EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_NITOC (Glucose-1-phosphate adenylyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgC PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 62/231 (26.84%), Postives = 105/231 (45.45%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYD-------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML 656
            GIYV +   +   L    D F  ++DFG ++IP       RV A+ +        GYW D+GT++AF+NANL +     P+ + YD   PI+T    LPP+K +  +        DS++  GC+I    I HS++     +     +  ++++                     + IGK+ HI++AI+DK   + D   ++  D  ++  R       +  G+V + P ML
Sbjct:  210 GIYVFNAAFLYEQLIKNADAFNSSHDFGKDIIPSILRSHYRVIAFPFSDVQGGDPGYWRDVGTVDAFWNANLELIGVS-PELNLYDEDWPIWTYQAQLPPAKFIFDNEDRRGMAVDSMVSGGCIIAGAWIGHSLLFSNVWVQSHTEVASSVIL-------------------PDVKIGKHCHIRKAILDKGCNVPDGT-VIGEDLEEDKRR----FYVTEEGVVLVTPEML 415          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRPS (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain CGSP14) GN=glgC PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 62/195 (31.79%), Postives = 99/195 (50.77%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP    +G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLELGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CLOCE (Glucose-1-phosphate adenylyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=glgC PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 66/228 (28.95%), Postives = 111/228 (48.68%), Query Frame = 3
Query:   12 GIYVISKDVMLN-LLRDK--FPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML--DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            G+Y+ +   +   L++D       NDFG  +IP     G  + AY Y GYW D+GTI+AF+ +N+ +  + +P F+ +D    IYT P  + P+  +   A V  S+I EGC +    I +S++   + I EGA+I+D+++M                       + KN++I R+II + A IG+  ++     V    +   GI  S  GI  +  +   IP+  +I
Sbjct:  193 GVYIFTWSTLREYLIKDNECSDSVNDFGKNIIPAMLGDGKSMWAYQYSGYWRDVGTIQAFWESNMDLVSR-VPQFNLFDPEWRIYT-PNPVKPAHYIASSACVKKSIIAEGCSVHGTVI-NSILFPGAYIEEGAVIQDSIIMSNS-------------------RVCKNAYINRSIISEQAIIGEKARLGEGPDVPNEYK--PGIYDS--GITVVGEKSS-IPADAVI 393          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRA5 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype V GN=glgC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17
Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGA---NDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     +  +L D        +DFG  VIP     G RV  Y +DGYW+D+GTIE+ + AN+    +     S  DRS  IY++    PP+ M  DA+V DS++ +GC +    + HS++     +   AII+D+ +M                       IG+ + I RAII ++A IGD V I  S  V+
Sbjct:  192 GIYIFDWKRLRTVLIDGEKNGIDMSDFGKNVIPAYLESGERVYTYNFDGYWKDVGTIESLWEANMEYIGEDNKLHS-RDRSWKIYSKNLIAPPNFMTEDANVKDSLVVDGCFVAG-NVEHSILSTNVQVKPNAIIKDSFVMSG-------------------ATIGEGAKINRAIIGEDAVIGDGVVIDGSKEVE 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRA3 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype III GN=glgC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17
Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGA---NDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     +  +L D        +DFG  VIP     G RV  Y +DGYW+D+GTIE+ + AN+    +     S  DRS  IY++    PP+ M  DA+V DS++ +GC +    + HS++     +   AII+D+ +M                       IG+ + I RAII ++A IGD V I  S  V+
Sbjct:  192 GIYIFDWKRLRTVLIDGEKNGIDMSDFGKNVIPAYLESGERVYTYNFDGYWKDVGTIESLWEANMEYIGEDNKLHS-RDRSWKIYSKNLIAPPNFMTEDANVKDSLVVDGCFVAG-NVEHSILSTNVQVKPNAIIKDSFVMSG-------------------ATIGEGAKINRAIIGEDAVIGDGVVIDGSKEVE 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRA1 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype Ia GN=glgC PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17
Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGA---NDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     +  +L D        +DFG  VIP     G RV  Y +DGYW+D+GTIE+ + AN+    +     S  DRS  IY++    PP+ M  DA+V DS++ +GC +    + HS++     +   AII+D+ +M                       IG+ + I RAII ++A IGD V I  S  V+
