EY680143

Overview
NameEY680143
Unique NameEY680143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 7.076e-28
Identity = 79/231 (34.20%), Postives = 112/231 (48.48%), Query Frame = 3
Query:    6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI---EHAAK-RSSLFDLTGGM------------------TVFSNTER-------------MNHPTIVKVISE--------NKGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLT 563
            LP +D+FVTTAD   EP + T N++LS+LA DYPV +  CY+SDD+   L + ++ EA+KFA LWVPFC+K+ ++ R P  YF                 D + ++KEYD     I   EH  K RS  ++   G+                  T    +E              +NHP+  + +          +  G+   +P LVY++REKRP   H  KAGAMN LT
Sbjct:  183 LPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYFELKSHPYMGRAQEEFVNDRRRVRKEYDDFKARINGLEHDIKQRSDSYNAAAGVKDGEPRATWMADGSQWEGTWIEQSENHRKGDHAGIVLVLLNHPSHARQLGPPASADNPLDFSGVDVRLPMLVYVAREKRPGCNHQKKAGAMNALT 413          

HSP 2 Score: 26.1794 bits (56), Expect = 7.076e-28
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 2
Query:  557 IDCDMYANNPEIVLQAMCFASG 622
            +DCD Y NN + +   +CF  G
Sbjct:  428 LDCDHYINNSQALRAGICFMLG 449          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.176e-27
Identity = 82/250 (32.80%), Postives = 117/250 (46.80%), Query Frame = 3
Query:    3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE-------------HAAKRSSLFDL------TGG--------------------------MTVFSNTERMNHPTIVKVI-------SENKGG----------LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LWVPFC+K+ ++ R P  YF                +D + +K+EYD+    +              HA +     +L       GG                          +       R +H  I++V+         + GG          +   +P LVY+SREKRP + H+ KAGAMN L
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQREKMKAGGDEQQLEPIKIPKATWMADGTHWPGTWLQASPEHARGDHAGIIQVMLKPPSPSPSSSGGDMEKRVDLSGVDTRLPMLVYVSREKRPGYDHNKKAGAMNAL 596          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.176e-27
Identity = 82/250 (32.80%), Postives = 117/250 (46.80%), Query Frame = 3
Query:    3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE-------------HAAKRSSLFDL------TGG--------------------------MTVFSNTERMNHPTIVKVI-------SENKGG----------LSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LWVPFC+K+ ++ R P  YF                +D + +K+EYD+    +              HA +     +L       GG                          +       R +H  I++V+         + GG          +   +P LVY+SREKRP + H+ KAGAMN L
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRVNGLPDAIRRRSDAYHAREEIQAMNLQREKMKAGGDEQQLEPIKIPKATWMADGTHWPGTWLQASPEHARGDHAGIIQVMLKPPSPSPSSSGGDMEKRVDLSGVDTRLPMLVYVSREKRPGYDHNKKAGAMNAL 596          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.536e-27
Identity = 84/231 (36.36%), Postives = 117/231 (50.65%), Query Frame = 3
Query:    3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEH----AAKRSSLFD--------------LTGGM----TVFSNTER-------------MNHPTI-----VKVISENK---GGLSDEIPHLVYISREKRPKHPHHYKAGAMNVL 560
            ELP VD+FVTT D   EP + TVN++LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ RAP  YF                 D + +++EY++    I+       KRS  ++              +  G     T F   E              +NHPT      V    +N     G+   +P LVYISREKRP + H  KAGAMN L
Sbjct:  174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYFAMKTQAYRGGVAGELMSDRRRVRREYEEFKVRIDSLFSTIRKRSDAYNRAKDGKDDGENATWMADGTHWPGTWFEPAENHRKGQHAGIVQVLLNHPTSKPRFGVAASVDNPLDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNAL 404          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.536e-27
Identity = 81/245 (33.06%), Postives = 119/245 (48.57%), Query Frame = 3
