EY680188

Overview
NameEY680188
Unique NameEY680188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRP2 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=glgC PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G +DFG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDG-TVKHSILSRGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_MYXXD (Glucose-1-phosphate adenylyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=glgC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.647e-17
Identity = 64/220 (29.09%), Postives = 105/220 (47.73%), Query Frame = 3
Query:   12 GIYVISKDVMLN-LLRDKF--PGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD--------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 596
            G Y+ S DV++  ++RD      A+DFG  +I   + +  R   Y+YD              GYW D+G I+ +Y +N+ + +   P F+ Y+   PI+TQP   PP+K + AD          D+++ EGC+I    +  SV+  +  ++  + +ED+LL     +E               + IG+   I+RAIIDKN  I   + I   D V++  R
Sbjct:  196 GNYLFSTDVLVQEVVRDAANEASAHDFGKSII---SELYKRAPVYVYDFAQNEVPGQEAKERGYWRDVGNIDVYYQSNMDLVEVD-PTFNLYNDRWPIHTQPNNYPPAKFVFADEQNHRVGHAMDTLVAEGCIISGGSVRRSVLSPKVRVNSYSEVEDSLL-----FEN--------------VTIGRRCRIRRAIIDKNVEIPPGMTI-GFDPVEDRRR 391          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THIDA (Glucose-1-phosphate adenylyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgC PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 65/231 (28.14%), Postives = 110/231 (47.62%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPG---ANDFGSEVIPGATSIGMRVQAYLY------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYT-QPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML 656
            GIYV SKD +   L +       ++DFG ++IP + S   R+ A+ +       GYW D+G +  ++  N+ +     P  + YD   PI+T QP+Y PP+K +  D        DS++  GCV+   ++  SV+   + +   ++++D++++                     + IG+N  I  AIIDK   I D   ++  D V++A R       +  GIV + PRML
Sbjct:  222 GIYVFSKDFLYKALIEDAGATRSSHDFGKDIIPSSISRA-RIMAFPFRDREGKPGYWRDVGALNCYWQTNMDLCSIE-PALNLYDCEWPIWTYQPQY-PPAKFIFDDEGRRGEAIDSLVAGGCVLSGARVKRSVLFFATTVGCSSLVKDSVIL-------------------PKVRIGRNCRISCAIIDKGTVIPDGT-VIGEDPVEDAKR----FHVTPEGIVLVTPRML 425          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_NITEU (Glucose-1-phosphate adenylyltransferase OS=Nitrosomonas europaea GN=glgC PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 62/235 (26.38%), Postives = 107/235 (45.53%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDG----------YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDAD------VTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKI-VNSDSVQEAARETDGILSSRAGIVTINPRML 656
            GIYV +   +   L    D    ++DFG +VIP   +   RV A+ +            YW D+GT++A++ AN+ +T    PD + YD   PI+T    LPP+K +  D        DS++  GC+I    +  S++     I   + IED++++                     + I +++++KR +++K  +I + +K+  N D  ++    TD       GI  I P ML
Sbjct:  217 GIYVFNAKFLYEQLIQDHDMDQSSHDFGKDVIPRLVASNARVYAHRFQNSCVNMASGVPYWRDVGTVDAYWKANIDLT-TITPDLNLYDEDWPIWTHQEQLPPAKFVFDDDDRRGQALDSMVSGGCIISGATVRRSLLFSNVQIRGYSTIEDSVIL-------------------PNVSIDRHAYLKRVVVEKECQIPEGLKVGFNPDEDRKHFYVTDD------GITLITPEML 425          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRP4 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=glgC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.926e-16
Identity = 61/195 (31.28%), Postives = 97/195 (49.74%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM-LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQ 584
