EY680143
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.932e-39 Identity = 83/194 (42.78%), Postives = 114/194 (58.76%), Query Frame = 3
Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGG---LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF Q+ + MK+EY++ I ++ G + T + +HP +++V + GG +E+P LVY+SREKRP HH KAGAMN L
Sbjct: 343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINALVAKAQKVPAEGWIMKDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNAL 536 HSP 2 Score: 29.6462 bits (65), Expect = 8.932e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + + +AMCF
Sbjct: 552 LDCDHYINNSKAIREAMCF 570
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.932e-39 Identity = 83/194 (42.78%), Postives = 114/194 (58.76%), Query Frame = 3
Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGG---LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF Q+ + MK+EY++ I ++ G + T + +HP +++V + GG +E+P LVY+SREKRP HH KAGAMN L
Sbjct: 343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRINALVAKAQKVPAEGWIMKDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNAL 536 HSP 2 Score: 29.6462 bits (65), Expect = 8.932e-39 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + + +AMCF
Sbjct: 552 LDCDHYINNSKAIREAMCF 570
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.163e-38 Identity = 83/195 (42.56%), Postives = 114/195 (58.46%), Query Frame = 3
Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGG---LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
+L PVD FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCK+Y+++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V GG +E+P LVY+SREKRP + HH KAGAMN L
Sbjct: 353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDVEGNELPRLVYVSREKRPGYNHHKKAGAMNAL 547 HSP 2 Score: 29.6462 bits (65), Expect = 1.163e-38 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + + +AMCF
Sbjct: 563 LDCDHYINNSKAIKEAMCF 581
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.163e-38 Identity = 83/195 (42.56%), Postives = 114/195 (58.46%), Query Frame = 3
Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGG---LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
+L PVD FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCK+Y+++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V GG +E+P LVY+SREKRP + HH KAGAMN L
Sbjct: 353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDVEGNELPRLVYVSREKRPGYNHHKKAGAMNAL 547 HSP 2 Score: 29.6462 bits (65), Expect = 1.163e-38 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + + +AMCF
Sbjct: 563 LDCDHYINNSKAIKEAMCF 581
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.163e-38 Identity = 83/195 (42.56%), Postives = 116/195 (59.49%), Query Frame = 3
Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
+L P+D+FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F +L E ++FA+ WVPFCKK+N++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V + GGL +E+P LVY+SREKRP HH KAGAMN L
Sbjct: 347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEGWTMADGTAWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNAL 541 HSP 2 Score: 26.9498 bits (58), Expect = 1.163e-38 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y N+ + + +AMCF
Sbjct: 557 VDCDHYFNSSKALREAMCF 575
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.163e-38 Identity = 83/195 (42.56%), Postives = 116/195 (59.49%), Query Frame = 3
Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
+L P+D+FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F +L E ++FA+ WVPFCKK+N++ RAP YF ++ + MK+EY++ I ++ G T + +HP +++V + GGL +E+P LVY+SREKRP HH KAGAMN L
Sbjct: 347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKVPEEGWTMADGTAWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNAL 541 HSP 2 Score: 26.9498 bits (58), Expect = 1.163e-38 Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y N+ + + +AMCF
Sbjct: 557 VDCDHYFNSSKALREAMCF 575
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.168e-38 Identity = 83/192 (43.23%), Postives = 118/192 (61.46%), Query Frame = 3
Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLT------GGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
+LP +D+FV TAD +EPP++ VNTVLS+ A+DYP KLA Y+SDD S L FY+L EA++FAK WVPFCKK+NV+ +P Y + + K Y +++ IE AA+ + + G ++ R NH TI++V+ + + G + IP LVY+SREKRP+H H++KAGAMN L
Sbjct: 107 DLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCLDSAA------EEVAKLYREMAARIETAARLGRIPEEARVKYGDGFSQWDADATRRNHGTILQVLVDGREGNTIAIPTLVYLSREKRPQHHHNFKAGAMNAL 292 HSP 2 Score: 29.261 bits (64), Expect = 1.168e-38 Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCFASGLQERK 637
+DCDMYANN + A+C +E K
Sbjct: 308 LDCDMYANNSKSTRDALCILLDEKEGK 334
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.976e-38 Identity = 82/194 (42.27%), Postives = 113/194 (58.25%), Query Frame = 3
Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
L PVD FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F SL E ++FA+ WVPFCKKY+++ RAP YF ++ + MK++Y++ I ++ G + T + +HP +++V G +E+P LVY+SREKRP + HH KAGAMN L
Sbjct: 264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEGWIMQDGTPWPGNNPRDHPGMIQVFLGETGARDFDGNELPRLVYVSREKRPGYQHHKKAGAMNAL 457 HSP 2 Score: 30.4166 bits (67), Expect = 1.976e-38 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + V +AMCF
Sbjct: 473 LDCDHYVNNSKAVREAMCF 491
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.976e-38 Identity = 82/194 (42.27%), Postives = 113/194 (58.25%), Query Frame = 3
Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
L PVD FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F SL E ++FA+ WVPFCKKY+++ RAP YF ++ + MK++Y++ I ++ G + T + +HP +++V G +E+P LVY+SREKRP + HH KAGAMN L
Sbjct: 264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYFSQKIDYLKDKIHPSFVKERRAMKRDYEEYKVRINALVAKAQKTPEEGWIMQDGTPWPGNNPRDHPGMIQVFLGETGARDFDGNELPRLVYVSREKRPGYQHHKKAGAMNAL 457 HSP 2 Score: 30.4166 bits (67), Expect = 1.976e-38 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + V +AMCF
Sbjct: 473 LDCDHYVNNSKAVREAMCF 491
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 9.653e-38 Identity = 82/194 (42.27%), Postives = 114/194 (58.76%), Query Frame = 3
Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGM----TVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
L P+D FV+T D EPPIIT NTVLS+LAVDYPV +++CYVSDD S L F +L E ++FA+ WVPFCKK+ ++ RAP YF ++ + MK+EY++ I ++ G + T + +HP +++V ++G L E+P LVY+SREKRP + HH KAGAMN L
Sbjct: 289 LAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSQGALDVEGSELPRLVYVSREKRPGYNHHKKAGAMNSL 482 HSP 2 Score: 30.4166 bits (67), Expect = 9.653e-38 Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 2
Query: 557 IDCDMYANNPEIVLQAMCF 613
+DCD Y NN + V +AMCF
Sbjct: 498 LDCDHYVNNSKAVREAMCF 516 The following BLAST results are available for this feature:
BLAST of EY680143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680143 ID=EY680143; Name=EY680143; organism=Citrus sinensis; type=EST; length=915bpback to top |