Query:    3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFDLTGGMTVFSNTE------------------------------------RMNHPTIVKVISENKG-----GLSDE------------IPHLVYISREKRPKHPHHYKAGAMNVL 560
            +LP +D+FV+TAD E EP + T  T+LS+LAVDYPV KLACYVSDD  + L F ++ EA+ FA +WVPFCKK++++ R P  YF                +D + +K+E+D+    I    +   +RS  F+    M +  +                                      + NH  I++V+ +        G+ D+            +P LVY+SREKRP + H+ KAGAMN L
Sbjct:  377 DLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVKGDPTKGKRRNDFVKDRRRVKREFDEFKVRINGLPDSIRRRSDAFNAREDMKMLKHLRETGADPSEQPKVKKATWMADGSHWPGTWAASAPDHAKGNHAGILQVMLKPPSPDPLYGMHDDDQMIDFSDVDIRLPMLVYMSREKRPGYDHNKKAGAMNAL 621          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.007e-27
Identity = 80/244 (32.79%), Postives = 121/244 (49.59%), Query Frame = 3
Query:    3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFDL-------------TGGMTVFSNTE-------------------------RMNHPTIVKVISE-----------NKG-----GLSDEIPHLVYISREKRPKHPHHYKAGAMN 554
            +LP VD+FV+TAD E EPP++T NT+LS+LAVDYP+ KL+ Y+SDD  + L F ++ EA +FA+ WVPFC+K++++ R P  YF                +D + +K+EYD+    I    E   KR+  F++              GG+      E                         + +H  I++++S+           N+G     G+   +P   Y+SREKRP   H+ KAGAMN
Sbjct:  263 DLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRINGLPEQIKKRAEQFNMREELKEKRIAREKNGGVLPPDGVEVVKATWMADGTHWPGTWFEPKPDHSKGDHAGILQIMSKVPDLEPVMGGPNEGALDFTGIDIRVPMFAYVSREKRPGFDHNKKAGAMN 506          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.621e-27
Identity = 80/244 (32.79%), Postives = 121/244 (49.59%), Query Frame = 3
Query:    3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFD------------------------------LTGG-------MTVFSNTERMNHPTIVKV------------ISENKGGLSD---EIPHLVYISREKRPKHPHHYKAGAMNVL 560
            +LP  D+FV+TAD E EPP++T NT+LS+LA +YPV KL+CYVSDD  + L F ++ EA+ FA +WVPFC+K+ ++ R P  YF                +D + +K+E+D+    +    +   +RS  +                               +  G       +T  S+  + +H  I++V            +SE    L+D    +P LVY+SREKRP + H+ KAGAMN L
Sbjct:  377 DLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRRRVKREFDEFKVRVNSLPDSIRRRSDAYHAREEIKAMKMQRQNRDDEPMEPVKIPKATWMADGTHWPGTWLTSASDHAKGDHAGIIQVMLKPPSDEPLHGVSEGFLDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNAL 620          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.897e-26
Identity = 76/227 (33.48%), Postives = 111/227 (48.90%), Query Frame = 3
Query:    6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEH----AAKRSSLFDLTGG-------------------MTVFSNTERMNHPTIVKVISENK------------------GGLSDEIPHLVYISREKRPKHPHHYKAGAMNV 557
            LP +D+F+ T D   EP I T+N +LS+LA DYPV K ACY+SDD  S +++  L+E +KFA LWVPFC+K++++ RAP  YF                 D + M++EYD+    ++       KRS  ++                       +    N ++ NH  IV+V+  +                     +   +P LVYI+REKRP + H  KAGAMNV
Sbjct:  169 LPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRREYDEFKVRLDALFTVIPKRSDAYNQAHAEEGVKATWMADGTEWPGTWIDPSENHKKGNHAGIVQVMLNHPSNQPQLGLPASTDSPVDFSNVDVRLPMLVYIAREKRPGYDHQKKAGAMNV 395          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.697e-26
Identity = 77/229 (33.62%), Postives = 114/229 (49.78%), Query Frame = 3
Query:    6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKK----EYDKLSQNI----EHAAKRSSLFD-------------LTGG-------MTVFSNTERMNHPTIVKVISE------------------NKGGLSDEIPHLVYISREKRPKHPHHYKAGAMN 554
            LP +D+FVTTAD   EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P  YF              +++KN  +    EYD+    +    E   KRS +++             +  G       +    N  + +H  IVKV+ +                  N       IP LVY+SR K P + H+ KAGA+N
