EY680108

Overview
NameEY680108
Unique NameEY680108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.056e-31
Identity = 71/184 (38.59%), Postives = 114/184 (61.96%), Query Frame = 1
Query:   97 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKHIANKALKL 648
            MGL  T L  +   ++E+R+L++GLD AGKTTIL  L   ++    PT GF + T+E + + FT+WD+GGQ  +R  W++YF++T+ +I+VVDS D  R+ E R+ L  +L E++L    +LV ANK D+  A+++ EI+  L +   +  HW I S  A +G  + + + WL+  +  K +KL
Sbjct:    1 MGL-LTILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL--KEIKL 181          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.168e-30
Identity = 80/189 (42.33%), Postives = 115/189 (60.85%), Query Frame = 1
Query:  109 FTKLFSRLFA--KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKHIANKALKLLKS 657
            F    S LF   KK++ I++VGLD +GKTTIL +LK  E  +   +PT+G  V     +N+SF  +D+ GQ K R  W  YF ++QG+IFV+DS+DR R+   +DEL  +L+  ++  R   +++ ANK D+P AM  A+IT  LGL+  R   W I STCA +G+GL + +  LS  I  K L+  KS
Sbjct:    3 FLSSLSNLFGMGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKDVASRGIPVVILANKMDIPGAMTCADITAALGLNLHRSGTWSIHSTCALTGDGLDKAMQQLSSEI-QKYLETRKS 190          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.526e-30
Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 1
Query:  151 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 600
            +++M+GLD AGKTTILYKLK   +V T+PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANKQ+ P+A+   EI ++L L   +   W +++  A +G+GL E
Sbjct:   12 QVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQDHCWELRACSALTGQGLQE 162          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.439e-30
Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 1
Query:  109 FTKLFSRLFA--KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            F    S LF   KK++ I++VGLD +GKTTIL +LK  E  +   +PT+G  V     +N+SF  +D+ GQ K R  W  YF ++QG+IFV+DS+DR R+   +DEL  ++   ++  R   +++ ANK D+P AM A++IT  LGL+  R   W I STCA +G+GL + +  LS  I
Sbjct:    3 FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.093e-28
Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 1
Query:   97 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG 357
            MG  F KLF  L  KK+MRIL++ LD AGKTTILYKLKLGE V  +PT+GF VETVEYKN +F VWDVG   KIRPLW+H+FQNT+G
Sbjct:    1 MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKG 87          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL8_DICDI (ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum GN=arl8 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.181e-28
Identity = 64/169 (37.87%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  121 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKH 624
            F  LF K+EM + +VGL  +GKTT++  +  G  +  TIPTIGFN++ V   N++  +WD+GGQ + R +W  Y +    ++FVVDS DR++  +++  L  ++N+  L    LLV ANK DLPN+    E+   L L  +  R     S  A +   +   LDWL KH
Sbjct:   11 FKSLFWKQEMELTLVGLQGSGKTTLVNVISNGGFIEDTIPTIGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINKPPLAKIPLLVVANKNDLPNSAGVDEMIQNLDLRGIVGREVCCYSISAKNSVNIDITLDWLIKH 179          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.181e-28
Identity = 57/169 (33.73%), Postives = 102/169 (60.36%), Query Frame = 1
Query:  121 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKH 624
            F  LF K+EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR++I  +R+ELH +L++ +L+   +LV  NK+DLPNA++  ++ +K+ L +++ R     S      + +   L WL +H
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQH 180          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.181e-28
Identity = 57/169 (33.73%), Postives = 102/169 (60.36%), Query Frame = 1
Query:  121 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKH 624
            F  LF K+EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR++I  +R+ELH +L++ +L+   +LV  NK+DLPNA++  ++ +K+ L +++ R     S      + +   L WL +H
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQH 180          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.181e-28
Identity = 57/169 (33.73%), Postives = 102/169 (60.36%), Query Frame = 1
Query:  121 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKH 624
            F  LF K+EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++++D+ DR++I  +R+ELH +L++ +L+   +LV  NK+DLPNA++  ++ +K+ L +++ R     S      + +   L WL +H
Sbjct:   12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQH 180          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.181e-28
Identity = 57/169 (33.73%), Postives = 102/169 (60.36%), Query Frame = 1
Query:  121 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSKH 624
            F  LF K+EM + +VGL  +GKTT +  +  G+     IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    ++++VD+ DR+++  +R+ELH +L++ +L+   +LV  NK+DLPNA++  ++ +K+ L +++ R     S      + +   L WL +H
Sbjct:   12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLIQH 180          
The following BLAST results are available for this feature:
BLAST of EY680108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL_SCHPO1.056e-3138.59ADP-ribosylation factor-like protein alp41 OS=Schi... [more]
ARL6_CAEBR1.168e-3042.33ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL11_RAT1.526e-3042.38ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
ARL6_CAEEL4.439e-3041.90ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL17_HUMAN1.093e-2868.97ADP-ribosylation factor-like protein 17 OS=Homo sa... [more]
ARL8_DICDI3.181e-2837.87ADP-ribosylation factor-like protein 8 OS=Dictyost... [more]
ARL8B_RAT3.181e-2833.73ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_MOUSE3.181e-2833.73ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN3.181e-2833.73ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
AR8BA_DANRE3.181e-2833.73ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680108 ID=EY680108; Name=EY680108; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGGTTGTTGTTAAGCTAATAAGCTTCGTCCTCCACCCCCCC
CCTCCGCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCCGGAAGAATGG
GGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAGAGATG
CGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCTTGTA
CAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCATTGGGTTTA
ATGTGGAGACCGTTGAATATAAGAACATCAGTTTCACTGTGTGGGATGTT
GGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTCCAGAACAC
TCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCGTATTGTAG
AAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAGCTGCGAGAT
GCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAAATGCAATGAA
TGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTCCCTCAGGCAGCGCC
ACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAGGGTCTTTATGAA
GGTCTGGATTGGCTCTCCAAACACATCGCTAACAAGGCCCTGAAGCTGTT
AAAATCTTTTTTGCGGACTGGCGATTCTGGATGCAGGGGTGAATAATATC
CATTTTTTTTTCTTTTTAAACCCTTTTTGTTTTGAAAAGGTTGGGGTTGT
TGTGTTGTTTTGGGCCCCTAGATCTTTACAACTTATATTTGGACTAAAAA
AAATTGTTGGGTTTGGAAAAATGGTACCCCCAAGGGTTTTTTGGGCTCCG
TTTTAAAAATTCTGTAAATTTTAAAATAAATTTGGGGGGGCCCCCCCCTA
TTTTTAAATATTGTTTTTTTTTCCCCCATTTGG
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