EY680236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 7.392e-80 Identity = 151/223 (67.71%), Postives = 176/223 (78.92%), Query Frame = 1 Query: 94 RISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 R++MR+T SKS S + WYG DR K+LGPFSGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGE+TDP+YP +G+ DDP+ F ++KE + ++A FS F + VT KG ++ DHL Sbjct: 35 RVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLA-DDPDTFA-ELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPLENL-NDHL 249
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 6.258e-79 Identity = 158/250 (63.20%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 31 SSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE D +YP +G+ DDPEAF ++KE + ++A FS F + VT KG ++ +DH+ Sbjct: 9 SAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLA-DDPEAFA-ELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPIENL-SDHI 246
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 5.297e-78 Identity = 159/250 (63.60%), Postives = 182/250 (72.80%), Query Frame = 1 Query: 28 SSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 SSS G+ + L P NEL + RI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAGAQIFSEGGLDY GNP+LIHAQSILAIWACQVVLMG +EGYR+ GG LGE DPL P +G+ DDPEA C ++KE + ++A FS F + VT KG ++ + DHL Sbjct: 9 SSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPES--IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLA-DDPEA-CAELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPIENLY-DHL 247
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.180e-77 Identity = 155/250 (62.00%), Postives = 183/250 (73.20%), Query Frame = 1 Query: 31 SSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG +EGYR+ GGPLGE D +YP +G+ DDPEAF ++KE + ++A FS F + VT KG ++ + DH+ Sbjct: 9 SAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLA-DDPEAFA-ELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPIENLF-DHV 246
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.629e-77 Identity = 155/250 (62.00%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 28 SSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YP +G+ DDP+ F ++KE + ++A FS F + VT KG ++ + DH+ Sbjct: 9 TTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA-DDPDTFA-ELKVKELKNGRLA-----MFSMFGFFVQAIVTGKGPIENLF-DHV 244
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.629e-77 Identity = 155/250 (62.00%), Postives = 185/250 (74.00%), Query Frame = 1 Query: 28 SSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YP +G+ DDP+ F ++KE + ++A FS F + VT KG ++ + DH+ Sbjct: 9 TTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA-DDPDTFA-ELKVKELKNGRLA-----MFSMFGFFVQAIVTGKGPIENLF-DHV 244
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 5.857e-77 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 1 Query: 91 GRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 GR SMR+T K+V S WYG DR K+LGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYR+ GGPLGE DPLYP +G+ DDPEAF ++KE + ++A FS F + VT KG ++ ADH+ Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA-DDPEAFA-ELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPIENL-ADHI 245
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 7.649e-77 Identity = 148/225 (65.78%), Postives = 173/225 (76.89%), Query Frame = 1 Query: 88 GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 GGR++MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YP +G+ DDPEAF ++KE + ++A FS F + VT KG ++ +DH+ Sbjct: 4 GGRVTMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLA-DDPEAFA-ELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPIENL-SDHI 218
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.305e-76 Identity = 155/250 (62.00%), Postives = 181/250 (72.40%), Query Frame = 1 Query: 31 SSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYR+ GGPLGE D +YP +G+ DDPEAF ++KE + ++A FS F + VT KG ++ + DH+ Sbjct: 9 SAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQS--IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLA-DDPEAFA-ELKVKEIKNGRLA-----MFSMFGFFVQAIVTGKGPIENLY-DHV 246
BLAST of EY680236 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 3.214e-75 Identity = 145/195 (74.36%), Postives = 160/195 (82.05%), Query Frame = 1 Query: 178 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEMTDPLYPRWQL*SIGVGLDDPEAFC*NSRLKENQEWKVAYVLHVWFSSF----KGFVTRKGTVKKTWADHL 750 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDP+YP +G+ DDPEAF ++KE + ++A FS F + VT KG ++ ADHL Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA-DDPEAFA-ELKVKELKNGRLA-----MFSMFGFFVQAIVTGKGPLENL-ADHL 187 The following BLAST results are available for this feature:
BLAST of EY680236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680236 ID=EY680236; Name=EY680236; organism=Citrus sinensis; type=EST; length=885bpback to top |