EY680202

Overview
NameEY680202
Unique NameEY680202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_RHOS1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=argC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +A   V V FTPHL PM RG+ + +YV+  P      L ++    Y  E F+++L  G +P T ++RGSNY  + V  DR+PG A++++V+DNL KG+SGQA+QN N+MLG  E  GL
Sbjct:  222 IAGRPVQVRFTPHLTPMNRGILANVYVKGDPQAVHRALAER----YLTETFLEVLPFGALPSTRDIRGSNYVHIGVIGDRVPGCAMVVAVLDNLCKGSSGQAIQNANLMLGLDEAEGL 335          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_RENSM (N-acetyl-gamma-glutamyl-phosphate reductase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=argC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 3
Query:    9 RGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKI----SYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +GL+ VA  +VTVSFTP L PM RG+ +T   ++AP +  E    QL+     +YE EEF+ +L +G  P T +V GSN+  + V  D   GR I+ SVIDNL KG +G A+Q++NI LG  EN GL
Sbjct:  219 QGLSSVAGEQVTVSFTPTLAPMSRGILTTATAKVAPQLLKETSAAQLRQIWVDAYEDEEFIHVLPEGQWPATQSVLGSNHVGIQVALDERTGRVIVCSVIDNLTKGTAGAAVQSMNIALGLEENLGL 345          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_ARTS2 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Arthrobacter sp. (strain FB24) GN=argC PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 3
Query:    9 RGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 386
            +GL + A   VTVSFTP L PM RG+ +T   ++ PGVT  +L    + +Y+ E FV LL +G  P T +V+GSN+ +M V  D   GR I+   IDNL KG +G A+Q++NI LG  E  GL  Q
Sbjct:  214 QGLGNAAGEAVTVSFTPTLAPMSRGILTTATAKVKPGVTAAELRSAWEEAYDDEPFVHLLPEGQWPSTKSVQGSNHAVMQVAFDAHTGRVIVTCAIDNLTKGTAGGAVQSMNIALGLAETAGLNLQ 339          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_RHOSK (N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=argC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +A   V V FTPHL PM RG+ + +YV+  P      L ++    Y  E F+++L  G +P T ++RGSNY  + V  DR+PG A++++V+DNL KG+SGQA+QN N+MLG  E  GL
Sbjct:  222 IAGRPVQVRFTPHLTPMNRGILANVYVKGDPQAVHRALTER----YLTETFLEVLPFGALPSTRDIRGSNYVHIGVIGDRVPGCAMVVAVLDNLCKGSSGQAIQNANLMLGLDEAEGL 335          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_NITMU (N-acetyl-gamma-glutamyl-phosphate reductase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=argC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 54/125 (43.20%), Postives = 79/125 (63.20%), Query Frame = 3
Query:    9 RGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLY 383
            +GL+  A   V ++F PHL PMIRG+ +T+YV++   V ++ L +     Y +E FV +L  G  P T +VRGSN C + V   +    A+I+SV DNLVKGA+GQA+QN+N+M G PE   + +
Sbjct:  216 QGLSQAAKHPVGLTFVPHLTPMIRGIHATLYVKLLKEVDLQALYEN---RYVNEPFVDVLPAGSHPETRSVRGSNLCRIAVHRPQGGDTAVILSVTDNLVKGAAGQAVQNMNLMFGLPETLAITH 337          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_EHRRW (N-acetyl-gamma-glutamyl-phosphate reductase OS=Ehrlichia ruminantium (strain Welgevonden) GN=argC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            + V F P+L+P+ RGM S+IY+E+  GV+  D+ + L + Y+  +F+ + E+  +  T +V G+NYC + VFP RIP   II+  IDNL+KGASGQA+QN NIM+   E T LL
Sbjct:  230 INVQFVPNLIPVKRGMLSSIYLELEEGVSPIDIREALLVFYKDSKFIFIDEEKAIT-TKSVIGTNYCYIGVFPGRIPNTVIIVCNIDNLLKGASGQAVQNFNIMMSCDETTALL 342          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_EHRRG (N-acetyl-gamma-glutamyl-phosphate reductase OS=Ehrlichia ruminantium (strain Gardel) GN=argC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 53/114 (46.49%), Postives = 77/114 (67.54%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            + V F P+L+P+ RGM S+IY+E+  GV+  D+ + L + Y+  +F+ + E+  +  T +V G+NYC + VFP RIP   II+  IDNL+KGASGQA+QN NIM+   E T LL
