EY680188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB5 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=glgC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11 Identity = 52/211 (24.64%), Postives = 91/211 (43.13%), Query Frame = 3 Query: 78 DFGSEVIPGATSIGMRVQAYLY-------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSG 671 DFG ++IP V AY + YW D+GT+++F+ AN+ + P P + YD PI+T LPP+K + D DS++ GC+I + SV+ + +++ED++++ + + ++ IK AI+D+ I + + I + A G S G+ + ML +P G Sbjct: 233 DFGKDIIPAIIE-KHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELL-SPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVL-------------------PDVVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRA----KGFRVSEKGVTLVTRDMLGLPVG 418
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_RHITR (Glucose-1-phosphate adenylyltransferase OS=Rhizobium tropici GN=glgC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11 Identity = 53/219 (24.20%), Postives = 94/219 (42.92%), Query Frame = 3 Query: 12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRV----------QAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVV--GLRS---CISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 596 GIYV ++ L+ N DFG ++IP G V + + YW D+GTI+A++ AN+ +T +P+ YD+S PI+T PP+K + D SV+ C+I +++S++ G+R+ EGA++ + + +G+ + +K +ID I + + +V D +A R Sbjct: 207 GIYVFHTKFLIECLKRDAADPNSSRDFGKDIIPHIVKNGKAVAHRFTQSCVRSDFEREAYWRDVGTIDAYWQANIDLT-AVVPELDIYDKSWPIWTYAEISPPAKFVHDDEDRRGSAVSSVVAGDCIISGASLYNSLLFTGVRANSYSKLEGAVVLPS------------------------VKVGRRAQLKNVVIDHGVTIPEGL-VVGEDPELDAKR 399
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_FRASN (Glucose-1-phosphate adenylyltransferase OS=Frankia sp. (strain EAN1pec) GN=glgC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11 Identity = 57/234 (24.36%), Postives = 102/234 (43.59%), Query Frame = 3 Query: 12 GIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQ-PRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641 G YV + DV+++ LR +D G ++P G A +YD GYW D+GT++++++A++ + P F+ Y+R PIYT P +PP+K + TDS++ G +I + SV+ ++ +++E+ ++M IG+ + ++ AI+DKN + V D + AR G S AG+ + Sbjct: 199 GNYVFTTDVLIDALRADAADPESVHDMGGSIVPMLVEQGT---AAVYDFAANQVPGALERDHGYWRDVGTLDSYFDAHMDLCALD-PVFNLYNRDWPIYTNVPPSVPPAKFVHDTPGRVGVATDSIVSNGVIISGGAVRRSVLSPGVRVNSWSVVENAVVMDNSV-------------------IGRRAVVRDAILDKNVVVPPGA-TVGVDKEHDRAR---GYQVSEAGVTVV 405
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPS (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgC PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11 Identity = 60/220 (27.27%), Postives = 99/220 (45.00%), Query Frame = 3 Query: 12 GIYVI-SKDVMLNLLRDKF--PGANDFGSEVIPGATSIGMRVQAYLYD-----------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVV--GLRS---CISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 596 GIYV +K ++ L RD ++DFG ++IP G V A+ +D YW D+GT++A++ AN+ +T +P YDR PI+T PP+K + + S++ GC+I + H+++ G+R+ EGA+I L AD IG++ + ++D RI D + +V D +A R Sbjct: 207 GIYVFDTKFLIEELHRDAANPDSSHDFGKDIIPYIVKHGKAV-AHHFDKSCRRSHAEDTSYWRDVGTVDAYWAANIDLT-DIVPQLDLYDREWPIWTYGEITPPAKFVHDKDGRRGEAVSSLVSGGCIISGASLRHTLLFTGVRAHSYTHIEGAVI----LPYAD--------------------IGRSCRLTNVVVDAEVRIPDGL-VVGEDPELDAKR 399
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_RHIRD (Glucose-1-phosphate adenylyltransferase OS=Rhizobium radiobacter GN=glgC PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11 Identity = 54/234 (23.08%), Postives = 100/234 (42.74%), Query Frame = 3 Query: 12 GIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRV----------QAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML 656 GIYV ++ +R + DFG ++IP G V + ++ YW D+GTI+A++ AN+ +T +PD YD+S PI+T PP+K + D SV+ C+I ++ S++ + + +E+ +++ + + IG+++ + +ID I + + IV D +A R + +GI I M+ Sbjct: 207 GIYVFHTKFLMEAVRRDAADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLT-DVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS-------------------VKIGRHAQLSNVVIDHGVVIPEGL-IVGEDPELDAKR----FRRTESGICLITQSMI 415
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_BRAJA (Glucose-1-phosphate adenylyltransferase OS=Bradyrhizobium japonicum GN=glgC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11 Identity = 49/215 (22.79%), Postives = 96/215 (44.65%), Query Frame = 3 Query: 12 GIYVISKDVMLNLLRD--KFPGAN-DFGSEVIPGATSIGMRVQAYLYD-----------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 596 GIYV + + L+ + P +N DFG ++IP G R A+ + YW D+GT++A++ AN+ +T +P+ +DR+ PI++ PP+K + S++ GC+I + S++ I+ A +E+ ++M + +G+ + +K +ID+ I + + ++ D +A R Sbjct: 207 GIYVFDAKFLFDQLKRDAEDPSSNHDFGKDIIPYIVKNG-RAIAHQFSTSCVRSGDDPRAYWRDVGTVDAYWAANIDLT-DVVPELDLFDRAWPIWSYSEITPPAKFVHDEESRRGQAVSSLVSGGCIISGASLRRSLLFTGVRINSYANVENAVIMPY-------------------VNVGRGARLKNVVIDRGVEIPEGL-VIGEDPELDAKR 399
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THECA (Glucose-1-phosphate adenylyltransferase OS=Thermus caldophilus GN=glgC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.260e-11 Identity = 52/205 (25.37%), Postives = 91/205 (44.39%), Query Frame = 3 Query: 12 GIYVISKDVMLNLL----RDKFPGANDFGSEVIPGATSIGMRVQAYLYDG-----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563 G Y+ + + LL RD+ A+DFG VIP A +G RV AY + YW D+GT++A+Y A++ + K P F P+ T + PP+K + +S++ G ++ + SV+ R ++ +++E ++L + +G+ I+ AIIDKN +I + +I Sbjct: 203 GNYIFRTEALFELLEADARDE-TSAHDFGKGVIPRAIRVGYRVYAYDFHRNPIPGQEGPNLYWRDVGTLDAYYEASMDLVKVD-PVFGLCSPVWPLRTANLFSPPAKFVHETGERVGRALNSLLAGGVIVSGGTVRESVLFRRVRVNSYSLVERSVLFD-------------------DVEVGRYCRIRNAIIDKNVKIPPHTEI 386 The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 287
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bpback to top |