EY680202

Overview
NameEY680202
Unique NameEY680202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_SYNE7 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 3
Query:   18 TDVASSKVTVSFTPHLMPMIRGMQSTIYVEMA-PGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            +D++  +V + FTPHLMPM+RG+ +TIY ++  P +T ED     +  Y +   VK+L  G  P+T    G+N C + +  D   GR +++S IDNL+KG +GQA+Q LN+M G+ E  GL
Sbjct:  225 SDLSGHEVLLQFTPHLMPMVRGIHATIYAKLRDPNLTTEDCLTVYQAFYRNAPMVKVLTHGTYPQTKWAAGTNLCYLGLEVDARTGRIVLLSAIDNLIKGQAGQAIQCLNLMQGWEEGLGL 345          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_ROSDO (N-acetyl-gamma-glutamyl-phosphate reductase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 380
            +A   V + FTPHL+P  RG+  T Y+       I D   Q   +Y +E F+ +L  G  P T +VRGSN+C + V  DR PGRA++++ +DNL KG+SGQALQN N+ML   E  GL+
Sbjct:  222 LAGRPVQIQFTPHLIPANRGILGTGYLR-GEAAQIHDTLSQ---AYANEPFIDVLPFGETPSTRHVRGSNFCHIGVVADRQPGRALVVAALDNLTKGSSGQALQNANLMLNIKETEGLM 336          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_MICAN (N-acetyl-gamma-glutamyl-phosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 3
Query:   21 DVASSKVTVSFTPHLMPMIRGMQSTIYVEMA-PGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            D+A  +V V FTPHLMPM+RG+ ST+Y  +  P +  +DL       Y    FVK+L  GV P+T    G+N C + +  D    R I++S IDNLVKG SGQA+Q LN+M+G+ E+  L
Sbjct:  227 DLAGHEVRVQFTPHLMPMVRGILSTVYATLRDPNLVRDDLITIYNAFYRASPFVKILPGGVYPQTKWACGTNLCYLGIEVDPRTDRVIVMSAIDNLVKGQSGQAVQCLNLMMGWEESLAL 346          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_METM6 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            + + K+ VSFTPHL+P+ RG+ +T +  +   V+  D+ +  +  Y+ E FV++ E+G+V  T  VRG+N+C +  F     GR ++IS IDNLVKGASGQA+QN+NI++GF E  GL
Sbjct:  220 LGNKKLKVSFTPHLLPVTRGILTTAHSYLKEDVSRADVIEIYEEFYKDEFFVRIFEEGMVSLT-GVRGTNFCDIGGFEIDQHGRIVVISAIDNLVKGASGQAIQNMNIIMGFDEKEGL 336          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_GEOKA (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacillus kaustophilus GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            ++F+ HL+PM RG+ +TIY +    ++  DL    K SYE   F+++ + G  P T  V GSNYC + +  D   GR  ++SVIDNL+KGA+GQA+QN N+M+G+ E  GL
Sbjct:  227 ITFSTHLIPMTRGIMATIYAKAKQPISPNDLVDLYKTSYEGSPFIRVRKVGQFPATKEVYGSNYCDIGLAYDERTGRVTVVSVIDNLMKGAAGQAVQNFNLMMGWDEAEGL 337          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_CLOAB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Clostridium acetobutylicum GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 49/121 (40.50%), Postives = 80/121 (66.12%), Query Frame = 3
Query:   15 LTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            LT+ A  K+T++FTPHL+PM RG+ S  Y  +   + + ++    K  Y++E F+++++   +P T  V+GSNYC + +  D+   + I++S IDNL+KGA+ QA+QN+NIM G  E TG+
Sbjct:  220 LTNEAKEKITLTFTPHLVPMNRGILSVCYSNLKKEIELNEVYDIYKKFYKNEPFIRIID--TLPETRWVKGSNYCDIAIRIDKRTNKIIVLSAIDNLMKGAASQAVQNMNIMYGLAEKTGI 338          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_BACA2 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Bacillus amyloliquefaciens (strain FZB42) GN=argC PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.762e-21
Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 3
Query:   45 VSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            ++F+ HL PM RG+ +T+Y E  PG++   + +     Y+   FV++  +G  P T  V GSN+C ++V  D    RA I+SVIDNL+KGA+GQA+QNLNIM G+ E TGL
Sbjct:  228 ITFSAHLAPMTRGIMATMYTEAPPGMSAAQVRELYSEFYKDSYFVRIRPEGEFPATKEVYGSNFCDISVTVDERTNRATIVSVIDNLMKGAAGQAVQNLNIMNGWQEETGL 338          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_SYNPX (N-acetyl-gamma-glutamyl-phosphate reductase OS=Synechococcus sp. (strain WH8102) GN=argC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 3