Sbjct:  230 INVQFVPNLIPVKRGMLSSIYLELEEGVSPIDIREALLVFYKDSKFIFIDEEKAIT-TKSVIGTNYCYIGVFPGRIPNTVIIVCNIDNLLKGASGQAVQNFNIMMSCDETTALL 342          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_PARDP (N-acetyl-gamma-glutamyl-phosphate reductase OS=Paracoccus denitrificans (strain Pd 1222) GN=argC PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 51/119 (42.86%), Postives = 79/119 (66.39%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            +A  +V + FTPHL+P+ RG+ ++ Y++  P    + +   L  +Y  E F+ +L  G +P   +V+GSN+C + V  DRI GRA+++S +DNL KG+SGQA+QN N+MLG PE  GL+
Sbjct:  222 LAGREVRIQFTPHLVPVNRGILASCYLKGEP----QAVHAALAAAYADEPFIVVLPYGQLPAMAHVQGSNFCHIGVTGDRISGRALVVSTLDNLCKGSSGQAVQNANLMLGLPETEGLM 336          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_METS3 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=argC PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYV---EMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            V VSFTPHL+P+IRG+Q+T +    E    +T ++L +  + +Y  E F+KL++ G +P   +VRGSN+  +  F     GR +++S IDNLV+GASGQA+QN+NIMLG  E TGL
Sbjct:  217 VKVSFTPHLVPVIRGIQTTSHSFLREEHSDITPDELRKFYEKTYGKEYFIKLMDDGEIPHLSSVRGSNFVHIGGFEIDDTGRIVMLSCIDNLVRGASGQAIQNMNIMLGLDETTGL 332          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_HELMI (N-acetyl-gamma-glutamyl-phosphate reductase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=argC PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 51/115 (44.35%), Postives = 77/115 (66.96%), Query Frame = 3
Query:   39 VTVSFTPHLMPMIRGMQSTIYVEMAPGV--TIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            + ++FTPHLMPM RG+ +T+Y ++  GV  T E++    +  Y  E F+ ++++GV P+T    GSN+  + +  +   GR II + IDNLVKGASGQA+QN+NI+ G PE TG+
Sbjct:  230 MAITFTPHLMPMTRGILTTVYADLKEGVQPTSEEVRNLYRQFYAGEPFIHVMDEGVWPQTKWSYGSNHAYIGLTVEARTGRVIITTAIDNLVKGASGQAIQNMNILFGLPETTGI 344          
The following BLAST results are available for this feature:
BLAST of EY680202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ARGC_RHOS17.267e-2244.92N-acetyl-gamma-glutamyl-phosphate reductase OS=Rho... [more]
ARGC_RENSM7.267e-2246.46N-acetyl-gamma-glutamyl-phosphate reductase OS=Ren... [more]
ARGC_ARTS27.267e-2245.24N-acetyl-gamma-glutamyl-phosphate reductase OS=Art... [more]
ARGC_RHOSK9.492e-2244.92N-acetyl-gamma-glutamyl-phosphate reductase OS=Rho... [more]
ARGC_NITMU9.492e-2243.20N-acetyl-gamma-glutamyl-phosphate reductase OS=Nit... [more]
ARGC_EHRRW9.492e-2246.49N-acetyl-gamma-glutamyl-phosphate reductase OS=Ehr... [more]
ARGC_EHRRG9.492e-2246.49N-acetyl-gamma-glutamyl-phosphate reductase OS=Ehr... [more]
ARGC_PARDP1.240e-2142.86N-acetyl-gamma-glutamyl-phosphate reductase OS=Par... [more]
ARGC_METS31.240e-2147.41N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_HELMI1.240e-2144.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Hel... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680202 ID=EY680202; Name=EY680202; organism=Citrus sinensis; type=EST; length=905bp
CCCGCGTCCGGGGACTGACTGATGTTGCAAGTTCAAAAGTAACAGTCAGT
TTCACTCCACACCTAATGCCAATGATCCGAGGCATGCAATCAACTATATA
CGTTGAAATGGCTCCAGGAGTGACAATCGAGGATTTATGCCAGCAATTAA
AAATCTCCTATGAGCATGAGGAATTTGTGAAGTTGTTGGAAAAGGGAGTT
GTCCCTCGGACTCACAATGTTCGAGGTTCTAATTACTGTTTGATGAATGT
CTTTCCTGATCGAATTCCTGGAAGAGCAATAATTATATCAGTTATTGATA
ATCTTGTGAAGGGAGCATCAGGTCAAGCTCTTCAAAATCTTAACATAATG
CTGGGATTTCCGGAAAATACTGGGCTTCTATATCAGCCCTTGTTTCCTTA
GTTTCTTTTCTTAATATGTTTAAAGAGTAAGCAGGCATTTTCAACACTAA
TTAACAAATCTCTCTTAGCCTACCCAAAACTCTCTTGAAAATTAGTATAT
TTCGTCTATCGACTATGGAGGCTGTTCAGGAACAGTTCAGGTTACTTTGG
GGGAATTTTGTTTTCAAAGCTCCGACACCCTTTTGAAGAGTTCCTCCATT
TCGTCGAATTGTCAGAAAAGAGTGGTGCTAGAAGCATGTAGAATAGTATA
ACAGGAGTCCATGTGTGTAATAATGAAAATTCACTTTACAGGGTTGAGGG
ATTTTTGAAAAATTGGTTTAAATTTTTGGGCTTGCAAGGGTGGGAACCAC
CTCCATACACCAAATAAAAAGTGCTTTTTAATTCAAAAAAAAAAAAAAAA
GGGGGGCCCGCTCCTAAAGGATACCAGCTTAAGTACCCGGGGGATGGCAA
AAGCCCTAACCCCTTCTAAAAGGGGCCCCCAAAATTTTAATATTCCCGGG
GGCCG
back to top