EY680101

Overview
NameEY680101
Unique NameEY680101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_NOVAD (GTPase obg OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=obg PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 9.640e-20
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGI 523
            M   D+AKIF+++G GG G V+FRREKYV              ++  E    +N+L+ FR + HF+A RG  G G+ ++GA G D+V+KV  GT + +  +  VLL +
Sbjct:    1 MHFLDQAKIFIRSGQGGPGAVSFRREKYVEYGGPDGGDGGKGGDIIFEAVTGLNTLIDFRYAQHFKAQRGHGGAGKNRTGAGGNDLVIKVPVGTQVLDDDRETVLLDL 108          

HSP 2 Score: 34.6538 bits (78), Expect = 9.640e-20
Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 3
Query:  519 ELLVPGQKAFVAGRVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            +L   GQ+  +  R   GG GNAS+K+ T  APR    G  G E++V +R+
Sbjct:  107 DLTEAGQREILL-RGGDGGRGNASYKTSTNRAPRQHGPGWPGEEMYVWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_DESAP (GTPase obg OS=Desulforudis audaxviator (strain MP104C) GN=obg PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVL 514
            D AKI VKAG GGNG VAFRREKYVP             +V +  D  + +L+ FR   H++AGRG+HGQG+   G KG+D+V++V  GT +R AG + ++
Sbjct:    4 DYAKIHVKAGDGGNGCVAFRREKYVPYGGPSGGDGGRGGHVILRADGGLRTLVDFRYRTHYKAGRGTHGQGKNMHGRKGEDLVLRVPVGTEVRRAGDATLM 104          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_BACLD (GTPase obg OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=obg PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-19
Identity = 50/121 (41.32%), Postives = 70/121 (57.85%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPGGQRG 574
            D+ KI+VK G GGNG+VAFRREKYVP             +V  +VDE +++L+ FR   HF+A RG HG  + Q G   +D+VVKV PGTV+ +    +V+  +     E +    GG+ G
Sbjct:    4 DQVKIYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFKVDEGLSTLMDFRYQRHFKAARGEHGMSKNQHGRNAEDMVVKVPPGTVVIDDDTKQVIADLTEHGQEAVIA-KGGRGG 123          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_METPB (GTPase obg OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=obg PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.254e-19
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGT-VIREAGKSKV 511
            M+  D AK++V++G GG G V+FRREK++              +V++E  + +N+L+ +R   HF+A +G HG G    GAKG D V++V  GT V  E G++ +
Sbjct:    1 MKFLDEAKVYVRSGDGGPGCVSFRREKFIEFGGPNGGDGGRGGDVWIECVQGLNTLIDYRYRQHFKARKGEHGMGSNCHGAKGDDAVLQVPAGTQVFAEDGETLI 105          

HSP 2 Score: 38.1206 bits (87), Expect = 1.254e-19
Identity = 19/41 (46.34%), Postives = 27/41 (65.85%), Query Frame = 3
Query:  558 RVAKGGTG---NASFKSGTK*APRIAENGEKGPELWVGIRI 671
            R+AKGG G   NA F + T  APR A  G++G E+W+ +R+
Sbjct:  116 RLAKGGNGGFGNAYFTTSTNRAPRHANPGQEGQEMWLILRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_OCHA4 (GTPase obg OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=obg PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.632e-19
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGI--IGSR 535
            M+  D+AKI++++G GG G V+FRREK++              +V+VE    +N+L+ +R   HFRA  G HG GR  +G KG DV++KV  GT I E     ++  I  IG R
Sbjct:    1 MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVNGLNTLIDYRYQQHFRAKTGMHGMGRNMTGGKGDDVILKVPVGTQIFEEDDETLICDITEIGQR 114          

HSP 2 Score: 30.8018 bits (68), Expect = 1.632e-19
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3
Query:  558 RVAKGGTG---NASFKSGTK*APRIAENGEKGPELWVGIRI 671
            R+AKGG G   N  F + T  APR A  G++G E  + +R+
Sbjct:  116 RLAKGGNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_GLUOX (GTPase obg OS=Gluconobacter oxydans GN=obg PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.632e-19
Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPGGQRG 574
            M+  D+AKI+V++G GG+GV+AFRREKY+              ++       +N+L+ FR + HF+A +G +G G  ++GA   +V + V  GT I +  +  +L  +     E + C  GG  G
Sbjct:    1 MKFLDQAKIYVRSGDGGDGVIAFRREKYIEFGGPDGGDGGRGGDIIFRAVPGLNTLIDFRYTQHFKARKGGNGAGSNRTGAAAANVTINVPVGTQIFDEDRETLLADLDAEGKEVLLC-RGGDGG 124          