            GIY+     + N+L        G + FG  VIP     G  V AY + GYW+D+GTIE+ + AN+     P       +R   IY++    PP+ +  +A V DS++ +GC +    + HS++   + + EGA + D+++M                 G++   IG+ + IKRAII + A I D V+I  +D VQ
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSKVGMSXFGKNVIPNYLESGESVYAYEFSGYWKDVGTIESLWEANMEYI-SPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDGA-VKHSILSTGAQVREGAEVLDSVIM----------------SGAI---IGQGAKIKRAIIGEGAIISDGVEIDGTDEVQ 365          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_RHOE4 (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=glgC PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.926e-16
Identity = 62/228 (27.19%), Postives = 109/228 (47.81%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLR---DKFPGANDFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTI 641
            G YV +  V+++ +R   +     +D G ++IP   + G   +A +YD              GYW D+GT++AFY+A++ +     P F+ Y+R  PI      L P+K +   +  +SV+G G ++    + +SV+     I +GA +E ++LM                     + IGK + ++RAI+DKN  +GD  +I+  D      R+ +    S+ G+V I
Sbjct:  199 GNYVFTTKVLVDAIRADSENSDSDHDMGGDIIPALVAAG---EASVYDFKDNVVPGATDRDRGYWRDVGTLDAFYDAHMDLVSVH-PIFNLYNRRWPIRGATENLAPAKFVKGGLAQESVVGAGSILSAATVRNSVLSSNVMIEDGATVEGSVLMPG-------------------VRIGKGAVVRRAILDKNVVVGDG-EIIGVD----LERDRERFAVSQGGVVAI 398          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC1_ALHEH (Glucose-1-phosphate adenylyltransferase 1 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.926e-16
Identity = 54/211 (25.59%), Postives = 100/211 (47.39%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRD---KFPGANDFGSEVIPGATSIGMRVQAYLYD-------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD------ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAAR 596
            GIYV  +D +  LLR+    F  + DFG +VIP A +   +VQAY +         YW D+GT++AF+ AN+ +  +  P+ + YD   PI+T    LPP+K +           +S++  G +I   ++  S++  +  +  GA + + +++                     + +G+   I++A+ID+  RI     ++  D  ++  R
Sbjct:  211 GIYVFDRDYLFQLLREDAENFDSSRDFGKDVIPNAIA-NHKVQAYPFSDPVSGQQAYWRDVGTVDAFFQANMELIGED-PELNLYDEEWPIWTYQAQLPPAKFIQGRDGRHGTAINSMVSGGDIIHGAEVRDSLLFSQVVVQPGATVHEAVIL-------------------PDVRVGEGCRIRKAVIDEGCRIPAGT-VIGEDPAEDRRR 399          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 64/227 (28.19%), Postives = 116/227 (51.10%), Query Frame = 3
Query:   12 GIYVIS-KDVMLNLLRDKF--PGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML*IPSGTII 680
            GIYV + K +   L+RD+      +DFG ++IP   + G ++ A+ ++GYW D+GT+ +++ +NL +T +PIP  + YDR    +TQ   +PP+     + + +S+I EGC I    + +SV+     I E A+++++++M                       IG+N  I  A+I +   + + V I   D   +A  + D  + +  G +T+      IPSG++I
Sbjct:  190 GIYVFNWKFLKEYLIRDEQNNESTHDFGHDIIPLMINEGCQIYAFKFNGYWRDVGTVRSYWESNLELT-RPIPPLNLYDRHWRFFTQTEEMPPAYCAPTSKIVNSIISEGCEIYGF-VENSVIFQGVYIGENAVVKNSVVM-------------------TSTKIGENCVITDAVIAERVIVENRVIIGEGD---DAKNKLDSDVYT--GQITVIGMYSVIPSGSVI 390          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_STRSV (Glucose-1-phosphate adenylyltransferase OS=Streptococcus sanguinis (strain SK36) GN=glgC PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 60/194 (30.93%), Postives = 99/194 (51.03%), Query Frame = 3
Query:   12 GIYVISKDVMLNLL---RDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD-ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV 581
