EY744822

Overview
NameEY744822
Unique NameEY744822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length992
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744822 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.233e-13
Identity = 37/109 (33.94%), Postives = 56/109 (51.38%), Query Frame = 1
Query:  190 NATSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYKDFAAALPENDCRYAVYDFDYVTSE-----------NCQKNKILFIAWAPSNRSARDK 483
            NATSG+ V++  K  F EL+  + HR+V+FKID           G     + +  A+LP + CRYAVYD D+  S+              ++KI F++W+P+    R K
Sbjct:    3 NATSGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSK 111          
BLAST of EY744822 vs. ExPASy Swiss-Prot
Match: COFI_YARLI (Cofilin OS=Yarrowia lipolytica GN=COF1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.021e-11
Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  199 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYKDFAAALPENDCRYAVYDFDY-VTSENCQKNKILFIAWAPSNRSARDK 483
            SG+ V D +  AF EL+  K   ++I+KI+           G   +SY  F   LPENDCRYAVYDF+Y ++S   +++K++F  W+P     R K
Sbjct:   14 SGVAVNDSALQAFNELKLGKKVTFIIYKINDAKTEIVVEEEG-TTDSYDTFLGKLPENDCRYAVYDFEYEISSGEGKRSKLVFFTWSPDTAPVRSK 108          
BLAST of EY744822 vs. ExPASy Swiss-Prot
Match: COFI_ZYGRO (Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.333e-11
Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  199 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYKDFAAALPENDCRYAVYDFDY-VTSENCQKNKILFIAWAPSNRSARDK 483
            SG+ VAD S  AF +L+  K +++V++ I           T   ++SY +F   LPENDC YA+YDF+Y +     +++KI+F  W+P     R K
Sbjct:    4 SGVSVADESLQAFNDLKLGKKYKFVLYGISEDKTTIVVKETS-TSQSYDEFLGKLPENDCLYAIYDFEYEIGGNEGKRSKIVFFTWSPDTAPVRSK 98          
BLAST of EY744822 vs. ExPASy Swiss-Prot
Match: COFI_KLULA (Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.741e-11
Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 1
Query:  199 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYKDFAAALPENDCRYAVYDFDYVTSEN-CQKNKILFIAWAPSNRSARDK 483
            SG+ VAD S NAF +L+  K ++++++ ++          T    + Y  F   LPENDC YAVYDF+Y    N  +++KI+F  W+P     R K
Sbjct:    4 SGVAVADESLNAFNDLKLGKKYKFILYALNDSKTEIIVKETSAE-QDYDKFLEQLPENDCLYAVYDFEYELGNNEGKRSKIVFFTWSPDTAPVRSK 98          
BLAST of EY744822 vs. ExPASy Swiss-Prot
Match: COFI_CANGA (Cofilin OS=Candida glabrata GN=COF1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.741e-11
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  199 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYKDFAAALPENDCRYAVYDFDYVTSEN-CQKNKILFIAWAPSNRSARDK 483
            SG+ VAD S  AF +L+    +++V+F ++          T     SY  F   LPENDC YAVYDF+Y  SE+  +++KI+F  W+P   S R K
Sbjct:    4 SGVAVADESIQAFNDLKLGMKYKFVLFSLNDAKTEIVVKETSSDP-SYDAFLEKLPENDCLYAVYDFEYQISESEGKRSKIVFFTWSPDTASVRPK 98          
BLAST of EY744822 vs. ExPASy Swiss-Prot
Match: COFI_PICAN (Cofilin OS=Pichia angusta GN=COF1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.970e-11
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 1
Query:  199 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYKDFAAALPENDCRYAVYDFDY-VTSENCQKNKILFIAWAPSNRSARDK 483
            SG+ V+D +  AF +L+  K  + +I+K++          T    ++Y  F   LPENDCRYAVYDF+Y V   + ++NKI+F  W+P   S R K
Sbjct:    4 SGVAVSDEALKAFNDLKLGKKFKSIIYKLNDAKTEIVVDSTS-TEDAYDAFVEDLPENDCRYAVYDFEYEVGQGDGKRNKIVFYQWSPDTASVRAK 98          
The following BLAST results are available for this feature:
BLAST of EY744822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
ADF3_ORYSJ9.233e-1333.94Actin-depolymerizing factor 3 OS=Oryza sativa subs... [more]
COFI_YARLI1.021e-1138.54Cofilin OS=Yarrowia lipolytica GN=COF1 PE=3 SV=1[more]
COFI_ZYGRO1.333e-1136.46Cofilin OS=Zygosaccharomyces rouxii GN=cof1 PE=2 S... [more]
COFI_KLULA1.741e-1136.46Cofilin OS=Kluyveromyces lactis GN=COF1 PE=3 SV=1[more]
COFI_CANGA1.741e-1139.58Cofilin OS=Candida glabrata GN=COF1 PE=3 SV=1[more]
COFI_PICAN2.970e-1138.54Cofilin OS=Pichia angusta GN=COF1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-003-H12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744822 ID=EY744822; Name=EY744822; organism=Citrus sinensis; type=EST; length=992bp
CCCGCGTCCGCTTTTCTTTAAAAATCTTCTTTCTTTTTTTTAATTATTAC
GTATAAAACTAGGCCACTTCTTTTAGTTTTATTCTGAGCACAATACATTT
TCGCTCTCTTTCATTGTTTATTTACTTGCTCTGGTGATCTGCGTTCTGTT
GCTGCCGCCGCCATGTCTTTCAGAGGACTAAGTCGACCAAATGCCACTTC
TGGCATGGGCGTTGCTGATCACAGCAAAAATGCATTCACGGAATTGCAAA
GGAAGAAGGTTCACCGTTATGTGATTTTTAAGATTGATGAGAAGAAAAAG
GAGGTTGTGGTTGAGAAGACTGGTGGCCCCGCTGAGAGCTACAAGGATTT
CGCTGCTGCTTTGCCTGAGAATGATTGTCGATATGCTGTATATGACTTTG
ACTATGTGACTTCTGAGAATTGTCAGAAGAACAAGATACTCTTCATTGCA
TGGGCCCCTTCAAACCGCTCAGCCCGTGACAAGAATGCCGGACGCACAGT
CTGAACGAACAGACTTCAAGGGAAAGCAAGCATGACACCAACCAGGAAAT
TGCGCCCAAACGACCCGAACACGACCGGCAACCACACANACAACANAACA
CCACCGCGCACACCCACCAATACCGTACCCCGCGCAACCAACACAACACA
GACNCAGTCATCAGGCGTTTCCCGACAACATATGCAGGAGAACACAAAAC
CACCCACACACACCACCCCACACCCACAACAACCACANCGCCCGACGACG
ACACCCACACACCAACACCCCCACCACAACACCCCGCGTCGCGTGCGGCG
GCCGCCGACACCCCAACGCGACCACGACCCCGAGACGAAGAGGCCGCCAC
ACAAGAAAAAAAAACCCGCAGCCACACCCGCCGCCACAGAAAAGCCAAAA
CCCCCGGCGCAGGAGGCACGAGCCAACCACGCGTGCGCCCCACCAAACGC
AGCACACCGCCCCGCCCCTAACCGAAGCACAACGAAGCACGA
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