EY680202

Overview
NameEY680202
Unique NameEY680202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_AERHH (N-acetyl-gamma-glutamyl-phosphate reductase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=argC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.374e-12
Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V F PHL   +RG+ +TIYV++A GVT   + Q    +YE +  V+L   G +P    V G+ YC  ++   +     +++  IDNL+KGA+ QA+Q +NI  GF   TGL+
Sbjct:  228 VLFQPHLGNYVRGILATIYVQLADGVTPTQVDQAYLKAYEGKPLVRLT--GQMPSIRGVAGTPYC--DLAWQQQGNMLVVVCAIDNLLKGAASQAMQCINIKFGFEPATGLI 335          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_PYRCJ (N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=argC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQST--IYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGV----VPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            L+ +A  +V V+FTPH + ++RG+ +T  ++VE  P  T  DL +  +  +   +F+++++  +     P    V GSN   +    D    R +  + IDNLV+GA+GQA+Q  NI +GFPE+ GL
Sbjct:  219 LSRLAGKEVKVAFTPHAVDIVRGIFTTGHVFVEKMP--TEADLWKYYRALFGDSKFIRIVKDRLGISRYPNVKYVLGSNLVDLGFELDARMKRVVTFAAIDNLVRGAAGQAVQAFNIAMGFPEDEGL 343          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_PYRAB (N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase OS=Pyrococcus abyssi GN=argC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLL-EKGVVPRTHN---VRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLY 383
            V   FT H + ++RG+ +T Y +       +DL ++L + Y  E F++L+ +KG + R  +   V GSN+  +    D    RAI+ S +DNL+KG +GQA+QN+NIM GF E  GL Y
Sbjct:  209 VKAMFTVHSVDIVRGLLATTYFKFEGSE--KDLLKRL-LMYRGEPFIRLVTDKGGLQRYPDPKYVIGSNFVDIGFSYDSENSRAIVFSALDNLIKGGAGQAVQNMNIMFGFDETLGLNY 324          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_THENV (N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=argC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 42/127 (33.07%), Postives = 72/127 (56.69%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQST--IYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGV----VPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            L+ +A  +V V+FTPH + ++RG+ +T  +Y++  P     D+ +  +  Y   +F+++++  +     P    V GSN   +    D    R +  + IDNLV+GASGQA+Q  N+ +GFPE+ GL
Sbjct:  220 LSRLAGRRVRVAFTPHAVDIVRGIFTTGHVYLDKLPAEA--DMWKYYRSMYGDSKFIRIVKDRLGISRYPNVKYVLGSNVVDVGFELDPRLNRVVTFAAIDNLVRGASGQAVQAFNVAMGFPEDEGL 344          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_PYRHO (N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase OS=Pyrococcus horikoshii GN=argC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLL-EKGVVPRTHN---VRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLY 383
            V   FT H + ++RG+ +TIY         +DL +++ I Y+ E F++L+ +KG + R  +   V GSN+  + +  D    R I+ S +DNL+KG +GQA+QN+NIM G  E  GL Y
Sbjct:  209 VRAMFTVHSVDIVRGLLATIYFTFEGNE--KDLLKRMLI-YKDEPFIRLVVDKGGLQRYPDPKYVLGSNFVDLGLAYDEENSRVIVFSALDNLIKGGAGQAVQNMNIMFGLDETLGLGY 324          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_PYRFU (N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-phosphate reductase OS=Pyrococcus furiosus GN=argC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   33 SKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLL-EKGVVPRTHN---VRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLY 383
            ++V   FT H + ++RG+ +TIY          +L ++L + Y+ E FV+++ +KG + R  +   V GSN+  +    D    R ++ S IDNL+KG +GQA+QN+NIM G  E TGL Y
Sbjct:  207 TRVKAMFTVHSVDLVRGLLATIYFRYEGNE--RELLRKL-LMYKDEPFVRIVTDKGGLQRYPDPKYVIGSNFIDIGFAYDSENSRVMVFSAIDNLIKGGAGQAVQNMNIMFGLKETTGLEY 324          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_ECO57 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Escherichia coli O157:H7 GN=argC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPG-RAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V FTPHL    RG+  TI   + PGVT   + Q L+ +Y H+  V+L +KG VP   NV G  +C +      + G   II++  DNL+KGA+ QA+Q  NI  G+ E   L+
