EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_EUBE2 (Glucose-1-phosphate adenylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgC PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 66/212 (31.13%), Postives = 111/212 (52.36%), Query Frame = 3
Query:   12 GIYVISKDVMLN-LLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            GIY+ S  V+ + L++ K     DFG  VIP   +   R+ AY Y+GYW+D+GT+ +++ AN+ +    IP F+ Y+    IYT+   +PP  +  DA +  S+IG+G  +   ++ +SV+G    I EG +I D+++M   +                   IGKN+ I ++II ++  IG+NV++     V E A          +G+VT+
Sbjct:  193 GIYIFSWKVLKDALIKLKDQQECDFGKHVIPYCFNNNKRIFAYEYNGYWKDVGTLSSYWEANMELI-DIIPIFNLYEEFWKIYTKTDTIPPQYIAKDAYIEKSIIGDGTEVYG-RVFNSVIGSGVVIEEGCVIRDSIIMNNSH-------------------IGKNTTITKSIIAEDVTIGENVEL----GVGEEAENVKFPKIYNSGLVTV 379          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THEM4 (Glucose-1-phosphate adenylyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgC PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.425e-19
Identity = 63/188 (33.51%), Postives = 104/188 (55.32%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            GIYV   + +  +L +     N   DFG ++IP   +   RV A+ ++GYW+D+GTI +++ +NL +T +PIP F+ +D +  IYT    +PP+ +  DA V +S+I EGC I   ++++SV+     + EG II+++++M                     + IG N  I+ AII +N  IG+ VKI
Sbjct:  191 GIYVFQWNFIREVLMEDAKDENSTHDFGKDIIPKIINT-KRVYAFPFEGYWKDVGTIYSYWESNLELT-RPIPPFNIHDENWKIYTHSEEMPPAYISDDARVKNSLISEGCEIYG-EVYNSVLAQGVEVGEGVIIKNSVVMSR-------------------VRIGNNCFIENAIIAENVVIGNEVKI 356          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_PHOPR (Glucose-1-phosphate adenylyltransferase OS=Photobacterium profundum GN=glgC PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.416e-19
Identity = 59/204 (28.92%), Postives = 101/204 (49.51%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRD---KFPGANDFGSEVIPGATSIGMRVQAYLYD------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA-----DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            G Y+ +KD +   L +   K   ++DFG ++IP    +G   + Y+YD            GYW D+GTIEA++ A++ +  +  P FS Y+R   ++T    LPP+ +LD+     D+ + +I  G  I+  +IH S++G R+ +    +I +++++G                    + IG N  I++AIIDKN  I     I
Sbjct:  196 GNYIFNKDTLCTELEEDAAKEDSSHDFGKDIIPKLFPLG---KVYVYDFTTNIIPGEKNTGYWRDVGTIEAYWQAHMDLLSEDAP-FSLYNRQWQLHTHYPPLPPATILDSENSKVDINNCMISAGSYIRGAQIHKSILGFRTNVDHNTMISESVILG-------------------DVKIGANCSIRKAIIDKNVHIAPGTVI 376          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THERP (Glucose-1-phosphate adenylyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.073e-19
Identity = 62/208 (29.81%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI----VNSDSVQEAARETDGI 611
            GIY+  ++++L+L     P A    DFG +VIP       RV  Y +DGYW+D+GT+++++ AN+ + +   P  + YD +  I+T+    PP+K+L+ A V  S++  GC+++   +  S++     +  GA++ D+++M      TD+              IG  + + R IIDK+  IG N  +     NS +  E +R   GI
Sbjct:  192 GIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTA-RVATYRFDGYWQDVGTVQSYWEANMALLEDE-PKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKAGAVVRDSIVM------TDS-------------VIGPGAVVDRCIIDKHVTIGANAYLGWGDDNSPNWLEPSRLNTGI 378          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THEAB (Glucose-1-phosphate adenylyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glgC PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.073e-19
Identity = 62/188 (32.98%), Postives = 105/188 (55.85%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA-DVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            GIYV     +  +L +       ++DFG ++IP       RV A+ +DGYW+D+GTI +++ +NL +T +PIP F+ +D +  IYT  + +PP+ + D+  V +S+I EGC I    + +SV+     I +G+I++++++M                     + IG+N +I+ AII +N  IGD VKI
Sbjct:  191 GIYVFQWSFIREVLIEDAKNDQSSHDFGKDIIPKIIQTE-RVFAFPFDGYWKDVGTIYSYWESNLELT-RPIPPFNIHDENWRIYTHSKEMPPAYIADSTKVKNSLISEGCEIYGA-VSNSVLAQGVEIGKGSIVKNSVIMS-------------------NVRIGENCYIENAIIAENVVIGDFVKI 356          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CORK4 (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.576e-18
Identity = 64/229 (27.95%), Postives = 111/229 (48.47%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFP---GANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYT-QPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G YV +   +++ L++       A+D G  +IP   + G   +A+++D              GYW D+GT++AFY A++ +     P F+ Y+R  PI+T     LPP+K +   +   S++  GC+I    + +SV+G    + EGA +E  +LM                     + IGK + ++ AI+DKN R+GDN  I       + AR+++    S+ G+V +
