EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.756e-61
Identity = 120/223 (53.81%), Postives = 155/223 (69.51%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            GIYV  +DV+++LL    P   DFG EVIP A +     QA+L++ YWEDIGTI +FY ANL +T++P P FSFYD  APIYT+ RYLPP+K+LD  VT S+IGEGC++K C + +SV+G+RS I    +I+D LLMGAD+YET   R    A G VP+GIG  S I+RAI+DKNA IG NV+IVN D V+EA RE  G +  R+GIV +    + IP  T+I
Sbjct:  212 GIYVFKRDVLIDLL-SHHPEQTDFGKEVIPAAAT-RYNTQAFLFNDYWEDIGTIASFYEANLALTQQPSPPFSFYDEQAPIYTRARYLPPTKLLDCQVTQSIIGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGADFYETSELRHQNRANGKVPMGIGSGSTIRRAIVDKNAHIGQNVQIVNKDHVEEADREDLGFM-IRSGIVVVVKGAV-IPDNTVI 430          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.409e-59
Identity = 117/222 (52.70%), Postives = 157/222 (70.72%), Query Frame = 3
Query:   15 IYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            +YV  KD++LNLLR +FP ANDFGSE+IP +T     V+AYL++ YWEDIGTI +F+ ANL +T+ P P FSFYD + PIYT  R LPPS + ++ + DS++  G  + NC + HSVVG+RS I     ++DT+++GADYYETDA+ R   A+G VP+GIG+N+ IK  IIDKNARIG NV I NS+ VQEA R ++G   + +GI  I+     IP GT+I
Sbjct:  266 VYVFKKDILLNLLRWRFPTANDFGSEIIPASTK-EFCVKAYLFNDYWEDIGTIRSFFRANLALTEHP-PRFSFYDATKPIYTSRRNLPPSAIDNSKIVDSIVSHGIFLTNCFVEHSVVGIRSRIGTNVHLKDTVMLGADYYETDAEIRSQLAEGKVPLGIGENTRIKDCIIDKNARIGKNVVIANSEGVQEADRSSEGFYMA-SGITVISKNST-IPDGTVI 483          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.532e-58
Identity = 112/223 (50.22%), Postives = 155/223 (69.51%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            GIYV  K+V+  LL +  P   DFG E+IP +      +QAYL+ GYWEDIGTI+AFY ANL + ++P P FSFY+   PIYT+ RYLPP+K L+  +T+S++ EGC++K+C+IH+S++G+R+ I     IEDT+LMGADYYE+ + R   A +G +P+GIG+ S I+RAI+DKNARIG NV IVN +++ E+ +E  G    R GIV I      I  GT+I
Sbjct:  211 GIYVFKKEVLAQLLEEN-PDQTDFGKEIIPFSAK-DYNLQAYLFKGYWEDIGTIKAFYEANLALNRQPSPRFSFYNEEYPIYTRSRYLPPTKALNCTITESMVSEGCILKDCRIHNSILGIRTRIEANCTIEDTMLMGADYYESPSLRESKAQEGKIPMGIGEGSTIRRAIVDKNARIGRNVTIVNKENIDESNQEESGFY-IRNGIVVILKNAT-IADGTVI 429          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.919e-58
Identity = 109/223 (48.88%), Postives = 156/223 (69.96%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+YV   DV+L LL+  +P +NDFGSE+IP A      VQAY++  YWEDIGTI++FYNA+L +T++  P+F FYD   P YT PR+LPP+K+ +  + D++I  GC +++C + HS+VG RS +  G  ++DT +MGADYY+T+++   L A+G VPIGIG+N+ I++ IIDKNA+IG NV I+N D VQEA R  +G    R+GI+ I  +   I  GT+I
Sbjct:  252 GVYVFKTDVLLKLLKWSYPTSNDFGSEIIPAAID-DYNVQAYIFKDYWEDIGTIKSFYNASLALTQE-FPEFQFYDPKTPFYTSPRFLPPTKIDNCKIKDAIISHGCFLRDCSVEHSIVGERSRLDCGVELKDTFMMGADYYQTESEIASLLAEGKVPIGIGENTKIRKCIIDKNAKIGKNVSIINKDGVQEADRPEEGFY-IRSGIIIILEKAT-IRDGTVI 470          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL1_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit (Fragment) OS=Triticum aestivum GN=AGA.1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.319e-57
Identity = 108/210 (51.43%), Postives = 151/210 (71.90%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G+Y+  K+++LNLLR +FP ANDFGSE+IP A    + V+AYL++ YWEDIGTI++F+ ANL + ++P   FSFYD S P+YT  R LPPS +  + +TDS+I  GC +  C++ HSVVG+RS I     ++DT+++GAD+YETD +R    A+G VPIGIG+N+ I+  IIDKNARIG NV I N++ VQEA R ++G    R+GI  +
Sbjct:   83 GVYIFKKEILLNLLRWRFPTANDFGSEIIPAAAR-EINVKAYLFNDYWEDIGTIKSFFEANLALAEQP-SKFSFYDASKPMYTSRRNLPPSMISGSKITDSIISHGCFLDKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDMERGDQLAEGKVPIGIGENTSIQNCIIDKNARIGKNVTIANAEGVQEADRASEG-FHIRSGITVV 289          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.116e-56
Identity = 101/210 (48.10%), Postives = 149/210 (70.95%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G+YV  K+V+L LLR  +P +NDFGSE+IP A      VQA+L++ YWEDIGTI +F++ANL +T++P P F FYD+  P +T PR+LPP+K+    + DS++  GC ++ C + HS+VG+RS +  G  ++DT++MGAD+Y+T+A+   L A+G VP+G+G+N+ IK  IIDKNA+IG NV I N+D V+E  R  +G    R+GI  +
