EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.412e-51
Identity = 99/223 (44.39%), Postives = 149/223 (66.82%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+YV  +DV+LNLL+ ++   +DFGSE++P A      VQAY++  YWEDIGTI +F++AN+ + ++P P F FYD   P +T PRYLPP+K     + +++I  GC ++ CKI HS++G+RS ++ G+ +++ ++MGAD YET+ +   L ++G VPIG+G+N+ I   IID NARIG +V I N + VQEA R  +G    R+GIV I      I  GT++
Sbjct:  304 GVYVFKRDVLLNLLKSRYAELHDFGSEILPRALH-DHNVQAYVFTDYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIISHGCFLRECKIEHSIIGVRSRLNSGSELKNAMMMGADSYETEDEISRLMSEGKVPIGVGENTKISNCIIDMNARIGRDVVISNKEGVQEADRPEEGYY-IRSGIVVIQKNAT-IKDGTVV 522          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.412e-51
Identity = 99/223 (44.39%), Postives = 149/223 (66.82%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+YV  +DV+LNLL+ ++   +DFGSE++P A      VQAY++  YWEDIGTI +F++AN+ + ++P P F FYD   P +T PRYLPP+K     + +++I  GC ++ CKI HS++G+RS ++ G+ +++ ++MGAD YET+ +   L ++G VPIG+G+N+ I   IID NARIG +V I N + VQEA R  +G    R+GIV I      I  GT++
Sbjct:  305 GVYVFKRDVLLNLLKSRYAELHDFGSEILPRALH-DHNVQAYVFTDYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIISHGCFLRECKIEHSIIGVRSRLNSGSELKNAMMMGADSYETEDEISRLMSEGKVPIGVGENTKISNCIIDMNARIGRDVVISNKEGVQEADRPEEGYY-IRSGIVVIQKNAT-IKDGTVV 523          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL3_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 3.146e-51
Identity = 100/223 (44.84%), Postives = 147/223 (65.92%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+Y    + +L LL  ++P +NDFGSE+IP A      VQ Y+Y  YWEDIGTI++FY AN+ + ++  P F FYD++ P YT PR+LPP+K     + +SVI  GC +  C I  S++G RS +  G  ++DTL++GAD Y+T+++   L A+G+VPIGIG+++ I++ IIDKNA+IG NV I+N D V+EA R  +G    R+GI  +  +   I  GT+I
Sbjct:  303 GVYCFKTEALLKLLTWRYPSSNDFGSEIIPAAIK-DHNVQGYIYRDYWEDIGTIKSFYEANIALVEEH-PKFEFYDQNTPFYTSPRFLPPTKTEKCRIVNSVISHGCFLGECSIQRSIIGERSRLDYGVELQDTLMLGADSYQTESEIASLLAEGNVPIGIGRDTKIRKCIIDKNAKIGKNVVIMNKDDVKEADRPEEGFY-IRSGITVVVEKAT-IKDGTVI 521          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.845e-49
Identity = 96/210 (45.71%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            GIYV  KD +L+LL+ K+   +DFGSE++P A  +   VQA ++ GYWED+GTI++F++ANL +T++P   F FYD   P +T PR LPP+++    +  + I +GC+++ C I HSV+G+ S +S G  ++D+++MGAD YET+ +   L   G VP+GIG+N+ I+  IID NARIG NV I NS  +QEA    +G    R+GIV I
Sbjct:  298 GIYVFKKDALLDLLKSKYTQLHDFGSEILPRAV-LDHSVQACIFTGYWEDVGTIKSFFDANLALTEQP-SKFDFYDPKTPFFTAPRCLPPTQLDKCKMKYAFISDGCLLRECNIEHSVIGVCSRVSSGCELKDSVMMGADTYETEEEASKLLLAGKVPVGIGRNTKIRNCIIDMNARIGKNVVITNSKGIQEADHPEEGYY-IRSGIVVI 504          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL2_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.022e-49
Identity = 91/175 (52.00%), Postives = 128/175 (73.14%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKN 536
            G+Y+  K+++LNLLR +FP ANDFGSE+IP A    + V+AYL++ YWEDIGTI++F+ ANL + ++P   FSFYD S P+YT  R LPPS +  + +TDS+I  GC +  C++ HSVVG+RS I     ++DT+++GAD+YETDA+R    A+G VPIGIG+N+ I+  IID N
Sbjct:    9 GVYIFKKEILLNLLRWRFPTANDFGSEIIPAAAR-EINVKAYLFNDYWEDIGTIKSFFEANLALAEQP-SKFSFYDASKPMYTSRRNLPPSMISGSKITDSIISHGCFLDKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDAERGDQLAEGKVPIGIGENTSIQNCIIDMN 181          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGS_MAIZE (Glucose-1-phosphate adenylyltransferase small subunit (Fragment) OS=Zea mays GN=GLG1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.252e-48
Identity = 99/127 (77.95%), Postives = 112/127 (88.19%), Query Frame = 3
Query:  303 VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYY-ETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYY ET+AD++ LA  G +PIGIGKNSHI++AIIDKNARIGDNVKI+N+D+VQEAARETDG    + GIVT+    L +PSGT+I
