EY680202

Overview
NameEY680202
Unique NameEY680202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_HALWD (N-acetyl-gamma-glutamyl-phosphate reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=argC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGV----VPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            ++VSFT H + M RG  +T +V  +  V+  DL       Y  E F++ +  G      P   +V GSNY  +    D    R +I S IDN++KG++GQA+   NI LG  E TGL
Sbjct:  219 LSVSFTAHAVEMTRGASATCHVFPSEPVSNSDLWGAYHDVYAEEPFMRTVAGGGGVYRYPEPKSVAGSNYAEVGFERDPENHRLVIFSAIDNMMKGSAGQAVHAANIALGIDETTGL 335          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_HALMA (N-acetyl-gamma-glutamyl-phosphate reductase OS=Haloarcula marismortui GN=argC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGV----VPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 386
            + VSFT H + MIRG  +T +V     V+  DL    +  YE E FV+L+  G      P   +V G+N   +    D    R ++ S IDN++KG++GQA+   N+ LG  E  GL +Q
Sbjct:  218 IDVSFTVHAVDMIRGASATCHVFPEQRVSKGDLWGAYRGEYEDEPFVELVAGGGGVYRYPEPKSVAGTNRAEVGFELDPGNKRLVVFSAIDNMMKGSAGQAVHAANVALGIEETAGLEFQ 337          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_ECOLI (N-acetyl-gamma-glutamyl-phosphate reductase OS=Escherichia coli (strain K12) GN=argC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPG-RAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V FTPHL    RG+  TI   +  GVT   + Q L+ +Y H+  V+L +KG VP   NV G  +C +      + G   II++  DNL+KGA+ QA+Q  NI  G+ E   L+
Sbjct:  226 VIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG-VPALKNVVGLPFCDIGF---AVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI 334          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_CAMHC (N-acetyl-gamma-glutamyl-phosphate reductase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=argC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +A S++   F P+L+ + RGM  +++  +   +  + +   LK  Y+ EEF++  ++ V  +  NV G+++C  ++F      +  I S IDNL+KGAS QA+ N N+ML  PEN+ L
Sbjct:  218 LAGSEIDTIFVPNLVSITRGMSVSVFAVLKEKIDADKI---LKEFYKDEEFIRFRDEPV--QIKNVVGTHFC--DIFVRTACNKIFINSAIDNLLKGASSQAVANANLMLDEPENSAL 328          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_YERPE (N-acetyl-gamma-glutamyl-phosphate reductase OS=Yersinia pestis GN=argC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGR-AIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V FTPHL    RG+ +TI   +  GVT +++      +Y+++  V+L ++GV P    V G  +C +      + G   II++  DNL+KGA+ QA+Q +NI  GFPE   LL
Sbjct:  226 VIFTPHLGNFARGILATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGV-PALKAVVGLPFCDIGF---SVQGEHLIIVATEDNLLKGAAAQAVQCMNIRFGFPETQSLL 334          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_MORPR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Moritella profunda GN=argC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            V FTPHL    RG+ +TI V++A GVT E +    + +Y+ +  V+LL  G  P    V  + YC  ++   +     I++S IDNL+KGA+ QA+Q +NI  GF   T L+
Sbjct:  228 VIFTPHLGSFKRGILATINVKLAAGVTPEQVTAAYQEAYQDQPMVRLLPSG-WPSIKAVEKTAYC--DLAWQQQGQDLIVVSAIDNLLKGAAAQAMQCINIRFGFAMTTSLV 336          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_SULMW (N-acetyl-gamma-glutamyl-phosphate reductase OS=Sulcia muelleri (strain GWSS) GN=argC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            + F P+     RG+ ST+Y  +   ++ E++       Y+++ F+ L EK +      V  +N C++N+    I  + II S+IDNL+KGASGQA+QN+NIM  F E  GL
Sbjct:  214 IYFIPYRGGFSRGIISTLYTRI--DLSFEEIKNIYDKFYKNDPFIFLSEKEI--HLKQVINTNKCILNL--KYIKNKLIITSIIDNLIKGASGQAVQNMNIMYNFEETCGL 318          
The following BLAST results are available for this feature:
BLAST of EY680202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ARGC_HALWD4.419e-1136.75N-acetyl-gamma-glutamyl-phosphate reductase OS=Hal... [more]
ARGC_HALMA4.419e-1135.83N-acetyl-gamma-glutamyl-phosphate reductase OS=Hal... [more]
ARGC_ECOLI4.419e-1138.94N-acetyl-gamma-glutamyl-phosphate reductase OS=Esc... [more]
ARGC_CAMHC4.419e-1133.90N-acetyl-gamma-glutamyl-phosphate reductase OS=Cam... [more]
ARGC_YERPE5.772e-1137.17N-acetyl-gamma-glutamyl-phosphate reductase OS=Yer... [more]
ARGC_MORPR5.772e-1138.39N-acetyl-gamma-glutamyl-phosphate reductase OS=Mor... [more]
ARGC_SULMW9.845e-1136.94N-acetyl-gamma-glutamyl-phosphate reductase OS=Sul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680202 ID=EY680202; Name=EY680202; organism=Citrus sinensis; type=EST; length=905bp
CCCGCGTCCGGGGACTGACTGATGTTGCAAGTTCAAAAGTAACAGTCAGT
TTCACTCCACACCTAATGCCAATGATCCGAGGCATGCAATCAACTATATA
CGTTGAAATGGCTCCAGGAGTGACAATCGAGGATTTATGCCAGCAATTAA
AAATCTCCTATGAGCATGAGGAATTTGTGAAGTTGTTGGAAAAGGGAGTT
GTCCCTCGGACTCACAATGTTCGAGGTTCTAATTACTGTTTGATGAATGT
CTTTCCTGATCGAATTCCTGGAAGAGCAATAATTATATCAGTTATTGATA
ATCTTGTGAAGGGAGCATCAGGTCAAGCTCTTCAAAATCTTAACATAATG
CTGGGATTTCCGGAAAATACTGGGCTTCTATATCAGCCCTTGTTTCCTTA
GTTTCTTTTCTTAATATGTTTAAAGAGTAAGCAGGCATTTTCAACACTAA
TTAACAAATCTCTCTTAGCCTACCCAAAACTCTCTTGAAAATTAGTATAT
TTCGTCTATCGACTATGGAGGCTGTTCAGGAACAGTTCAGGTTACTTTGG
GGGAATTTTGTTTTCAAAGCTCCGACACCCTTTTGAAGAGTTCCTCCATT
TCGTCGAATTGTCAGAAAAGAGTGGTGCTAGAAGCATGTAGAATAGTATA
ACAGGAGTCCATGTGTGTAATAATGAAAATTCACTTTACAGGGTTGAGGG
ATTTTTGAAAAATTGGTTTAAATTTTTGGGCTTGCAAGGGTGGGAACCAC
CTCCATACACCAAATAAAAAGTGCTTTTTAATTCAAAAAAAAAAAAAAAA
GGGGGGCCCGCTCCTAAAGGATACCAGCTTAAGTACCCGGGGGATGGCAA
AAGCCCTAACCCCTTCTAAAAGGGGCCCCCAAAATTTTAATATTCCCGGG
GGCCG
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