EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CLOAB (Glucose-1-phosphate adenylyltransferase OS=Clostridium acetobutylicum GN=glgC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14
Identity = 53/194 (27.32%), Postives = 97/194 (50.00%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 581
            GIY+ +   +   L +        NDFG  +IP   +   ++ AY ++GYW+D+GTI++ + AN+ +        + YD    IY+    +PP  +  ++DV  S++ EGC++   K+++SV+     I    II ++++M                     + +G N  IK++II  NAR+ DNV +  +D++
Sbjct:  193 GIYIFNWRFLKRFLEEDARDESSNNDFGKNIIPNMLNKKRKLYAYRFNGYWKDVGTIQSLWEANMDLLDDN-NSLNIYDPKWKIYSVNPTMPPQYIACNSDVKRSLVVEGCIVLG-KVYNSVLFPGVYIGRDTIITNSVIM-------------------PNVIVGNNVIIKKSIIGSNARVDDNVIVGTNDNI 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACCR (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14
Identity = 58/204 (28.43%), Postives = 100/204 (49.02%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR+  IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWSILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRNWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_PROAC (Glucose-1-phosphate adenylyltransferase OS=Propionibacterium acnes GN=glgC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 58/228 (25.44%), Postives = 105/228 (46.05%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK-MLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G Y+ S++ ++  L D    A+   D G +VIP   +      A +YD               YW D+GTI+A+++A++ +     P+F+ Y+   PI+T     P +K ++     D+++  GC+I    I+ +V+G R+ I   A ++++++M                     + IG N+ + RAI+DKN  + D  + V  D   + AR   G   S  G+  +
Sbjct:  200 GNYIFSREALVQALHDDAHSADSRHDMGGDVIPRFVNAA---DAQVYDFRDNEVPGNTEKDADYWRDVGTIDAYHDAHMDLVSVE-PEFNLYNPDWPIWTMQEQAPGAKFVMRGSCDDTLVSAGCIISGTDIYRTVLGPRARIERWARVDESIVMN-------------------NVAIGSNATVHRAILDKNVIVPDGAQ-VGVDHDHDRAR---GFTVSPGGVTVV 400          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_MYCSS (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium sp. (strain MCS) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 54/197 (27.41%), Postives = 95/197 (48.22%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLR---DKFPGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIG 548
            G Y+ +  V+++ +R   D     +D G ++IP   S GM   A +YD              GYW D+GT++AFY+A++ +     P F+ Y++  PI  +   L P+K ++     +SV+G G +I    + +SV+     I +GAI+E +++M                       IG+ + ++ AI+DKN  +G
Sbjct:  199 GNYIFTTKVLIDAIRADADDDDSDHDMGGDIIPRLVSDGM---AAVYDFSNNEVPGATERDHGYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNKRWPIRGESENLAPAKFVNGGSAQESVVGAGSIISAASVRNSVLSSNVYIDDGAIVEGSVIMPG-------------------TRIGRGAVVRHAILDKNVVVG 372          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THESQ (Glucose-1-phosphate adenylyltransferase OS=Thermotoga sp. (strain RQ2) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 59/241 (24.48%), Postives = 117/241 (48.55%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGM-RVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII*TVLFPSHFHPK 716
            GIYV + + +  +L +     N   DFG +VIP      +  + A+ +DGYW D+GT+ +++ ANL +   P+P F+ YD +   +T    +PP+ +   + V+ S++ EG  +    + +SV+     I  G +++++++M                       IG+N +++  II +N ++G+NV++ V  D+  +   +    L +  G+ ++ P  + I    +I   + P  F  K
Sbjct:  191 GIYVFNYEFLKKVLIEDENDPNSSHDFGKDVIPRILRENLGSLYAFRFDGYWRDVGTLRSYWEANLELV-LPVPPFNLYDPNWRFFTHTEEMPPAYVAPGSKVSTSLVSEGAEVYG-NVFNSVIFQGVKIGRGTVVKNSVIM-------------------TRTEIGENCYLENVIIAENVKVGNNVRMGVGEDAESKLDPKVYSGLLTVVGMNSVIPDDMVIGKNCVIGIGVRPEDFKSK 410          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THENN (Glucose-1-phosphate adenylyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 52/189 (27.51%), Postives = 98/189 (51.85%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGM-RVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            GIYV + + +  +L +     N   DFG +VIP         + A+ +DGYW D+GTI +++ ANL +   P+P F+ YD +   +T    +PP+ +  +A  + S+I EG  +   ++ +SV+     I +G +++++++M                       IG+N +++  I+ +N +IG+NVK+
