EY680308

Overview
NameEY680308
Unique NameEY680308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALSV (Glycine cleavage system H protein OS=Salmonella schwarzengrund (strain CVM19633) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALPK (Glycine cleavage system H protein OS=Salmonella paratyphi A (strain AKU_12601) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALPC (Glycine cleavage system H protein OS=Salmonella paratyphi C (strain RKS4594) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYTGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALPA (Glycine cleavage system H protein OS=Salmonella paratyphi A GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALNS (Glycine cleavage system H protein OS=Salmonella newport (strain SL254) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALHS (Glycine cleavage system H protein OS=Salmonella heidelberg (strain SL476) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALG2 (Glycine cleavage system H protein OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCSVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALEP (Glycine cleavage system H protein OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALDC (Glycine cleavage system H protein OS=Salmonella dublin (strain CT_02021853) GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY680308 vs. ExPASy Swiss-Prot
Match: GCSH_SALCH (Glycine cleavage system H protein OS=Salmonella choleraesuis GN=gcvH PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.491e-20
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1 
Query:   13 FVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 276
            FV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   42 FVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYTGGWIFKIKASDESELESLLDATAYEALLEDE 129
The following BLAST results are available for this feature:
BLAST of EY680308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 433
Match NameE-valueIdentityDescription
GCSH_SALSV1.491e-2052.27Glycine cleavage system H protein OS=Salmonella sc... [more]
GCSH_SALPK1.491e-2052.27Glycine cleavage system H protein OS=Salmonella pa... [more]
GCSH_SALPC1.491e-2052.27Glycine cleavage system H protein OS=Salmonella pa... [more]
GCSH_SALPA1.491e-2052.27Glycine cleavage system H protein OS=Salmonella pa... [more]
GCSH_SALNS1.491e-2052.27Glycine cleavage system H protein OS=Salmonella ne... [more]
GCSH_SALHS1.491e-2052.27Glycine cleavage system H protein OS=Salmonella he... [more]
GCSH_SALG21.491e-2052.27Glycine cleavage system H protein OS=Salmonella ga... [more]
GCSH_SALEP1.491e-2052.27Glycine cleavage system H protein OS=Salmonella en... [more]
GCSH_SALDC1.491e-2052.27Glycine cleavage system H protein OS=Salmonella du... [more]
GCSH_SALCH1.491e-2052.27Glycine cleavage system H protein OS=Salmonella ch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-F10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680308 ID=EY680308; Name=EY680308; organism=Citrus sinensis; type=EST; length=474bp
CCACGCGTCCGGTTTGTGGAGCTGCCAGAAACTGGTGCCTCAGTCAAACA
AGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAAGCAACCAGTGACGTTA
ATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAACTCCAAGCTCACCCAA
ACGCCTGGCTTGGTCAATTCAAGCCCATATGAAGAAGGATGGCTGATAAA
GGTAAAGCCTAGCAGCCCTTCGGATTTAGAATCCTTGATGGATCCACAGG
CTTACACGAAATTTTGCGAAGAAGAAAATGCAGCTCATTAGAATCTTCAC
ACTGTTTCATTTTCTTTTCCCAAAACATATTAATAAATCTCTTTGTTTTA
CTCGCTATTTGTGTTGTAATTATGCATCTTCATGTAATTAAGACCCATTT
CTCCTTTCTCTTTTACCCGTACTAACTATTTAATTTTGACTGTTTGAGGT
TCGTTCCAAAAAAAAAAAAAAAAA
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