EY680101

Overview
NameEY680101
Unique NameEY680101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_RHOPB (GTPase obg OS=Rhodopseudomonas palustris (strain BisB18) GN=obg PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.636e-23
Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D AK+++++G GGNG VAFRREKY+              +V +EV + +N+L+ +R   HF+A +G++G G+ + GA G+D+V+KV  GT I +  +  ++
Sbjct:    1 MKFLDEAKVYIRSGDGGNGCVAFRREKYIEFGGPSGGNGGRGGDVIIEVADGLNTLIDYRYQQHFKAQKGTNGMGKDRHGANGKDIVLKVPVGTQILDEDRETLI 105          

HSP 2 Score: 43.1282 bits (100), Expect = 1.636e-23
Identity = 20/42 (47.62%), Postives = 25/42 (59.52%), Query Frame = 3
Query:  546 FVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            FV      GG GNA FKS T  APR A  G++G E W+ +R+
Sbjct:  115 FVLAEGGNGGFGNAHFKSSTNRAPRNANPGQEGEERWIWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_CAUSK (GTPase obg OS=Caulobacter sp. (strain K31) GN=obg PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.274e-22
Identity = 42/105 (40.00%), Postives = 63/105 (60.00%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D+ KI+V++G GG G V+FRREKY+              +V++E  E +N+L+ +R   HF+AG G HG GR + GA G DV++KV  GT + E  K  ++
Sbjct:    1 MKFLDQCKIYVRSGNGGGGAVSFRREKYIEYGGPDGGDGGRGGDVWIEAVEGLNTLIDYRYQQHFKAGTGVHGMGRGRHGAAGDDVLLKVPVGTQVLEEDKETLI 105          

HSP 2 Score: 37.3502 bits (85), Expect = 2.274e-22
Identity = 19/41 (46.34%), Postives = 24/41 (58.54%), Query Frame = 3
Query:  558 RVAKGGTG---NASFKSGTK*APRIAENGEKGPELWVGIRI 671
            R+AKGG G   N  FK     AP+ A  G+ G ELWV +R+
Sbjct:  116 RLAKGGNGGWGNLHFKGPVNQAPKYANPGQDGEELWVWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_OLICO (GTPase obg OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=obg PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.959e-22
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D AK+++++G GGNG VAFRREK++              +V +E  + +N+L+ +R   HF+A +G HG G  + GA G D+V+KV  GT + +  +  +L
Sbjct:    1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEYGGPNGGNGGRGGDVIIETVDGLNTLIDYRYQQHFKAQKGGHGMGSDRHGAGGDDIVLKVPVGTQVFDEDRETLL 105          

HSP 2 Score: 42.743 bits (99), Expect = 2.959e-22
Identity = 20/42 (47.62%), Postives = 25/42 (59.52%), Query Frame = 3
Query:  546 FVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            FV  +   GG GNA FKS T  APR A  G+ G E W+ +R+
Sbjct:  115 FVIAKGGNGGFGNAHFKSSTNRAPRHANPGQPGEERWIWLRM 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_BRAJA (GTPase obg OS=Bradyrhizobium japonicum GN=obg PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.961e-22
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D AK+++++G GGNG VAFRREK++              NV +EV + +N+L+ +R   HF+A +G +G G  + GA G+++V+KV  GT I +  +  ++
Sbjct:    1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPSGGNGGRGGNVIIEVADGLNTLIDYRYQQHFKAQKGENGAGSDRHGANGKNIVLKVPMGTQIFDEDRETLI 105          

HSP 2 Score: 42.743 bits (99), Expect = 2.961e-22
Identity = 22/46 (47.83%), Postives = 27/46 (58.70%), Query Frame = 3
Query:  534 GQKAFVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            G+K FV      GG GNA FKS T  APR A  G+ G E W+ +R+
Sbjct:  112 GEK-FVLAEGGNGGFGNAHFKSSTNRAPRNANPGQPGEERWIWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_THEYD (GTPase obg OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=obg PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.854e-22
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D  KI+VKAG GG G ++FRREKYVP             +V ++    +++LL  R    ++A RG HG+G    G  G+++++KV  GTV+++A   +VL
Sbjct:    1 MQFIDYVKIYVKAGDGGRGCISFRREKYVPKGGPDGGDGGKGGDVIIQASSELHTLLDHRYQKVYKAQRGQHGKGSNMKGKDGENLIIKVPVGTVVKDAETEEVL 105          

