EY680258

Overview
NameEY680258
Unique NameEY680258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: SNU13_YEAST (13 kDa ribonucleoprotein-associated protein OS=Saccharomyces cerevisiae GN=SNU13 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  146 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLT 442
            P A PLA   L+++ L +V++AA  + LK+G  E  K++ RG     ++A +  PI+++ H+P+LCE+ ++PY++V S+  L  A    RP     + T
Sbjct:    6 PKAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITT 104          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: SNU13_YARLI (13 kDa ribonucleoprotein-associated protein OS=Yarrowia lipolytica GN=SNU13 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  146 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 508
            P A PLA   L+++ L +V++A   + LK+G  E  K++ RG     ++A +  PI+++ H+P+LCE+ ++PYI+V SK  L  A    RP     V +        Q  Q K K +  L+
Sbjct:    6 PKAFPLADAALTQQILDIVQQATHLRQLKKGANEATKTLNRGISEFIIMAADAEPIEILLHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQIIQMKDKIERLLI 126          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: RL7A_NANEQ (50S ribosomal protein L7Ae OS=Nanoarchaeum equitans GN=rpl7ae PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.420e-13
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 2
Query:  146 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANA 400
            P  K    ++L+ +  +LVR+A E   +++G  E  K++ RG   L +IA N++P +++ H+P LCEE  +PY+YV SKE+L  A
Sbjct:    6 PYVKFEVPEELANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKA 90          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: SNU13_DEBHA (13 kDa ribonucleoprotein-associated protein OS=Debaryomyces hansenii GN=SNU13 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  146 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 508
            P A PLA   L+++ L +V+++   + LK+G  E  K++ RG     ++A +  PI+++ H+P+LCE+ ++PY++V SK  L  A    RP     V T        Q    K K +  L+
Sbjct:    6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTNEASAMKNQIYGIKDKIETLLI 126          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: SNU13_ASHGO (13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii GN=SNU13 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.466e-13
Identity = 37/121 (30.58%), Postives = 65/121 (53.72%), Query Frame = 2
Query:  146 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 508
            P A PLA   L+++ L +V++A+  + LK+G  E  K++ RG     ++A +  PI+++ H+P+LCE+ ++PY++V S+  L  A    RP     + T        Q    K K +  L+
Sbjct:    7 PKAFPLADAALTQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETLLI 127          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: RL7A_THEON (50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl7Ae PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 38/107 (35.51%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  173 KLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG-ELGQEEQDKLK 490
            +L+++ L+ V  A +   +++G  E  K++ RG   L +IA ++ P +++ H+P LCEE +IPYIYV SK++L  A   + P   V ++ +P KG EL +E   K++
Sbjct:   14 ELAEKALEAVELARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVPAASVAII-EPGKGRELVEEIAMKVR 119          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: SNU13_CANAL (13 kDa ribonucleoprotein-associated protein OS=Candida albicans GN=SNU13 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 2
Query:  146 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 436
            P A PLA   L+++ L +V+++   + LK+G  E  K++ RG     ++A +  PI+++ H+P+LCE+ ++PY++V SK  L  A    RP     V
Sbjct:    6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASV 102          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: RL7A_SULIY (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl7Ae PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 2
Query:  134 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 439
            +S A   K    + L+ + L+ VR+A E   +K+G  E  K++ RG   L VIA ++ P +++ H+P+LC+E  IPY+YV+SK+ L  A   +  T    +L
Sbjct:    1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: RL7A_SULIN (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl7Ae PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 2
Query:  134 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 439
            +S A   K    + L+ + L+ VR+A E   +K+G  E  K++ RG   L VIA ++ P +++ H+P+LC+E  IPY+YV+SK+ L  A   +  T    +L
Sbjct:    1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102          
BLAST of EY680258 vs. ExPASy Swiss-Prot
Match: RL7A_SULIM (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl7Ae PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 2
Query:  134 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 439
            +S A   K    + L+ + L+ VR+A E   +K+G  E  K++ RG   L VIA ++ P +++ H+P+LC+E  IPY+YV+SK+ L  A   +  T    +L
Sbjct:    1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102          
The following BLAST results are available for this feature:
BLAST of EY680258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
SNU13_YEAST3.420e-1334.3413 kDa ribonucleoprotein-associated protein OS=Sac... [more]
SNU13_YARLI3.420e-1333.0613 kDa ribonucleoprotein-associated protein OS=Yar... [more]
RL7A_NANEQ3.420e-1338.8250S ribosomal protein L7Ae OS=Nanoarchaeum equitan... [more]
SNU13_DEBHA4.466e-1331.4013 kDa ribonucleoprotein-associated protein OS=Deb... [more]
SNU13_ASHGO4.466e-1330.5813 kDa ribonucleoprotein-associated protein OS=Ash... [more]
RL7A_THEON9.950e-1335.5150S ribosomal protein L7Ae OS=Thermococcus onnurin... [more]
SNU13_CANAL1.697e-1234.0213 kDa ribonucleoprotein-associated protein OS=Can... [more]
RL7A_SULIY1.697e-1235.2950S ribosomal protein L7Ae OS=Sulfolobus islandicu... [more]
RL7A_SULIN1.697e-1235.2950S ribosomal protein L7Ae OS=Sulfolobus islandicu... [more]
RL7A_SULIM1.697e-1235.2950S ribosomal protein L7Ae OS=Sulfolobus islandicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-009-B05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680258 ID=EY680258; Name=EY680258; organism=Citrus sinensis; type=EST; length=875bp
CGGACGCGTGGGTGAAAAAGAAAAACCCTAGCTCTGTTTCGTGCAATTCA
TTGAGAGAGAGAACTGAAAGAAGAAAATGGGAAGCGACAGCGAAGCAGAG
AGAACCCCACATAAAGATGAGAAGAAGAAGATTGTTAGTCTTGCTCCCAT
TGCTAAACCTCTAGCTGGCAAGAAGCTCTCCAAAAGAACCCTCAAGCTTG
TCCGTCGAGCTGCTGAACACAAATGCTTGAAGAGAGGAGTGAAGGAAGTG
GTCAAAAGTATCCGCCGTGGTCATAAAGGATTATGTGTTATAGCTGGGAA
CATTAGTCCAATTGACGTCATCACTCACGTTCCTATCTTATGTGAAGAGT
CTGATATTCCCTACATTTATGTTGCTTCAAAAGAGGATCTTGCAAATGCA
GGTGCCACAAAGAGGCCAACATGCTGTGTTTTGGTGCTAACTAAGCCAAC
TAAGGGAGAACTAGGACAAGAGGAACAAGATAAGTTGAAAGCTGATTATA
CCCTCGTTGTAGAGGATGTGAAGGAACTGGCATCCTCTCTTTTCTGATGA
ACTAGACTTAAAGCCAACAAAGATGATTGTACTTACAGATATGTTTGATT
TCGAACCTTCCCTTTCTAGCTGAGTAATGTACTCTAGTTTTGTCGAATGT
AATATGCAGTTTGTCTCTGTTGCATGAGATGGGTGGGGTGTCATGTCTCT
CATATCTGGGTATATGGCCTTTTTTTTTTTTTTTTTAAGAAGCAAACTGC
GAAATAATCTAAATTTTTAGTGCCAATCCCCTGGAAATTTTTGTTGGTAT
AATTTCTTTTATGGCCCTTATTTCCCTTTCCCAGCCAATTTTTACGGGGA
ATTAATTTCCCGGGGAAACCCGGCT
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