Sbjct:  226 VIFTPHLGNFPRGILETITCRLKPGVTQAQVAQALQQAYAHKPLVRLYDKG-VPALKNVVGLPFCDIGF---AVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI 334          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_CORK4 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=argC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.220e-12
Identity = 45/134 (33.58%), Postives = 66/134 (49.25%), Query Frame = 3
Query:    6 VRGLTDVASSKVTVSFTPHLMPMIRGMQSTI----------YVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            ++ L +     V VSFTP L PM RG+ +T             E  P    + +    +  Y  E+FV +L     P T +V GSN   +    D    R ++ S IDNLVKG +G A+Q +N+  G+PE++GL
Sbjct:  217 IQNLQEACDEPVQVSFTPVLAPMQRGILTTASAPASDELVALTEKDPSAAQDAVKAAYRSFYSDEKFVVVLNGDQQPATQSVLGSNAVHIQAEYDVAARRVVVTSAIDNLVKGTAGAAIQCMNLAQGWPEDSGL 350          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_VIBF1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=argC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.818e-12
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGR-AIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V FTPHL    RG+ +TI  ++A GVT +++ +  + +Y     V+LLE  + P+  +V  + +C +     ++ G   I++S IDNL+KGAS QA+Q +NI  GFP  T L+
Sbjct:  226 VIFTPHLGNFKRGILATITTKLAKGVTEKEIQEAFETAYTQTPAVRLLENEM-PKIQSVEKTPFCDIGW---KVQGEHLIVVSAIDNLLKGASSQAMQCINIRFGFPVLTALI 334          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_VIBVU (N-acetyl-gamma-glutamyl-phosphate reductase OS=Vibrio vulnificus GN=argC PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKG-VVPRTHNVRGSNYCLMNVFPDRIPGRAII-ISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V FTPHL    RG+ +TI +++  GVT E +      +Y+ +  V+L  KG V+PR  +V  + +C +     R+ G+ II IS IDNL+KGAS QA+Q LNI  GF   T LL
Sbjct:  226 VIFTPHLGNFKRGILATITMKLQDGVTKEQVAHAFAQAYDRKPAVRL--KGDVIPRIQDVEFTPFCDLGW---RVQGQHIIVISAIDNLLKGASSQAMQCLNIHYGFSPLTALL 334          
The following BLAST results are available for this feature:
BLAST of EY680202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ARGC_AERHH1.374e-1238.39N-acetyl-gamma-glutamyl-phosphate reductase OS=Aer... [more]
ARGC_PYRCJ2.343e-1234.65N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-a... [more]
ARGC_PYRAB2.343e-1238.66N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-a... [more]
ARGC_THENV3.997e-1233.07N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-a... [more]
ARGC_PYRHO3.997e-1237.82N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-a... [more]
ARGC_PYRFU3.997e-1237.19N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-a... [more]
ARGC_ECO573.997e-1239.82N-acetyl-gamma-glutamyl-phosphate reductase OS=Esc... [more]
ARGC_CORK45.220e-1233.58N-acetyl-gamma-glutamyl-phosphate reductase OS=Cor... [more]
ARGC_VIBF16.818e-1238.05N-acetyl-gamma-glutamyl-phosphate reductase OS=Vib... [more]
ARGC_VIBVU8.904e-1242.98N-acetyl-gamma-glutamyl-phosphate reductase OS=Vib... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680202 ID=EY680202; Name=EY680202; organism=Citrus sinensis; type=EST; length=905bp
CCCGCGTCCGGGGACTGACTGATGTTGCAAGTTCAAAAGTAACAGTCAGT
TTCACTCCACACCTAATGCCAATGATCCGAGGCATGCAATCAACTATATA
CGTTGAAATGGCTCCAGGAGTGACAATCGAGGATTTATGCCAGCAATTAA
AAATCTCCTATGAGCATGAGGAATTTGTGAAGTTGTTGGAAAAGGGAGTT
GTCCCTCGGACTCACAATGTTCGAGGTTCTAATTACTGTTTGATGAATGT
CTTTCCTGATCGAATTCCTGGAAGAGCAATAATTATATCAGTTATTGATA
ATCTTGTGAAGGGAGCATCAGGTCAAGCTCTTCAAAATCTTAACATAATG
CTGGGATTTCCGGAAAATACTGGGCTTCTATATCAGCCCTTGTTTCCTTA
GTTTCTTTTCTTAATATGTTTAAAGAGTAAGCAGGCATTTTCAACACTAA
TTAACAAATCTCTCTTAGCCTACCCAAAACTCTCTTGAAAATTAGTATAT
TTCGTCTATCGACTATGGAGGCTGTTCAGGAACAGTTCAGGTTACTTTGG
GGGAATTTTGTTTTCAAAGCTCCGACACCCTTTTGAAGAGTTCCTCCATT
TCGTCGAATTGTCAGAAAAGAGTGGTGCTAGAAGCATGTAGAATAGTATA
ACAGGAGTCCATGTGTGTAATAATGAAAATTCACTTTACAGGGTTGAGGG
ATTTTTGAAAAATTGGTTTAAATTTTTGGGCTTGCAAGGGTGGGAACCAC
CTCCATACACCAAATAAAAAGTGCTTTTTAATTCAAAAAAAAAAAAAAAA
GGGGGGCCCGCTCCTAAAGGATACCAGCTTAAGTACCCGGGGGATGGCAA
AAGCCCTAACCCCTTCTAAAAGGGGCCCCCAAAATTTTAATATTCCCGGG
GGCCG
back to top