETLAERESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGSVKPSNAVELFAMPNI--DGGLIGGASLNAADFVAIVQ 247          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.124e-35
Identity = 95/251 (37.85%), Postives = 140/251 (55.78%), Query Frame = 3
Query:   66 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKW-NKLQRIGQPNLM*NGFLVGGNFPKARNFFHIFQ 809
            M R   V GNWK NG     K +++ + +A                      +S +     + +QN   ++ GAFTGEVSA ML  +   +VI+GHSERRAL  E++  +  K A+A + GL  I CVGETLE+R+SG+T  +V  Q +A+ +   ++ + N ++AYEPVWAIGTGK A+P QAQ VHA LR++L  +   ++A S R+++G   K  N      Q ++  +G L+GG    A +F  I Q
Sbjct:    1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFLAKD-DPDIAQSLRLLYGGSVKADNAALLFAQSDI--DGGLIGGASLTADSFIAICQ 244          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_LEPIC (Triosephosphate isomerase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=tpiA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.329e-35
Identity = 92/250 (36.80%), Postives = 136/250 (54.40%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNV--SAEVAASTRIIHGRFCKWNKLQRIGQPNLM*NGFLVGGNFPKARNFFHIF 806
            RK  + GNWK N + +E   +  ++ E                         +L  S   V AQNC+     AFTGE S + L  + +  V++GHSERR  L ESN F  DK+ + L     V+ CVGETL +RESG T+ V++ Q +   + I +  + N++LAYEPVWAIGTGKVATP+QAQEVH+ +RK +      ++ ++ S  I++G   K + +Q + +   + +G LVGG   K  +F  +F
Sbjct:    2 RKTIIAGNWKMNLSLKEAVFLAHSIREKIPSISKDKVSMVFPSTLHLENVSKILEGSSVIVGAQNCYHSGLAAFTGETSPDQLKEIGVKVVMVGHSERRQFLGESNFFCNDKIRFLLKNEFTVLYCVGETLSERESGKTLEVLSSQIREGLKGIDSVFFSNLILAYEPVWAIGTGKVATPSQAQEVHSFIRKEISGLFVGASSISESISILYGGSVKPDNIQDLLKEKDI-DGGLVGGASQKISSFAGLF 250          
BLAST of EY680312 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.960e-35
Identity = 93/245 (37.96%), Postives = 134/245 (54.69%), Query Frame = 3
Query:   72 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKG-GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIHGRFCKW-NKLQRIGQPNLM*NGFLVGGNFPKARNF 794
            R+  V GNWK NGT   V +++ +    +                       +      V AQ+C ++ G GA TGEVSA+ LV+L   WV++GHSERR +L E+++ V  K A A + GLK + C+GETLE+RE+G T+ VVA Q   + +   +  + + V+AYEPVWAIG+G  ATP QAQEVHA +R  L  +    +A   R+++G   K  N  +     ++  +G LVGG   KA  F
Sbjct:    2 RRPMVAGNWKMNGTRASVAELIESFRR-QALPAAVEIAVFPSFVHVSQVLDVVDGVQVSVGAQDCALQSGFGALTGEVSADQLVDLGCEWVLVGHSERRLVLGETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEVVARQLGQVLDDQGVEAFQSAVIAYEPVWAIGSGLTATPEQAQEVHAAIRDQLARS-DRRIAEGVRLLYGGSVKADNAAELFAMADI--DGGLVGGASLKADEF 242          
The following BLAST results are available for this feature:
BLAST of EY680312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_FLAJ11.402e-3536.03Triosephosphate isomerase OS=Flavobacterium johnso... [more]
TPIS_PELPD1.832e-3539.58Triosephosphate isomerase OS=Pelobacter propionicu... [more]
TPIS_COXBU1.832e-3538.10Triosephosphate isomerase OS=Coxiella burnetii GN=... [more]
TPIS_COXBR1.832e-3538.10Triosephosphate isomerase OS=Coxiella burnetii (st... [more]
TPIS_COXBN1.832e-3538.10Triosephosphate isomerase OS=Coxiella burnetii (st... [more]
TPIS_LEPIN3.124e-3536.80Triosephosphate isomerase OS=Leptospira interrogan... [more]
TPIS_CHLCH3.124e-3539.52Triosephosphate isomerase OS=Chlorobium chlorochro... [more]
TPIS_ALCBS3.124e-3537.85Triosephosphate isomerase OS=Alcanivorax borkumens... [more]
TPIS_LEPIC5.329e-3536.80Triosephosphate isomerase OS=Leptospira interrogan... [more]
TPIS_PSEU56.960e-3537.96Triosephosphate isomerase OS=Pseudomonas stutzeri ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-G02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680312 ID=EY680312; Name=EY680312; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCTCGTATTTTCGTCTCGCTTTCATCGCCAAACCAAACAA
AATTCAATCGTCGTCATGGCCCGCAAATTCTTCGTCGGCGGCAACTGGAA
ATGCAATGGGACATCTGAGGAAGTGAAGAAGATTGTTTCTACATTGAATG
AAGCTGAAGTTCCTTCTGAGGATGTTGTGGAGGTTGTTGTAAGCCCTCCG
TTTGTGTTTCTTCCTTTGGTCAAGAGTCTGTTGCGGTCTGATTTCCATGT
TGCCGCTCAAAATTGCTGGGTTCGCAAAGGTGGTGCTTTTACCGGGGAAG
TTAGTGCTGAGATGCTTGTCAACTTGAGCATTCCTTGGGTCATTCTTGGT
CATTCTGAAAGAAGAGCTCTTTTGAATGAGTCAAATGATTTTGTTGGAGA
TAAAGTTGCTTATGCACTTTCTCGAGGCTTGAAAGTCATTGCTTGTGTTG
GAGAGACTCTGGAACAGCGAGAATCAGGATCTACAGTGGCTGTTGTGGCT
GAACAAACAAAAGCAATCGCAGAAAAAATATCCAACTGGGACAATGTTGT
GTTGGCTTATGAGCCAGTTTGGGCCATTGGTACCGGGAAGGTTGCAACCC
CTGCTCAGGCTCAGGAAGTCCATGCTGAACTGAGGAAATGGCTTAAAGAC
AATGTCAGTGCTGAAGTTGCAGCATCAACTAGAATCATCCACGGGAGGTT
CTGTAAATGGAACAAATTGCAAAGAATTGGGCAGCCCAACCTGATGTAAA
ATGGTTTTTTGGTTGGGGGGAACTTCCCTAAAGCCCGGAATTTCTTCCAT
ATTTTTCAAGTCGGCCCCCAATGGAAAAAAAAATTTAAATTAAAAACCAA
ACCACCCCGGGTTTGGCT
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