Sbjct:  167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF--ELEAPSYTGSAQEEFKNDSRIVHLEYDEFKVRLEALPETIRKRSDVYNSMKTDQGAPNATWMANGTQWPGTWIEPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGNNLNFNATDVRIPMLVYVSRGKNPNYDHNKKAGALN 393          

HSP 2 Score: 25.7942 bits (55), Expect = 3.697e-26
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  560 DCDMYANNPEIVLQAMCF 613
            DCD Y NN + +  A+CF
Sbjct:  412 DCDHYINNSQALRAAICF 429          
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.263e-26
Identity = 77/229 (33.62%), Postives = 114/229 (49.78%), Query Frame = 3
Query:    6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKK----EYDKLSQNI----EHAAKRSSLFD-------------LTGG-------MTVFSNTERMNHPTIVKVISE------------------NKGGLSDEIPHLVYISREKRPKHPHHYKAGAMN 554
            LP +D+FVTTAD   EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P  YF              +++KN  +    EYD+    +    E   KRS +++             +  G       +    N  + +H  IVKV+ +                  N       IP LVY+SR K P + H+ KAGA+N
Sbjct:  167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF--ELEAPSYTGSAPEEFKNDSRIVHLEYDEFKVRLEALPETIRKRSDVYNSMKTDQGAPNATWMANGTQWPGTWIEPIENHRKGHHAGIVKVVLDHPIRGHNLSLKDSTGNNLNFNATDVRIPMLVYVSRGKNPNYDHNKKAGALN 393          

HSP 2 Score: 25.0238 bits (53), Expect = 6.263e-26
Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  560 DCDMYANNPEIVLQAMCF 613
            DCD Y NN +    A+CF
Sbjct:  412 DCDHYINNSQAFRAAICF 429          
The following BLAST results are available for this feature:
BLAST of EY680143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLF6_ORYSJ7.076e-2834.20Probable mixed-linked glucan synthase 6 OS=Oryza s... [more]
CSLD1_ORYSJ1.176e-2732.80Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI1.176e-2732.80Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLF4_ORYSJ1.536e-2736.36Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLD3_ORYSJ1.536e-2733.06Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD1_ARATH2.007e-2732.79Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLD2_ARATH2.621e-2732.79Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLF8_ORYSJ2.897e-2633.48Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLF3_ORYSI3.697e-2633.62Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF3_ORYSJ6.263e-2633.62Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-H05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680143 ID=EY680143; Name=EY680143; organism=Citrus sinensis; type=EST; length=915bp
AGGAGCTGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTGAACTC
GAGCCGCCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCAGTTGA
TTATCCAGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTGCTCAC
CTCTCAATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGCTTTGG
GTTCCATTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTTAGATA
CTTCCCAGATAGTGAGCCGTCCGATTCCAGTTCAGGGGAACTCCTGCAAG
ACTGGAAAAACATGAAGAAAGAGTATGATAAACTTAGCCAAAACATAGAA
CATGCAGCCAAAAGATCTTCTTTATTTGATCTAACAGGAGGAATGACTGT
TTTCTCCAATACAGAACGCATGAATCATCCAACAATAGTGAAGGTTATAT
CGGAGAACAAAGGAGGTCTCTCAGATGAGATACCACATTTAGTTTACATA
TCAAGAGAGAAAAGGCCAAAGCATCCCCATCACTACAAAGCAGGGGCCAT
GAATGTATTGACTGCGACATGTATGCCAACAATCCAGAGATTGTTCTTCA
AGCTATGTGTTTTGCATCTGGGCTCCAAGAACGAAAAACGAATTTGCGTT
TATTCAATCTCCACCATATTTCTATGACAGAACCAGAAAATCTGTGCCTT
TTAAATGAGTATATCGGGAAAAGAAATTTGGGGAATTTCAGGACCTTTCC
TTTCAGGGTACACGGAACCTTTTTCTTAAACAAAAATGTTTGAAAATGGG
CCCATTCCCTCCTTTTAAAATTTGAAACATCCAAGGGAAAATAAGGGGGG
AAAAAAAAAACCTGCTTGAAAAAAATTTCCGGAAAATTTTCAAAAAAAAA
TTTCTTTCAAAATTC
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