Sbjct:  192 GIYIFDWKRLRTVLIDGEKNGIDMSDFGKNVIPAYLESGERVYTYNFDGYWKDVGTIESLWEANMEYIGEDNKLHS-RDRSWKIYSKNLIAPPNFMTEDANVKDSLVVDGCFVAG-NVEHSILSTNVQVKPNAIIKDSFVMSG-------------------ATIGEGAKINRAIIGEDAVIGDGVVIDGSKEVE 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBCH (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio cholerae GN=glgC1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.742e-17
Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYD------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-----ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 545
            G Y+   + +   LR+       ++DFG ++IP    +  R + Y+YD             YW D+GTIE++++A++ +  K  P+FS Y+RS P++T    LPP+  +D       +TDS+I  G  I+   I+ SV+G RS I+ G+ I +++++G                    + IG    IKRAIIDK+  I
Sbjct:  196 GNYIFEAETLSKELREDAENNQSSHDFGKDIIP---KMFPRGKVYVYDFTTNKIKGEKESTYWRDVGTIESYWSAHMDLLDKD-PEFSLYNRSWPLHTYYPPLPPATFVDVKDKKVKITDSLISGGSYIQGSTIYKSVLGFRSNIAAGSFISESVILG-------------------DVKIGAGCTIKRAIIDKDVEI 370          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRP7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain 70585) GN=glgC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17
Identity = 63/195 (32.31%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA I D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEILDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_RHOSR (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus sp. (strain RHA1) GN=glgC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLR---DKFPGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G YV +  V+++ +R   +     +D G ++IP     G   +A +YD              GYW D+GT++AFY+A++ +     P F+ Y+R  PI  +   L P+K +   +  +SV+G GC++    + +SV+     +  GA +E ++LM                     + IGK + ++RAI+DKN  +GD  +I+  D      R+      S  G+V I
Sbjct:  199 GNYVFTTKVLVDAIRADSENSDSDHDMGGDIIPALVEAG---EASVYDFKDNIVPGATDRDRGYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNRRWPIRGETENLAPAKFVQGGLAQESVVGAGCILSAATVRNSVLSSNVMVDSGATVEGSVLMPG-------------------VRIGKGAVVRRAILDKNVVVGDG-EIIGVD----LERDKQRFAVSNGGVVAI 398          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_RHOOB (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus opacus (strain B4) GN=glgC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLR---DKFPGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G YV +  V+++ +R   +     +D G ++IP     G   +A +YD              GYW D+GT++AFY+A++ +     P F+ Y+R  PI  +   L P+K +   +  +SV+G GC++    + +SV+     +  GA +E ++LM                     + IGK + ++RAI+DKN  +GD  +I+  D      R+      S  G+V I
Sbjct:  199 GNYVFTTKVLVDAIRADSENSDSDHDMGGDIIPALVEAG---EASVYDFKDNVVPGATDRDRGYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNRRWPIRGETENLAPAKFVQGGLAQESVVGAGCILSAATVRNSVLSSNVMVDSGATVEGSVLMPG-------------------VRIGKGAVVRRAILDKNVVVGDG-EIIGVD----LERDKQRFAVSNGGVVAI 398          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_NITOC5.988e-1826.84Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_STRPS1.334e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_CLOCE1.334e-1728.95Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_STRA51.742e-1732.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRA31.742e-1732.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRA11.742e-1732.82Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC1_VIBCH1.742e-1730.81Glucose-1-phosphate adenylyltransferase 1 OS=Vibri... [more]
GLGC_STRP72.972e-1732.31Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_RHOSR2.972e-1727.19Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]
GLGC_RHOOB2.972e-1727.19Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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