EY680143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 347 +LP +D+FVT+AD E EPP++T NT+LS+LA DYPV KLACY+SDD + L+F +L E + FA+ WVPFC+K+ V+ R P YF ++ + +K+EYD+ + Sbjct: 407 DLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRV 523
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.031e-23 Identity = 71/227 (31.28%), Postives = 110/227 (48.46%), Query Frame = 3 Query: 6 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQ---DWKNMKKEYDKLSQNIE-------------------HAAKRSSLFDLTGGMTVFS----NTERMNHPTIVKVISENKG------------------GLSDEIPHLVYISREKRPKHPHHYKAGAMN 554 LP +D+F+ T D EP + T+N++LS+LA DYP + A Y+SDD S ++ L+E ++FA LWVPFC+K+ V+ RAP YF + D + +++EY++ ++ AK + + D T ++ N ++ H IVKV+ + G + +P LVYI+REKRP + H KAGAMN Sbjct: 151 LPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYFAAKAAPYAGPALPEEFFGDRRLVRREYEEFKARLDALFTDIPQRSEASVGNANTKGAKATLMADGTPWPGTWTEPAENHKKGQHAGIVKVMLSHPGEEPQLGMPASSGHPLDFSAVDVRLPILVYIAREKRPGYDHQKKAGAMN 377
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.346e-23 Identity = 47/84 (55.95%), Postives = 67/84 (79.76%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 254 +LP +D+FV+TADAE EPP++T NT+LS+L+VDYPV KL+ Y+SDD S + F ++ EA+ FAK+WVPFC+K+ ++ R P YF Sbjct: 202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23 Identity = 75/243 (30.86%), Postives = 115/243 (47.33%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYD-------------------------KLSQNIEHAAKRSSLFDLTGGMTVFSNTE-------------RMNHPTIVKVISENK------GGLSD-----------EIPHLVYISREKRPKHPHHYKAGAMNVL 560 +LP +D+F++TAD EP ++T NT+LS+LA +YPV KL Y+SDD + L F S+ EA FAK+WVPFC+K++++ R P YF +D + +K+EYD KL+++ + A +L + + T + +H +IV+V+ +N G D IP Y+SREKR + H+ KAGAMN + Sbjct: 235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDEFKIRVNSLPDLIRRRANALNARERKLARDKQAAGDADALASVKAATWMADGTHWPGTWLDPSPDHAKGDHASIVQVMIKNPHHDVVYGEAGDHPYLDMTDVDMRIPMFAYLSREKRAGYDHNKKAGAMNAM 477
BLAST of EY680143 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23 Identity = 75/243 (30.86%), Postives = 115/243 (47.33%), Query Frame = 3 Query: 3 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYD-------------------------KLSQNIEHAAKRSSLFDLTGGMTVFSNTE-------------RMNHPTIVKVISENK------GGLSD-----------EIPHLVYISREKRPKHPHHYKAGAMNVL 560 +LP +D+F++TAD EP ++T NT+LS+LA +YPV KL Y+SDD + L F S+ EA FAK+WVPFC+K++++ R P YF +D + +K+EYD KL+++ + A +L + + T + +H +IV+V+ +N G D IP Y+SREKR + H+ KAGAMN + Sbjct: 235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDEFKIRVNSLPDLIRRRANALNARERKLARDKQAAGDADALASVKAATWMADGTHWPGTWLDPSPDHAKGDHASIVQVMIKNPHHDVVYGEAGDHPYLDMTDVDMRIPMFAYLSREKRAGYDHNKKAGAMNAM 477 The following BLAST results are available for this feature:
BLAST of EY680143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680143 ID=EY680143; Name=EY680143; organism=Citrus sinensis; type=EST; length=915bpback to top |