EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_DEIDV (Glucose-1-phosphate adenylyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgC PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.972e-17
Identity = 67/234 (28.63%), Postives = 103/234 (44.02%), Query Frame = 3
Query:    3 TRPGIYVISKDVMLNLLRDKFPGAND---FGSEVIPGATSIGMRVQAYLYDG-----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGILSSRAGIVTI 641
            T  G Y+ S+  +  LL     G  D   FG  VIP A + G  VQAY +             YW D+GTI+A+Y AN+ +     P+F  Y+ S P+ T   + PP+K +           +SV+  G +I    +  SV+G        A+IE  +L                      + +G++SH+ RAI+DKN +I    KI V+ D  +E      G   + +G+V +
Sbjct:  199 TSMGNYIFSRRALEELLHTSISGQEDGFDFGHNVIPRALADGYHVQAYDFHRNPIPGQSNPNLYWRDVGTIDAYYEANMDLISIN-PEFDIYNPSWPLRTSSEFSPPAKFVHESDGRKGQAFNSVMAGGVIISGATVRDSVLGRNIRAHSYALIESCVLFD-------------------DVEVGRHSHLNRAIVDKNVKIPPGTKIGVDHDHDRER-----GFTVTESGVVVV 407          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRZT (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRZP (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRZJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain JJA) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRPN (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRPJ (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRPI (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CLOTH (Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.881e-17
Identity = 56/189 (29.63%), Postives = 101/189 (53.44%), Query Frame = 3
Query:   12 GIYVISKDVMLN-LLRD--KFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML--DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI 563
            G+Y+ + +V+   L+RD      A+DFG  +IP     G  + AY ++GYW D+GTI+A++ +N+ +  + +P+F+ +D +  IYT P  + P+  +     V  S++ EGC+I    + +SV+     +SEGA I D+++M                       IG+N+ I + II +  ++G NV++
Sbjct:  193 GVYIFNWEVLKEYLIRDDQNEESAHDFGKNIIPMMLKEGRSMWAYKFNGYWRDVGTIQAYWESNMDLISR-VPEFNLFDPAWKIYT-PNPVKPAHYIGPTGSVKKSIVAEGCMIYG-SVRNSVLFPGVYVSEGAEIVDSIVMSDSV-------------------IGENTQIYKCIIGEEVKVGKNVRM 359          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRS7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 62/195 (31.79%), Postives = 97/195 (49.74%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+ +   +  +L D        +DFG  VIP     G RV  Y + GYW+D+GTIE+ + AN+    +        DRS  IY++    PP+ +  DA+V DS++ +G  I   K++HS++     + +GA ++D+ +M                     + IG+ + I RAII + A IGD+V I  S  VQ
Sbjct:  192 GIYIFNWQRLRTMLVDAEKNNIDMSDFGQHVIPSYLESGERVYTYNFKGYWKDVGTIESLWEANMEYIGEE-NALDSRDRSWKIYSKNHIAPPNFITEDAEVKDSLVVDGSFISG-KVNHSILSTNVQVRKGAEVKDSFIMS-------------------DVIIGEGARITRAIIGEGAVIGDHVVIDGSKDVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRR6 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSRGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_DEIDV2.972e-1728.63Glucose-1-phosphate adenylyltransferase OS=Deinoco... [more]
GLGC_STRZT3.881e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZP3.881e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRZJ3.881e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPN3.881e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPJ3.881e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRPI3.881e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_CLOTH3.881e-1729.63Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_STRS75.069e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_STRR65.069e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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