EY680108

Overview
NameEY680108
Unique NameEY680108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.096e-20
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 1
Query:  142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            K  ++L +GLD AGKTT+L+ LK   +    PT+    E +   N+ FT +D+GG  + R LWR YF    G++++VD  D +R+ E++ EL  +L  +EL     L+  NK D P A++  E+   LGL+             +R    ++ S     G G  EG  WL++++
Sbjct:   19 KHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYG--EGFKWLAQYV 190          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 58/172 (33.72%), Postives = 91/172 (52.91%), Query Frame = 1
Query:  142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            K  ++L +GLD AGKTT+L+ LK   + T  PT     E +   N+ FT +D+GG ++ R +W+ YF    G++++VD  D +R  E+R EL  +L  +EL    +LV  NK D   A++  E+   LGL +            QR   + +      +G  EG+ WLS++I
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKDKVQLVEGQRPLEVFTCSIYLRQGYGEGIRWLSQYI 190          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 59/177 (33.33%), Postives = 94/177 (53.11%), Query Frame = 1
Query:  139 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            +K+ +IL +GLD AGKTT+L+ LK   +V   PT     E +   NI F  +D+GG    R +WR Y+     ++++VD+NDR+R  EA+ EL  +L+++ L +   L+  NK D+P A +  E+   LGL               ++R    ++ S     G G  EG  W+S++I
Sbjct:   18 QKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMGYG--EGFKWMSQYI 192          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            K  ++L +GLD AGKTT+L+ LK   + T  PT     E +   +I FT +D+GG  + R LW+ YF    G++F+VD+ D +R  EAR EL  +    EL+    ++  NK D P+A++  E+   LGL +         QR   +         G  E   WLS++I
Sbjct:   22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = 1
Query:  142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            K  ++L +GLD AGKTT+L+ LK   +    PT     E +   N  FT +D+GG  + R LW+ YF    G++F+VD+ D +   E++ EL  +L  +EL     L+  NK D P+A++  ++  +LGL+            +R    ++ S     G G  EG+ WLS+++
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 58/172 (33.72%), Postives = 92/172 (53.49%), Query Frame = 1
Query:  142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH---WYIQSTCATSGEG------LYEGLDWLSKHIA 630
            +++ +LMVGLD AGKT     ++        PT+GF+   +       T++D+GG  +IR +W++Y+  + G+IFVVDS+D +R+ E ++ +  ML    +    +LV ANKQD   A+  A++ + L L  L   H     I+   A SG G      + +GL WL   IA
Sbjct:   20 RKVTLLMVGLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWLLHVIA 191          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.164e-20
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 1
Query:  142 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            K  ++L +GLD AGKTT+L+ LK   + T  PT     E +   NI FT +D+GG  + R LW+ YF    G++F+VD+ D +R  EAR EL  +    EL +    V  NK D P+A++  E+   LGL +         QR   +         G  E   WLS++I
Sbjct:   22 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMNTTGYTKIEGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = 1
Query:  139 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE++ EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+             L  R   +        +G  EG  WLS++I
Sbjct:   23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 50/175 (28.57%), Postives = 95/175 (54.29%), Query Frame = 1
Query:  139 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG ++ R +W++Y     G++F+VD  D  R+VE++ EL+ ++ ++ + +  +L+  NK D  +A++  ++ +  GL+             L  R   +        +G  EG  WLS++I
Sbjct:   23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197          
BLAST of EY680108 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19
Identity = 48/175 (27.43%), Postives = 94/175 (53.71%), Query Frame = 1
Query:  139 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSKHI 627
            KK  +++ +GLD AGKTT+L+ LK   +   +PT+    E +    ++FT +D+GG  + R +W++Y     G++F+VD  D +R++E+++EL  ++ ++ + +  +L+  NK D P A++   + +  GL+             L  R   +        +G  EG  W++++I
Sbjct:   23 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197          
The following BLAST results are available for this feature:
BLAST of EY680108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAR1_SCHPO1.096e-2032.76Small COPII coat GTPase sar1 OS=Schizosaccharomyce... [more]
SAR1_PICPG1.869e-2033.72Small COPII coat GTPase SAR1 OS=Pichia pastoris (s... [more]
SAR2_SOLLC2.441e-2033.33GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]
SAR1_ASHGO2.441e-2034.32Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN... [more]
SAR1_ASPNG3.188e-2032.37Small COPII coat GTPase SAR1 OS=Aspergillus niger ... [more]
AR13B_HUMAN3.188e-2033.72ADP-ribosylation factor-like protein 13B OS=Homo s... [more]
SAR1_KLULA4.164e-2035.50Small COPII coat GTPase SAR1 OS=Kluyveromyces lact... [more]
SAR1A_PONAB1.582e-1928.57GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN1.582e-1928.57GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]
SAR1B_MOUSE2.067e-1927.43GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-E06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680108 ID=EY680108; Name=EY680108; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGGTTGTTGTTAAGCTAATAAGCTTCGTCCTCCACCCCCCC
CCTCCGCTCTCTCTCGCGTTCTCTGAAGTGATCCCCAGCCGGAAGAATGG
GGCTGACTTTCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAGAGATG
CGAATTCTAATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCTTGTA
CAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCCTACCATTGGGTTTA
ATGTGGAGACCGTTGAATATAAGAACATCAGTTTCACTGTGTGGGATGTT
GGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCATTATTTCCAGAACAC
TCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAGAGACCGTATTGTAG
AAGCAAGGGATGAATTGCATAGGATGTTGAATGAGGATGAGCTGCGAGAT
GCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTTCCAAATGCAATGAA
TGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTCCCTCAGGCAGCGCC
ACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAGGGTCTTTATGAA
GGTCTGGATTGGCTCTCCAAACACATCGCTAACAAGGCCCTGAAGCTGTT
AAAATCTTTTTTGCGGACTGGCGATTCTGGATGCAGGGGTGAATAATATC
CATTTTTTTTTCTTTTTAAACCCTTTTTGTTTTGAAAAGGTTGGGGTTGT
TGTGTTGTTTTGGGCCCCTAGATCTTTACAACTTATATTTGGACTAAAAA
AAATTGTTGGGTTTGGAAAAATGGTACCCCCAAGGGTTTTTTGGGCTCCG
TTTTAAAAATTCTGTAAATTTTAAAATAAATTTGGGGGGGCCCCCCCCTA
TTTTTAAATATTGTTTTTTTTTCCCCCATTTGG
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