EY680143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.200e-40 Identity = 84/195 (43.08%), Postives = 117/195 (60.00%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L PVD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPFCKKY+++ RAP YF +D + MK+EY++ + ++ G + T + +HP +++V + GGL +E+P LVY+SREKRP HH KAGAMN L Sbjct: 344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNALVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNAL 538 HSP 2 Score: 28.8758 bits (63), Expect = 2.200e-40 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 554 LDCDHYINNSKALREAMCF 572
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.200e-40 Identity = 84/195 (43.08%), Postives = 117/195 (60.00%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L PVD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPFCKKY+++ RAP YF +D + MK+EY++ + ++ G + T + +HP +++V + GGL +E+P LVY+SREKRP HH KAGAMN L Sbjct: 344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRVNALVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNAL 538 HSP 2 Score: 28.8758 bits (63), Expect = 2.200e-40 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 554 LDCDHYINNSKALREAMCF 572
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.201e-40 Identity = 84/194 (43.30%), Postives = 116/194 (59.79%), Query Frame = 3 Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 L PVD+FV+T D EPP++T NTVLS+LA+DYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF ++ + MK+EY++ I ++S L G + T + +HP +++V + GG E+P LVY+SREKRP HH KAGAMN L Sbjct: 314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQDKVHPTFVKERRAMKREYEEFKVRINAQVAKASKVPLEGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGFDVEGHELPRLVYVSREKRPGFQHHKKAGAMNAL 507 HSP 2 Score: 30.4166 bits (67), Expect = 2.201e-40 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + V +AMCF Sbjct: 523 LDCDHYVNNSKAVREAMCF 541
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.865e-40 Identity = 84/195 (43.08%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L PVD+FV+T D EPP++T NTVLS+L+VDYPV K+ACYVSDD + L F SL E ++FAK WVPFCKK+N++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V + GGL +E+P L+Y+SREKRP HH KAGAMN L Sbjct: 350 QLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGNELPRLIYVSREKRPGFQHHKKAGAMNAL 544 HSP 2 Score: 29.6462 bits (65), Expect = 4.865e-40 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 560 VDCDHYFNNSKAIKEAMCF 578
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.076e-39 Identity = 83/195 (42.56%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L PVD+FV+T D EPP++T NTVLS+LAVDYPV K+ACYVSDD + L F +L E ++F+K WVPFCKK+N++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V + GGL +E+P L+Y+SREKRP HH KAGAMN L Sbjct: 337 QLAPVDVFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVACYVSDDGSAMLTFEALSETAEFSKKWVPFCKKFNIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINILVAKAQKIPEDGWTMEDGTSWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLIYVSREKRPGFQHHKKAGAMNAL 531 HSP 2 Score: 29.6462 bits (65), Expect = 1.076e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 547 VDCDHYFNNSKAIKEAMCF 565
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.076e-39 Identity = 86/195 (44.10%), Postives = 117/195 (60.00%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L PVD+FV+T D EPPIIT NT+LS+LAVDYPV+K++CYVSDD S L F +L E S+FA+ WVPFCKKYNV+ RAP YF +D + MK+EY++ I ++ G + T + +HP +++V +G +E+P LVY+SREKRP + HH KAGAMN + Sbjct: 290 KLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGKEGAFDIDGNELPRLVYVSREKRPGYAHHKKAGAMNAM 484 HSP 2 Score: 28.4906 bits (62), Expect = 1.076e-39 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + ++MCF Sbjct: 500 LDCDHYINNSKAIRESMCF 518
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.402e-39 Identity = 85/195 (43.59%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L+F SL E S+FA+ WVPFCKKY+++ RAP YF +D + MK+EY++ I ++ G + T + +HP +++V GGL +E+P LVY+SREKRP HH KAGAMN L Sbjct: 334 QLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLAETSEFARKWVPFCKKYSIEPRAPEWYFAAKIDYLKDKVQTSFVKDRRAMKREYEEFKIRINALVSKALKCPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNAL 528 HSP 2 Score: 28.8758 bits (63), Expect = 1.402e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 544 LDCDHYINNSKALREAMCF 562
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.261e-39 Identity = 83/195 (42.56%), Postives = 114/195 (58.46%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGG---LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L P+D FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCKKY+++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V GG +E+P LVY+SREKRP + HH KAGAMN L Sbjct: 354 QLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAPYFVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDIEGNELPRLVYVSREKRPGYNHHKKAGAMNAL 548 HSP 2 Score: 29.6462 bits (65), Expect = 5.261e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 564 LDCDHYINNSKAIKEAMCF 582
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.262e-39 Identity = 84/195 (43.08%), Postives = 115/195 (58.97%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPF KKYN++ RAP YF +D + MK+EY++ I ++ G + T + +HP +++V + GGL +E+P LVY+SREKRP HH KAGAMN L Sbjct: 351 QLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNAL 545 HSP 2 Score: 28.8758 bits (63), Expect = 5.262e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 561 LDCDHYINNSKALREAMCF 579
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.929e-39 Identity = 83/196 (42.35%), Postives = 116/196 (59.18%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSL-----FDLTGGMTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560 +L PVD FV+T D EPP++T NTVLS+L+VDYPV K++CYVSDD + L F +L E S+FAK WVPFCKK+N++ RAP YF ++ + MK++Y++ I ++ + + G N R +HP +++V GG +E+P LVY+SREKRP + HH KAGAMN L Sbjct: 354 QLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFQQKIDYLKDKVAASFVRERRAMKRDYEEFKVRINALVAKAQKVPEEGWTMQDGSPWPGNNVR-DHPGMIQVFLGQSGGRDVEGNELPRLVYVSREKRPGYNHHKKAGAMNAL 548 HSP 2 Score: 29.6462 bits (65), Expect = 8.929e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 557 IDCDMYANNPEIVLQAMCF 613 +DCD Y NN + + +AMCF Sbjct: 564 LDCDHYINNSKAIREAMCF 582 The following BLAST results are available for this feature:
BLAST of EY680143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680143 ID=EY680143; Name=EY680143; organism=Citrus sinensis; type=EST; length=915bpback to top |