Query:   21 DVASSKVTVSFTPHLMPMIRGMQSTIYVEMA-PGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 386
            +VA   V + FTPHL+PM+RG+ ST+Y  +  PG+T ED    L+  Y H   V +L  G  P T   R +N  L++V  D   G+ I++S IDNL+KG +GQ +Q LN+M G P  TGL  Q
Sbjct:  231 EVAGQDVRLQFTPHLVPMVRGLLSTVYARLRDPGLTAEDCTTVLEAVYRHHPCVSVLPVGTYPATKWARHTNRALVSVQVDTRTGQMILMSAIDNLIKGQAGQGVQCLNLMHGLPPETGLPLQ 353          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_PROMT (N-acetyl-gamma-glutamyl-phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=argC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21
Identity = 51/118 (43.22%), Postives = 78/118 (66.10%), Query Frame = 3
Query:   27 ASSKVTVSFTPHLMPMIRGMQSTIYVEMA-PGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            A  +V + FTPHL+PM+RG+ ST+Y  +  PG+T ED    ++  Y+ + F+ +L  G  P T  V+ +N  +++V  D+  GR +++SVIDNL+KG +GQA+QNLNIM G   + GL
Sbjct:  235 AGHQVNLQFTPHLVPMVRGILSTVYARLRDPGLTAEDCKIVIEAFYKDQPFIDILPVGTYPATKWVKNTNKVMISVEVDKRNGRIVLMSVIDNLLKGQAGQAIQNLNIMHGLESDIGL 352          
BLAST of EY680202 vs. ExPASy Swiss-Prot
Match: ARGC_METM7 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=argC PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.607e-21
Identity = 52/118 (44.07%), Postives = 80/118 (67.80%), Query Frame = 3
Query:   24 VASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 377
            + + K+ VSFTPHL+P+ RG+ +T +  +   V+  D+ +  +  Y+ E FV++ E+G+V  T  VRG+N+C +  F     GR +++S IDNLVKGASGQA+QN+NI++GF E  GL
Sbjct:  220 LGNKKLKVSFTPHLLPVTRGILTTAHSYLKEDVSRADVIEIYEEFYDGEFFVRIFEEGMVSLT-GVRGTNFCDIGGFEIDQHGRIVVVSAIDNLVKGASGQAIQNMNIIMGFDEKMGL 336          
The following BLAST results are available for this feature:
BLAST of EY680202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 317
Match NameE-valueIdentityDescription
ARGC_SYNE72.762e-2141.32N-acetyl-gamma-glutamyl-phosphate reductase OS=Syn... [more]
ARGC_ROSDO2.762e-2144.54N-acetyl-gamma-glutamyl-phosphate reductase OS=Ros... [more]
ARGC_MICAN2.762e-2145.00N-acetyl-gamma-glutamyl-phosphate reductase OS=Mic... [more]
ARGC_METM62.762e-2144.92N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]
ARGC_GEOKA2.762e-2144.14N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_CLOAB2.762e-2140.50N-acetyl-gamma-glutamyl-phosphate reductase OS=Clo... [more]
ARGC_BACA22.762e-2145.95N-acetyl-gamma-glutamyl-phosphate reductase OS=Bac... [more]
ARGC_SYNPX3.607e-2143.90N-acetyl-gamma-glutamyl-phosphate reductase OS=Syn... [more]
ARGC_PROMT3.607e-2143.22N-acetyl-gamma-glutamyl-phosphate reductase OS=Pro... [more]
ARGC_METM73.607e-2144.07N-acetyl-gamma-glutamyl-phosphate reductase OS=Met... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-E05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680202 ID=EY680202; Name=EY680202; organism=Citrus sinensis; type=EST; length=905bp
CCCGCGTCCGGGGACTGACTGATGTTGCAAGTTCAAAAGTAACAGTCAGT
TTCACTCCACACCTAATGCCAATGATCCGAGGCATGCAATCAACTATATA
CGTTGAAATGGCTCCAGGAGTGACAATCGAGGATTTATGCCAGCAATTAA
AAATCTCCTATGAGCATGAGGAATTTGTGAAGTTGTTGGAAAAGGGAGTT
GTCCCTCGGACTCACAATGTTCGAGGTTCTAATTACTGTTTGATGAATGT
CTTTCCTGATCGAATTCCTGGAAGAGCAATAATTATATCAGTTATTGATA
ATCTTGTGAAGGGAGCATCAGGTCAAGCTCTTCAAAATCTTAACATAATG
CTGGGATTTCCGGAAAATACTGGGCTTCTATATCAGCCCTTGTTTCCTTA
GTTTCTTTTCTTAATATGTTTAAAGAGTAAGCAGGCATTTTCAACACTAA
TTAACAAATCTCTCTTAGCCTACCCAAAACTCTCTTGAAAATTAGTATAT
TTCGTCTATCGACTATGGAGGCTGTTCAGGAACAGTTCAGGTTACTTTGG
GGGAATTTTGTTTTCAAAGCTCCGACACCCTTTTGAAGAGTTCCTCCATT
TCGTCGAATTGTCAGAAAAGAGTGGTGCTAGAAGCATGTAGAATAGTATA
ACAGGAGTCCATGTGTGTAATAATGAAAATTCACTTTACAGGGTTGAGGG
ATTTTTGAAAAATTGGTTTAAATTTTTGGGCTTGCAAGGGTGGGAACCAC
CTCCATACACCAAATAAAAAGTGCTTTTTAATTCAAAAAAAAAAAAAAAA
GGGGGGCCCGCTCCTAAAGGATACCAGCTTAAGTACCCGGGGGATGGCAA
AAGCCCTAACCCCTTCTAAAAGGGGCCCCCAAAATTTTAATATTCCCGGG
GGCCG
back to top