Sbjct:  191 GIYVFNYEFLKRVLIEDENDPNSSHDFGKDVIPKILRENKGSLYAFRFDGYWRDVGTIRSYWEANLELV-LPVPPFNLYDPNWRFFTHSEEMPPAYVAPEARTSTSLISEGAEVYG-EVTNSVIFQGVRIGKGTVVKNSVIM-------------------TRTEIGENCYLENVIVAENVKIGNNVKM 358          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THEMA (Glucose-1-phosphate adenylyltransferase OS=Thermotoga maritima GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 60/241 (24.90%), Postives = 116/241 (48.13%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGM-RVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII*TVLFPSHFHPK 716
            GIYV + + +  +L +     N   DFG +VIP      +  + A+ +DGYW D+GT+ +++ ANL +   P+P F+ YD +   +T    +PP+ +   + V+ S++ EG  +    + +SV+     I  G +++++++M                       IG+N +++  II +N +IG NV++ V  D+  +   +    L +  G+ ++ P  + I    +I   + P  F  K
Sbjct:  191 GIYVFNYEFLKKVLIEDENDPNSSHDFGKDVIPRILRENLGSLYAFRFDGYWRDVGTLRSYWEANLELV-LPVPPFNLYDPNWRFFTHTEEMPPAYVAPGSKVSTSLVSEGAEVYG-NVFNSVIFQGVKIGRGTVVKNSVIM-------------------TRTEIGENCYLENVIIAENVKIGSNVRMGVGEDAESKLDPKVYSGLLTVVGMNSVIPDDMVIGKNCVIGIGVRPEDFKSK 410          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_MYCA9 (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 51/204 (25.00%), Postives = 95/204 (46.57%), Query Frame = 3
Query:   33 DVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA-DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            D++  L+ D      DF + ++PGAT             YW D+GT++AFY+A++ +     P F+ Y+R  PI  +   L P+K ++     +SV+G G ++    + +SV+     I +GA++E ++LM                     + +G+ + ++ AI+DKN  +G     V      +  R+ +    S  G+V +
Sbjct:  228 DIIPRLVADGRAAVYDFNTNLVPGATERD--------HAYWRDVGTLDAFYDAHMDLVSVH-PVFNLYNRRWPIRGESENLAPAKFVNGGSAQESVVGAGSIVSAASVRNSVLSSNVVIDDGAVVEGSVLMPG-------------------VRVGRGAVVRHAILDKNVVVG-----VGEQVGVDIERDRERFNVSAGGVVAV 398          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CLONN (Glucose-1-phosphate adenylyltransferase OS=Clostridium novyi (strain NT) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 56/196 (28.57%), Postives = 97/196 (49.49%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI--TKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 581
            GIY+ +  ++   L +        +DFG  +IP     G  + AY ++GYW+D+GTIE+ + AN+ +  TK P+     Y+++  IY+     PP     +A + +S++ EGC +   KI +SV+     +   +II+D+++M                     + IG+N  I++ II  N  I +N  I NSD +
Sbjct:  193 GIYIFNWKILKEFLIEDSELEDSDHDFGKNIIPSLLDSGYNLYAYSFNGYWKDVGTIESLWQANMDLLDTKNPL---DIYNKNWKIYSVSPSKPPQYTGPNAIIQNSLVVEGCAVFG-KIQNSVLFPEVEVGSNSIIQDSVIMS-------------------NVKIGQNVIIRKCIIGSNTIIENNSVIGNSDDI 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACWK (Glucose-1-phosphate adenylyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 58/204 (28.43%), Postives = 100/204 (49.02%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR+  IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRNWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_CLOAB1.057e-1427.32Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_BACCR1.057e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_PROAC1.380e-1425.44Glucose-1-phosphate adenylyltransferase OS=Propion... [more]
GLGC_MYCSS1.380e-1427.41Glucose-1-phosphate adenylyltransferase OS=Mycobac... [more]
GLGC_THESQ1.803e-1424.48Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_THENN1.803e-1427.51Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_THEMA1.803e-1424.90Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_MYCA91.803e-1425.00Glucose-1-phosphate adenylyltransferase OS=Mycobac... [more]
GLGC_CLONN1.803e-1428.57Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_BACWK1.803e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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