EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACC1 (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=glgC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.803e-14
Identity = 58/204 (28.43%), Postives = 100/204 (49.02%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR+  IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRNWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THEP1 (Glucose-1-phosphate adenylyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 61/241 (25.31%), Postives = 120/241 (49.79%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGM-RVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII*TVLFPSHFHPK 716
            GIYV + + +  +L +     N   DFG +VIP      +  + A+ +DGYW D+GT+ +++ ANL +   P+P F+ YD +   +T    +PP+ +   + V+ S++ EG  +    + +SV+     I  G +++++++M      T A+             IG+N +++  II ++ +IG+NV++ V  D+  +   +    L +  G+ ++ P  + I    +I   + P  F  K
Sbjct:  191 GIYVFNYEFLKKVLIEDENDPNSSHDFGKDVIPRILRENLGSLYAFRFDGYWRDVGTLRSYWEANLELV-LPVPPFNLYDPNWRFFTHTEEMPPAYVAPGSKVSTSLVSEGAEVYG-NVFNSVIFQGVKIGRGTVVKNSVIM------TRAE-------------IGENCYLENVIIAESVKIGNNVRMGVGEDAENKLDPKVYSGLLTVVGMNSVIPDDMVIGKNCVIGIGVGPEDFKSK 410          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_PASMU (Glucose-1-phosphate adenylyltransferase OS=Pasteurella multocida GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 65/235 (27.66%), Postives = 113/235 (48.09%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYDG-----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-----DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGILSSRAGIVTINPRML 656
            GIYV   D + ++L  +      ++DFG +++P A   G+ + A+ +             YW D+GT+++F+ +N+ +  +  P    YD+S PI   P    PSK          V +S+I  GCVI +  I +SV+  R  I+EG+ I+  +++                     + IGKN  +KR IID+++ I D ++I V+ +  ++  R + G      G+V + P ML
Sbjct:  217 GIYVFDADYLYDVLEREVSSPYTSHDFGKDILPKALEEGV-LYAHPFSRSCMGRNTEGEIYWRDVGTLDSFWQSNIDLVCEN-PQLDIYDQSWPIRGNPVQTYPSKFFYKKENARPVDNSLISGGCVITDASISYSVLFDRIKINEGSQIDHCVVL-------------------PQVTIGKNCKLKRCIIDRHSVIPDGMEIGVDLELDRQRFRVSSG------GVVLVTPSML 424          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_EXIS2 (Glucose-1-phosphate adenylyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 53/188 (28.19%), Postives = 97/188 (51.60%), Query Frame = 3
Query:   12 GIYVISKDVML-NLLRDKFPGAN--DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYT-QPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            GIYV + DV+  +L++D     +  DFG  +IP      + ++AY + GYW+D+GTI++ + AN+ + +   P+F  Y+ S  +++  P   P     +A +  S+I EGC I+  +I+HSV+     ++EG++++D+++                      + IGK+  I RAI+     + D   I
Sbjct:  193 GIYVFNWDVLKRHLIQDAGDAESSFDFGKNIIPNMLYENLNIRAYKFKGYWKDVGTIQSLWEANMDLLEAD-PEFDLYEPSWKVHSVNPNQQPQYIGNNASIETSIINEGCHIEG-EINHSVLFYGVDVAEGSLVKDSVIF-------------------PNVKIGKDVTIHRAILADGVVVEDGATI 359          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_ECO7I (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 65/238 (27.31%), Postives = 107/238 (44.96%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL----RDKFPGANDFGSEVIPGATSIGMRVQAYLY-------------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML 656
            GIYV   D +  LL    RDK   ++DFG ++IP  T  G+   AY +             + YW D+GT+EA++ ANL +    +P+   YDR+ PI T    LPP+K +           +S++  GCVI    +  SV+  R  ++    I+  +L+                     + +G++  ++R +ID+   I + + I   ++ +E AR       S  GIV +   ML
Sbjct:  214 GIYVFDADYLYELLEEDDRDK-NSSHDFGKDLIPKITEAGL---AYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLA-SVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLL-------------------PEVWVGRSCRLRRCVIDRACVIPEGMVI--GENAEEDARR---FYRSEEGIVLVTREML 422          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CORGL (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium glutamicum GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 58/214 (27.10%), Postives = 99/214 (46.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPR-YLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 596
            G Y+ + + ++  L+D     N   D G ++IP   S   R  A++YD              GYW D+GTI+AFY  ++ +     P F+ Y+   PI+T     LPP+K +   +   S++  G +I    + +SV+     + EGA +E  +LM                     + IGK + ++ AI+DKN  + D  +++  D V++A R
Sbjct:  199 GNYIFTTEALIQALKDDENNENSDHDMGGDIIPYFVS---RNDAHVYDFSGNIVPGATERDKGYWRDVGTIDAFYECHMDLISVH-PIFNLYNSEWPIHTTSEGNLPPAKFVRGGIAQSSMVSSGSIISAGTVRNSVLSNNVVVEEGATVEGAVLMPG-------------------VRIGKGAVVRHAILDKNVVVRDG-ELIGVDQVRDAQR 388          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACHK (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACCZ (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACAN (Glucose-1-phosphate adenylyltransferase OS=Bacillus anthracis GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BACAH (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=glgC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.355e-14
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKF---PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM-GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG 608
            GIY+ +  ++   L         +NDFG +V+P     G ++ AY ++GYW+D+GT+++ + AN+ + +      +  DR   IY+     PP  + + A V +S+I EGCVI+   + HSV+     + EG+++ D+++M GA                     IGKN  I+RAI+     I D   I    +V +     +G
Sbjct:  194 GIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGTVKSLWEANMDLLRDE-TSLNLNDRDWRIYSVNPNEPPQYIAEKAKVEESLINEGCVIEG-DVKHSVLFQGVTVEEGSMVIDSVVMPGAK--------------------IGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAEG 375          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_BACC11.803e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_THEP12.355e-1425.31Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_PASMU2.355e-1427.66Glucose-1-phosphate adenylyltransferase OS=Pasteur... [more]
GLGC_EXIS22.355e-1428.19Glucose-1-phosphate adenylyltransferase OS=Exiguob... [more]
GLGC_ECO7I2.355e-1427.31Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_CORGL2.355e-1427.10Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_BACHK2.355e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACCZ2.355e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAN2.355e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAH2.355e-1428.43Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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