Sbjct:    1 VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYAETEADKKLLAENGGIPIGIGKNSHIRKAIIDKNARIGDNVKILNADNVQEAARETDGYF-IKGGIVTVIKDAL-LPSGTVI 125          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.047e-46
Identity = 96/223 (43.05%), Postives = 143/223 (64.13%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+YV  +DV+LNLL+ ++   +DFGSE++P A      VQAY++  YWEDIGTI +F++AN  + ++P P F FYD   P +T PRYLPP+K     + +++I  GC ++ CKI H+     S ++ G+ +++ ++MGAD YET+ +   L ++G VPIG+G+N+ I   IID NARIG +V I N + VQEA R  +G    R+GIV I      I  GT++
Sbjct:  285 GVYVFKRDVLLNLLKSRYAELHDFGSEILPRALH-DHNVQAYVFTDYWEDIGTIRSFFDANRALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIILHGCFLRECKIEHTAF---SRLNSGSELKNAMMMGADSYETEDEMSRLMSEGKVPIGVGENTKISNCIIDMNARIGRDVVISNKEGVQEADRPEEGYY-IRSGIVVIQKNAT-IKDGTVV 500          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.849e-43
Identity = 90/224 (40.18%), Postives = 141/224 (62.95%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDG-ILSSRAGIVTINPRML*IPSGTII 680
            G+YV  +DV+L+LL+ ++   +DFGSE++P A      VQAY++  YWEDIGTI +F++AN+ + ++P P F FYD   P +T PRYLPP+K     + D++I  GC ++ C I HS+VG+ S ++ G  +++T++MGAD YET+ +   L A+G VPIG+G+N+ I   IID N + G   ++ N    +  + +  G  +  R+GIV +      I  GT+I
Sbjct:  302 GVYVFKRDVLLDLLKSRYAELHDFGSEILPKALH-EHNVQAYVFTDYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAIISHGCFLRECAIEHSIVGVPSRLNSGCELKNTMMMGADLYETEDEISRLLAEGKVPIGVGENTKISNCIIDMNCQ-GWKERLHNKQRGRSKSPDRPGRRILIRSGIVVVLKNAT-IKDGTVI 521          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRMU (Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans GN=glgC PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.356e-20
Identity = 64/195 (32.82%), Postives = 104/195 (53.33%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+ + D +  +L D        +DFG  VIP     G RV  Y ++GYW+D+GTIE+ + AN+    +   D    DRS  IY++    PP+ +  +A V DS++ +GC +   K+ HS++     + EGA I+D+ +M                 G+V   IG+ + I RAI+ + A+IG++V+I  ++ VQ
Sbjct:  192 GIYIFNWDRLRTMLVDAEKNNIDMSDFGKNVIPAYLESGERVYTYNFNGYWKDVGTIESLWEANMEYIGED-NDLHSRDRSWKIYSKNLIAPPNFITEEAHVKDSLVVDGCFVSG-KVEHSILSTNVQVKEGAQIKDSFIM----------------SGAV---IGEGAKITRAIVGEGAKIGEDVEIDGTEEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRU0 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgC PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 65/195 (33.33%), Postives = 104/195 (53.33%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+ +   +  +L D   G    +DFG  VIP     G RV  Y ++GYW+D+GTIE+ + AN+    +  P     +RS  IY++    PP+ + + A+VTDS++ +GC +   K+ HS++     + +GA I+D+ +M                 G+V   IG+ + I RAII + A IG+NV I  +D +Q
Sbjct:  192 GIYIFNWPRLRKMLVDSENGNIDMSDFGKNVIPAYLESGERVYTYNFNGYWKDVGTIESLWEANMEYIAENNP-LDSRNRSWKIYSKNHIAPPNFISEHAEVTDSLVVDGCFVTG-KVDHSILSANVHMKQGAEIKDSFIM----------------SGAV---IGEGAKINRAIIGEGAIIGNNVVIDGTDEIQ 365          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGL2_WHEAT1.412e-5144.39Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_HORVU1.412e-5144.39Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_ARATH3.146e-5144.84Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_MAIZE3.845e-4945.71Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_HORVU5.022e-4952.00Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGS_MAIZE4.252e-4877.95Glucose-1-phosphate adenylyltransferase small subu... [more]
GLGL3_WHEAT1.047e-4643.05Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE1.849e-4340.18Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_STRMU8.356e-2032.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRU01.091e-1933.33Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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