HSP 2 Score: 44.2838 bits (103), Expect = 3.854e-22
Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 3
Query:  537 QKAFVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWV 659
            +K F+  +  +GG GNA F + T  APR A+ GEKG E WV
Sbjct:  112 EKYFIVAKGGRGGFGNAHFATPTNQAPRYAQPGEKGQERWV 152          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_HERA2 (GTPase obg OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=obg PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.987e-22
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVI 487
            DRA I VKAG GG+G+  FRREKYVP             +VY+EV   +N+LLPFR   HF A +G +   + + G  G+D  ++V PGT++
Sbjct:    6 DRALITVKAGDGGDGMATFRREKYVPRGGPDGGDGGRGGSVYLEVSPHLNTLLPFRFETHFEADKGLNAGRQRKRGRTGEDTFIRVPPGTIV 97          

HSP 2 Score: 42.3578 bits (98), Expect = 4.987e-22
Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 3
Query:  519 ELLVPGQKAFVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPE 650
            +LL PGQK  VA R  KGG GN  F + +   PRIAE G+ G E
Sbjct:  109 DLLFPGQKLLVA-RGGKGGLGNTHFATASNQVPRIAELGQPGEE 151          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_RHOPS (GTPase obg OS=Rhodopseudomonas palustris (strain BisB5) GN=obg PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.103e-21
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D AK+++++G GGNG VAFRREK++              +V VE  + +N+L+ +R   HF+A +G +G G  + GA G+D+V+KV  GT I +  K  +L
Sbjct:    1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDVVVEAADGLNTLIDYRYQQHFKAQKGVNGMGSDRHGANGKDIVLKVPVGTQIIDEDKETLL 105          

HSP 2 Score: 40.4318 bits (93), Expect = 1.103e-21
Identity = 20/42 (47.62%), Postives = 23/42 (54.76%), Query Frame = 3
Query:  546 FVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            FV      GG GNA FKS T  APR A  G  G E W+ +R+
Sbjct:  115 FVLAEGGNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_SYNWW (GTPase obg OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=obg PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPGGQRG 574
            D+A+IFVK G GGNG+VAFRREKYVPM            NV +  DE + +L+ F+   HF+A RG+HGQG+   GA GQD+ VKV  GTVI++    +VL  ++    E +    GG+ G
Sbjct:    4 DQARIFVKGGDGGNGIVAFRREKYVPMGGPSGGDGGRGANVILVADEGLKTLMDFKYRRHFKAERGAHGQGKNMHGAWGQDLRVKVPVGTVIKDDESGEVLADLLLQGQEAVVA-KGGRGG 123          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_PELCD (GTPase obg OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=obg PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.435e-21
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  DR KI VKAG GG G ++FRREK++P             N+ + VDE + +LL  R  +H++A RG+HG G+   G  G+D+ ++V PG ++ +A   ++L
Sbjct:    1 MKFIDRVKIHVKAGDGGRGCLSFRREKFIPKGGPDGGDGGRGGNIVLRVDEGLGTLLDLRYQIHYKAQRGAHGMGKNCHGKNGEDLEIRVPPGVLVYDAETDELL 105          

HSP 2 Score: 35.039 bits (79), Expect = 1.435e-21
Identity = 18/49 (36.73%), Postives = 24/49 (48.98%), Query Frame = 3
Query:  525 LVPGQKAFVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            L  G    V  R   GG GNA F + T  APR  + G +G E W+ + +
Sbjct:  108 LTEGCHELVVVRGGMGGRGNARFATSTNRAPRHVQPGVEGEERWLRLEL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_RHOPT (GTPase obg OS=Rhodopseudomonas palustris (strain TIE-1) GN=obg PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.435e-21
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            M+  D AK+++++G GGNG VAFRREK++              ++ VE  + +N+L+ +R   HF+A +G +G G  + GA G+D+V+KV  GT I +  K  ++
Sbjct:    1 MKFLDEAKVYIRSGDGGNGCVAFRREKFIEFGGPNGGNGGRGGDIIVEAADGLNTLIDYRYQQHFKAQKGGNGMGSDRHGAGGKDIVMKVPVGTQIFDEDKETLI 105          