Sbjct:  300 GVYVFRKEVLLKLLRSSYPTSNDFGSEIIPLAVG-EHNVQAFLFNDYWEDIGTIGSFFDANLALTEQP-PKFQFYDQKTPFFTSPRFLPPTKVDKCRILDSIVSHGCFLRECSVQHSIVGIRSRLESGVELQDTMMMGADFYQTEAEIASLLAEGKVPVGVGQNTKIKNCIIDKNAKIGKNVVIANADGVEEGDRPEEG-FHIRSGITVV 506          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 1.116e-56
Identity = 110/210 (52.38%), Postives = 150/210 (71.43%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G+YV  K+++LNLLR +FP ANDFGSE+IP +      V AYL++ YWEDIGTI +F+ ANL +T+ P   FSFYD + PIYT  R LPPSK+ ++ + DS+I  G  + NC I HS+VG+RS +     ++DT+++GADYYET+A+   L A+G+VPIGIG+N+ I+  IIDKNAR+G NV I NS+ +QEA R +DG    R+GI  I
Sbjct:  304 GVYVFKKEILLNLLRWRFPTANDFGSEIIPFSAK-EFYVNAYLFNDYWEDIGTIRSFFEANLALTEHP-GAFSFYDAAKPIYTSRRNLPPSKIDNSKLIDSIISHGSFLTNCLIEHSIVGIRSRVGSNVQLKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTKIQECIIDKNARVGKNVIIANSEGIQEADRSSDGFY-IRSGITVI 510          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL2_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.235e-56
Identity = 106/223 (47.53%), Postives = 150/223 (67.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+YV   DV+LNLL+  +P  NDFGSE+IP A      VQAYL++ YWEDIGT+++F++ANL +TK+P P F F D   P YT  R+LPP+K+  + + D++I  GC ++ C I HS+VG+RS +  G   +DT++MGADYY+T+ +   L A+G VPIG+G N+ I+  IIDKNA+IG +V I+N + V+EA R  +G    R+GI  I      I  GT+I
Sbjct:  301 GVYVFKTDVLLNLLKSAYPSCNDFGSEIIPSAVK-DHNVQAYLFNDYWEDIGTVKSFFDANLALTKQP-PKFDFNDPKTPFYTSARFLPPTKVDKSRIVDAIISHGCFLRECNIQHSIVGVRSRLDYGVEFKDTMMMGADYYQTECEIASLLAEGKVPIGVGPNTKIQNCIIDKNAKIGKDVVILNKEGVEEADRSAEGFY-IRSGITVIMKNAT-IKDGTVI 519          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.591e-55
Identity = 101/210 (48.10%), Postives = 146/210 (69.52%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G+YV   DV++ LL  K+P +NDFGSE+IP A      VQAYL++ YWEDIGTI++F+++NL +T++P P F FYD   P YT  R+LPP+K+    + DS++  GC ++   I HS+VG+RS +  G   +DT++MGADYY+T+++   L A+G VP+G+G+N+ IK  IIDKNA+IG +V I N+D V+EA R  +G    R+GI  I
Sbjct:  304 GVYVFRTDVLMELLNRKYPSSNDFGSEIIPSAVGES-NVQAYLFNDYWEDIGTIKSFFDSNLALTQQP-PKFEFYDPKTPFYTSARFLPPTKVDRCKIVDSIVSHGCFLQESSIQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAEGKVPVGVGQNTKIKNCIIDKNAKIGKDVVIANTDGVEEADRPNEGFY-IRSGITII 510          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL4_ARATH (Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.668e-52
Identity = 104/223 (46.64%), Postives = 145/223 (65.02%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+Y    + +LNLL  ++P +NDFGSEVIP A      VQ Y++  YWEDIGTI+ FY ANL + ++  P F FYD   P YT PR+LPP+K     + DS+I  GC ++ C +  S++G RS +  G  ++DTL++GADYY+T+++   L A+G VPIGIGK++ I++ IIDKNA+IG NV I+N   VQEA R  +G    R+GI  I  +   I  GT+I
Sbjct:  305 GVYCFKTEALLNLLTRQYPSSNDFGSEVIPAAIR-DHDVQGYIFRDYWEDIGTIKTFYEANLALVEER-PKFEFYDPETPFYTSPRFLPPTKAEKCRMVDSIISHGCFLRECSVQRSIIGERSRLDYGVELQDTLMLGADYYQTESEIASLLAEGKVPIGIGKDTKIRKCIIDKNAKIGKNVIIMNKGDVQEADRPEEGFY-IRSGITVIVEKAT-IQDGTVI 523          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_SYNE79.756e-6153.81Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGL3_SOLTU1.409e-5952.70Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_CYAP84.532e-5850.22Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGL1_SOLTU5.919e-5848.88Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_WHEAT1.319e-5751.43Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_ARATH1.116e-5648.10Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_ARATH1.116e-5652.38Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_SOLTU7.235e-5647.53Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_BETVU3.591e-5548.10Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL4_ARATH1.668e-5246.64Probable glucose-1-phosphate adenylyltransferase l... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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