            GIY+     + N+L          +DFG  VIP     G  V AY + GYW+D+GT+E+ + AN+     P       +R   IY++    PP+ + + + V DS++ +GC +    + HS++   + + +GA+IED+++M                 G+V   IGK++ IKRAII + A I D V+I  ++ V
Sbjct:  192 GIYIFDWQRLRNMLVAAEKSNVDMSDFGKNVIPNYLESGESVYAYDFAGYWKDVGTVESLWEANMEYI-SPENALDSRNRRWKIYSRNLISPPNFISENSHVEDSLVVDGCFVDG-TVKHSILSTGAQVKKGAVIEDSVIM----------------SGAV---IGKDAKIKRAIIGEGAIISDGVEIDGTEEV 364          
BLAST of EY680188 vs. ExPASy Swiss-Prot
Match: GLGC_CORJK (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium jeikeium (strain K411) GN=glgC PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 62/234 (26.50%), Postives = 110/234 (47.01%), Query Frame = 3
Query:   12 GIYVISKDVMLNLLRDKFPGAN---DFGSEVIPGATSIGMRVQAYLYD--------------GYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYT-QPRYLPPSKMLDADVT-DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGILSSRAGIVTINPRML 656
            G YV +   +++ L++     N   D G ++IP     G   +AY+YD              GYW D+GT++AFY A++ +     P F+ Y++  PI+T +   LPP+K +   +   S++  GC+I    + +SV+     + EGA +E  ++M                     + IG+ + ++ AIIDKN ++    +I+  D     AR+ D    S+ G+V I   ++
Sbjct:  199 GNYVFTAQTLIDALKEDSEDENSNHDMGGDIIPRLVDRG---EAYVYDFSNNYVPGETERDKGYWRDVGTVDAFYEAHMDLISVH-PVFNLYNQQWPIHTAETGNLPPAKFVKGGIAQSSMVSAGCIISAGTVRNSVLSENVVVEEGASVEGCVIMPG-------------------VRIGRGAVVRHAIIDKNVQVSAG-EIIGVD----RARDQDRFTISKGGVVCIGKNVV 404          
The following BLAST results are available for this feature:
BLAST of EY680188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
GLGC_STRP25.069e-1731.79Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_MYXXD8.647e-1729.09Glucose-1-phosphate adenylyltransferase OS=Myxococ... [more]
GLGC_THIDA1.129e-1628.14Glucose-1-phosphate adenylyltransferase OS=Thiobac... [more]
GLGC_NITEU1.129e-1626.38Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_STRP41.926e-1631.28Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_RHOE41.926e-1627.19Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]
GLGC1_ALHEH1.926e-1625.59Glucose-1-phosphate adenylyltransferase 1 OS=Alkal... [more]
GLGC_THELT2.516e-1628.19Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_STRSV2.516e-1630.93Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_CORJK2.516e-1626.50Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-D02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680188 ID=EY680188; Name=EY680188; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGGGTATTTATGTCATCAGCAAAGATGTGATGTTAAATCTG
CTAAGGGATAAATTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCC
TGGTGCAACTTCCATTGGGATGAGAGTGCAAGCATATTTATATGATGGCT
ACTGGGAAGACATTGGAACAATTGAGGCTTTCTACAATGCGAATCTGGGG
ATCACCAAAAAGCCAATTCCGGATTTCAGCTTCTATGACCGTTCTGCTCC
AATCTATACACAGCCTAGATATCTACCTCCTTCTAAGATGCTTGATGCTG
ATGTCACTGATAGTGTAATTGGTGAAGGCTGTGTGATTAAGAATTGCAAA
ATTCACCATTCTGTTGTTGGGCTTCGATCTTGCATATCAGAAGGTGCAAT
TATCGAAGATACTTTACTTATGGGAGCAGATTATTATGAGACGGATGCGG
ACAGGAGGTTTTTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAG
AATTCTCACATCAAGAGAGCAATAATCGACAAAAATGCTCGAATTGGGGA
TAATGTGAAGATCGTCAACAGTGACAGTGTGCAAGAAGCAGCAAGGGAAA
CAGATGGAATACTTTCATCAAGAGCGGGGATTGTCACAATTAATCCAAGG
ATGCTTTGAATTCCAAGTGGAACCATAATCTAAACTGTCCTCTTCCCTTC
CCATTTTCATCCCAAGCTACCGGGCCCCTCCCCTCCAACCCCCGAAAAGG
CCCTAAAATCCCAGCCTGCTTCCCCCTTTACCTTTGGCCCTCTTTTTTCC
CAAAACCCGTTAATTTTCCGGGGCGGGGGTAAGGTTATTTTTGAAAAGAG
AAAAAAGGACCCTGGGAAAAAGG
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