HSP 2 Score: 39.2762 bits (90), Expect = 1.632e-19
Identity = 19/38 (50.00%), Postives = 22/38 (57.89%), Query Frame = 3
Query:  558 RVAKGGTGNASFKSGTK*APRIAENGEKGPELWVGIRI 671
            R   GG GN  FKS T  APR A+ G  G E WV +R+
Sbjct:  119 RGGDGGLGNTHFKSSTNRAPRRADKGWPGEERWVWLRL 156          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_CHLPB (GTPase obg OS=Chlorobium phaeobacteroides (strain BS1) GN=obg PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.175e-19
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 2
Query:  200 MRCFDRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPGGQRG 574
            M+  D AKI+VK G GGNG ++FRREKYVP             +VY+  D  M++LL FR   H+ A RG HGQG  ++G  G+D V+ V  GTV+R A     L+  +    E +    GG+ G
Sbjct:    1 MKFVDSAKIYVKGGNGGNGCMSFRREKYVPKGGPDGGDGGRGGHVYLRADGQMSTLLDFRYKKHYEAQRGVHGQGSKKNGKMGKDTVIPVPCGTVVRNAADGS-LIADLTEEGEELLVAEGGKGG 124          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_BACWK (GTPase obg OS=Bacillus weihenstephanensis (strain KBAB4) GN=obg PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.175e-19
Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPG-GQRG 574
            D+ KI+VK G GGNG+VA+RREKYVP             +V   V+E + +L+ FR   HF+A RG HG  + Q G K +D++VKV PGT++++    ++L  ++      +    G G RG
Sbjct:    4 DQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQRHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGEILADLVTHEQTAVIARGGRGGRG 125          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_BACC2 (GTPase obg OS=Bacillus cereus (strain G9842) GN=obg PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.175e-19
Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPG-GQRG 574
            D+ KI+VK G GGNG+VA+RREKYVP             +V   V+E + +L+ FR   HF+A RG HG  + Q G K +D++VKV PGT++++    ++L  ++      +    G G RG
Sbjct:    4 DQVKIYVKGGDGGNGMVAYRREKYVPKGGPAGGDGGKGADVVFVVEEGLRTLMDFRYQRHFKADRGQHGMSKGQHGRKSEDLIVKVPPGTIVKDEKTGQILADLVTHEQTAVIARGGRGGRG 125          
BLAST of EY680101 vs. ExPASy Swiss-Prot
Match: OBG_HALOH (GTPase obg OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=obg PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.147e-19
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 2
Query:  212 DRAKIFVKAGTGGNGVVAFRREKYVPMXXXXXXXXXXXXNVYVEVDESMNSLLPFRNSVHFRAGRGSHGQGRMQSGAKGQDVVVKVAPGTVIREAGKSKVLLGIIGSRAEGICCWPG-GQRG 574
            D  +I VK G GGNGVV+FRREK+ PM            NV + VDE +N+L  FR   H+ A RG HG G+ + G  G+D+V+KV PGTV+ +A   ++L  +     E I    G G RG
Sbjct:    4 DEVEIKVKGGQGGNGVVSFRREKFEPMGGPDGGDGGDGGNVILRVDEGLNTLADFRYQRHYEAERGYHGSGKNKHGRSGEDLVLKVPPGTVVYDADTDELLADLTEDGEEYIVAHGGKGGRG 125          
The following BLAST results are available for this feature:
BLAST of EY680101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OBG_NOVAD9.640e-2038.89GTPase obg OS=Novosphingobium aromaticivorans (str... [more]
OBG_DESAP1.091e-1946.53GTPase obg OS=Desulforudis audaxviator (strain MP1... [more]
OBG_BACLD1.091e-1941.32GTPase obg OS=Bacillus licheniformis (strain DSM 1... [more]
OBG_METPB1.254e-1937.14GTPase obg OS=Methylobacterium populi (strain ATCC... [more]
OBG_OCHA41.632e-1939.47GTPase obg OS=Ochrobactrum anthropi (strain ATCC 4... [more]
OBG_GLUOX1.632e-1932.80GTPase obg OS=Gluconobacter oxydans GN=obg PE=3 SV... [more]
OBG_CHLPB3.175e-1940.80GTPase obg OS=Chlorobium phaeobacteroides (strain ... [more]
OBG_BACWK3.175e-1938.52GTPase obg OS=Bacillus weihenstephanensis (strain ... [more]
OBG_BACC23.175e-1938.52GTPase obg OS=Bacillus cereus (strain G9842) GN=ob... [more]
OBG_HALOH4.147e-1942.62GTPase obg OS=Halothermothrix orenii (strain H 168... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-D11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680101 ID=EY680101; Name=EY680101; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGGGCTAGGTGGTAATTTAGGGCTCAGTTACGGGCAATTCG
AAATATTCGAAGGAGAAGAAGGAGAAGACGAAGACAAATACAGCAGCGAA
AATGAAGACGGTGGAAAAATTGAAAATTTTGATAAGGAGAATGGCTATTA
TGAAGGCGAACTGGAAGAAGATGTGAAAGAGAAGGGAGTGCCAGCAGTAA
TGCGATGCTTCGACCGGGCGAAGATTTTCGTAAAAGCAGGGACCGGTGGA
AACGGCGTCGTGGCTTTTAGACGCGAGAAGTACGTGCCGATGGGTGGGCC
CTCTGGAGGCGATGGAGGGAGAGGCGGGAATGTATACGTCGAAGTTGATG
AATCCATGAATTCCTTACTGCCGTTTCGCAACAGTGTGCATTTTCGGGCC
GGGAGAGGAAGTCATGGGCAGGGGCGGATGCAGAGCGGGGCTAAGGGACA
GGATGTAGTGGTTAAGGTGGCGCCAGGGACAGTTATTAGAGAGGCTGGAA
AATCGAAGGTTTTGTTGGGAATTATTGGTTCCAGGGCAGAAGGCATTTGT
TGCTGGCCGGGTGGCCAAAGGGGGTACAGGAAACGCATCGTTTAAAAGTG
GAACGAAATAGGCCCCGAGAATTGCTGAAAATGGTGAAAAAGGTCCTGAA
TTGTGGGTGGGAATTCGAATTTGGACCTAGACGCGAGGGTTGGAATGGCG
GGGTGCGCCCAAAGGCGACCAGAACAACCCCTTTGAACGTGAATAAGCGT
TGCCCCACCCACACCCGCCATTCTCCCCCTTACCCCTTTCTCCCCACCCC
CCCGGGCGGCTTACATTTCCGGTAAGTTGGCCCGCAGGGGGAAGAACGGA
CTCTGGCGAGGATAGCGGGAGG
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