Sbjct:  199 GNYVFTTQALIDALKEDSEDENSAHDMGGNIIPYFVNRG---EAHVHDFSRNVVPGETDRDHGYWRDVGTVDAFYEAHMDLI-SVYPVFNLYNRKWPIHTSDDSNLPPAKFVKGGIAQSSIVAAGCIISAGTVRNSVLGPGVVVEEGASVEGCVLMDG-------------------VRIGKGAVVRHAILDKNVRVGDNALI-----GVDRARDSERFTLSQGGVVCV 399          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_LACLM (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=glgC PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18
Identity = 63/202 (31.19%), Postives = 97/202 (48.02%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFY---------NANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 581
            GIY+ +   +  +L + +   N   DFG +VIP     G  V AY + GYW+D+GTI++ +         N  L IT K    +S  D SAP +   +         + V ++++G+GC +    I HS++     + EG  IED+ +M   +                   IG+N  IK AII +NA+IGDNV+I+  D V
Sbjct:  192 GIYIFNWKRLREVLVNGYSKGNPMEDFGGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYSHNDISAPQFITEK---------SKVKNALVGDGCYVDGTVI-HSILSQNVHVQEGTTIEDSFIMSGTF-------------------IGENVTIKNAIIGENAKIGDNVEIIGEDEV 364          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_LACLA (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.688e-18
Identity = 61/202 (30.20%), Postives = 99/202 (49.01%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFY---------NANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 581
            GIY+ +   +  +L + +   N   DFG +VIP     G  V AY + GYW+D+GTI++ +         N  L IT K    +S  D SAP +   +         ++V ++++G+GC +    + HS++     + EG +IED+ +M   +                   IG+N  IK AII +NA+IGDNV+I+  + V
Sbjct:  192 GIYIFNWKRLREVLVNGYSKGNPMEDFGGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYSHNDISAPQFITEK---------SNVKNALVGDGCYVDG-TVLHSILSQNVHVQEGTVIEDSFIMSGTF-------------------IGENVTIKNAIIGENAKIGDNVEIIGENEV 364          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_LACLS (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=glgC PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.511e-18
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFY---------NANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 581
            GIY+ +   +  +L + +   N   DFG +VIP     G  V AY + GYW+D+GTI++ +         N  L IT K    +S  D SAP +   +           V ++++G+GC +    I HS++     + EG  IED+ +M   +                   IG+N  IK AII +NA+IGDNV+I+  D V
Sbjct:  192 GIYIFNWKRLREVLVNGYSKGNPIEDFGGDVIPAYIEAGENVFAYRFKGYWKDVGTIDSLHQSSMEFLDLNNELNITDKSWRIYSHNDISAPQFITEK---------LKVKNALVGDGCYVDGTVI-HSILSQNIHVQEGTTIEDSFIMSGTF-------------------IGENVTIKNAIIGENAKIGDNVEIIGEDEV 364          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_FERNB (Glucose-1-phosphate adenylyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgC PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.511e-18
Identity = 61/189 (32.28%), Postives = 103/189 (54.50%), Query Frame = 3
Query:   12 GIYVIS----KDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            GIYV +    K+V++   +D     +DFG  +IP   S G +V AY ++GYW+D+GTI++++  NL +  +PIP F+ +D +   YT+   + P+ + +  +V +S+I EGC I    + +SV+     I EGAI++++++M                     + +GKN  I+ AII +N  I D  KI
Sbjct:  191 GIYVFTWNFIKEVLIEDSKDN-SSDHDFGKNIIPKILSTG-KVYAYPFEGYWQDVGTIQSYWETNLELV-RPIPPFNLHDPNWRFYTRSEEMNPAYISENGNVRNSIISEGCEIYG-SVENSVISQGVFIDEGAIVKNSVIM-------------------TKVEVGKNVIIEDAIIAENTIIKDGCKI 356          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_EUBE21.091e-1931.13Glucose-1-phosphate adenylyltransferase OS=Eubacte... [more]
GLGC_THEM41.425e-1933.51Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLGC_PHOPR5.416e-1928.92Glucose-1-phosphate adenylyltransferase OS=Photoba... [more]
GLGC_THERP7.073e-1929.81Glucose-1-phosphate adenylyltransferase OS=Thermom... [more]
GLGC_THEAB7.073e-1932.98Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLGC_CORK41.576e-1827.95Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_LACLM2.058e-1831.19Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_LACLA2.688e-1830.20Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_LACLS3.511e-1831.19Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_FERNB3.511e-1832.28Glucose-1-phosphate adenylyltransferase OS=Fervido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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