EY680262

Overview
NameEY680262
Unique NameEY680262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length499
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.070e-30
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct:  200 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 3.070e-30
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct:  200 ADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.009e-30
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEAF ELKVKE+K GRLAM SMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPGK
Sbjct:  200 ADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.236e-30
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPV NNAWAYATNFVPGK
Sbjct:  200 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.931e-30
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct:  200 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.931e-30
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            A+DPE  AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  199 AEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.166e-29
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP  NNAWAYATNF PGK
Sbjct:  200 ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.166e-29
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK
Sbjct:  201 ADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.166e-29
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            A+ PEAFAELKVKE+KNGRLAMFSMFGFFV AIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  163 AEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228          
BLAST of EY680262 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.523e-29
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 2
Query:   11 ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 208
            ADDPEA AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT   PGK
Sbjct:  191 ADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256          
The following BLAST results are available for this feature:
BLAST of EY680262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
CB23_TOBAC3.070e-3093.94Chlorophyll a-b binding protein 36, chloroplastic ... [more]
CB21_GOSHI3.070e-3093.94Chlorophyll a-b binding protein 151, chloroplastic... [more]
CB22_MAIZE4.009e-3092.42Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB24_SOLLC5.236e-3092.42Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB26_PETSP8.931e-3092.42Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB23_APIGR8.931e-3092.42Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB23_POLMU1.166e-2990.91Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB21_PINTH1.166e-2993.94Chlorophyll a-b binding protein type I, chloroplas... [more]
CB21_PEA1.166e-2992.42Chlorophyll a-b binding protein AB96 (Fragment) OS... [more]
CB22_SOYBN1.523e-2992.42Chlorophyll a-b binding protein 2, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-B10-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680262 ID=EY680262; Name=EY680262; organism=Citrus sinensis; type=EST; length=499bp
CCACGCGTCCGCTGATGACCCGGAGGCTTTTGCTGAGCTCAAGGTTAAGG
AAATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTCGTT
CAGGCCATTGTCACCGGCAAGGGACCGTTAGAGAACTTGGCCGACCACTT
GGCCGACCCTGTCAACAACAATGCCTGGGCCTACGCCACCAACTTTGTCC
CCGGAAAGTGAGCTTCGGTTGATAACATTAGTAGCGTGGAAATTGGAATT
GAGAGTGATTGGTTATTGATGTGACTCTATTTCAACTTGCAAAACATGTG
AATTATGTAATGTACTGCTACTACCAGTTTGAGGGGATTGTATTTTCATT
CAATCTCTTGTCGCACGGTTCTAGTTCTAGTTCCTCCTCCTTACAGGTTG
TGCCAGAATCTAGTTACAAGTTTACATCACAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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