HSP 2 Score: 41.2022 bits (95), Expect = 1.435e-21
Identity = 20/42 (47.62%), Postives = 24/42 (57.14%), Query Frame = 3
Query:  546 FVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            FV  +   GG GNA FKS T  APR A  G  G E W+ +R+
Sbjct:  115 FVLAKGGNGGFGNAHFKSSTNRAPRHANPGLPGEERWIWLRL 156          
The following BLAST results are available for this feature:
BLAST of EY680101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OBG_RHOPB1.636e-2337.14GTPase obg OS=Rhodopseudomonas palustris (strain B... [more]
OBG_CAUSK2.274e-2240.00GTPase obg OS=Caulobacter sp. (strain K31) GN=obg ... [more]
OBG_OLICO2.959e-2236.19GTPase obg OS=Oligotropha carboxidovorans (strain ... [more]
OBG_BRAJA2.961e-2236.19GTPase obg OS=Bradyrhizobium japonicum GN=obg PE=3... [more]
OBG_THEYD3.854e-2237.14GTPase obg OS=Thermodesulfovibrio yellowstonii (st... [more]
OBG_HERA24.987e-2243.48GTPase obg OS=Herpetosiphon aurantiacus (strain AT... [more]
OBG_RHOPS1.103e-2138.10GTPase obg OS=Rhodopseudomonas palustris (strain B... [more]
OBG_SYNWW1.166e-2145.45GTPase obg OS=Syntrophomonas wolfei subsp. wolfei ... [more]
OBG_PELCD1.435e-2138.10GTPase obg OS=Pelobacter carbinolicus (strain DSM ... [more]
OBG_RHOPT1.435e-2136.19GTPase obg OS=Rhodopseudomonas palustris (strain T... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-D11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680101 ID=EY680101; Name=EY680101; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGGGCTAGGTGGTAATTTAGGGCTCAGTTACGGGCAATTCG
AAATATTCGAAGGAGAAGAAGGAGAAGACGAAGACAAATACAGCAGCGAA
AATGAAGACGGTGGAAAAATTGAAAATTTTGATAAGGAGAATGGCTATTA
TGAAGGCGAACTGGAAGAAGATGTGAAAGAGAAGGGAGTGCCAGCAGTAA
TGCGATGCTTCGACCGGGCGAAGATTTTCGTAAAAGCAGGGACCGGTGGA
AACGGCGTCGTGGCTTTTAGACGCGAGAAGTACGTGCCGATGGGTGGGCC
CTCTGGAGGCGATGGAGGGAGAGGCGGGAATGTATACGTCGAAGTTGATG
AATCCATGAATTCCTTACTGCCGTTTCGCAACAGTGTGCATTTTCGGGCC
GGGAGAGGAAGTCATGGGCAGGGGCGGATGCAGAGCGGGGCTAAGGGACA
GGATGTAGTGGTTAAGGTGGCGCCAGGGACAGTTATTAGAGAGGCTGGAA
AATCGAAGGTTTTGTTGGGAATTATTGGTTCCAGGGCAGAAGGCATTTGT
TGCTGGCCGGGTGGCCAAAGGGGGTACAGGAAACGCATCGTTTAAAAGTG
GAACGAAATAGGCCCCGAGAATTGCTGAAAATGGTGAAAAAGGTCCTGAA
TTGTGGGTGGGAATTCGAATTTGGACCTAGACGCGAGGGTTGGAATGGCG
GGGTGCGCCCAAAGGCGACCAGAACAACCCCTTTGAACGTGAATAAGCGT
TGCCCCACCCACACCCGCCATTCTCCCCCTTACCCCTTTCTCCCCACCCC
CCCGGGCGGCTTACATTTCCGGTAAGTTGGCCCGCAGGGGGAAGAACGGA
CTCTGGCGAGGATAGCGGGAGG
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